Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma03g00209 ATGGAAGCCAAAGGTTTCACTCTTGATGGAACTGTTGATATTCGTGGGCGACCCGTGCTTGCTTCTAAGACTGGGAAATGGAAAGCTTGTGCCTTTCTTGTTGGTTATGAAGCATTTGAAAGGATGGCATTTTATGGAATAGCCTCCAATTTAGTGAATTACTTGACTACCCAACTTCACGAAGACACAGTTTCATCGGTCAGAAATGTGAACAACTGGTCGGGATCTATATGGATTACACCAATTGCCGGTGCATATATATCAGACTCATTCATTGGTCGGTTTTGGACTTTCACTGTATCATCAAATATATACGTCCTGGGGATGATCCTACTAACAATGGCAGTTTCTCTTAAAAGCTTGAAGCCTACATGTACAAATGGAGTTTGCAACAAGGCCACCAGTTTACAGATTTCTTTCTTCTACATGTCTCTGTACATAATAGCTATTGGAGCGGGTGGAACAAAACCCAACATATCCACTTTTGGTGCAGATCAGTTTGACGACTTTGACCCGTCTGAAAAAACACTAAAGGTTTCCTTCTTCAACTGGTGGATGTTCAGCACCTTCTTTGGGGCCTTATGTGCTACCTCTGGCCTTGTCTACATTCAAGAGAATTTGGGATGGGGGTTGGGGTATGGTATCCCTACTGTAGGTCTGCTGTTATCCTTGGTTATTTTCTACATAGGAACTCCAATTTACAGGCACAAAGTTAGGAGGACGAAAAGCCCGACAAACGACTTAATTCAAGTGCTCATAACAGCATTCAGAAATCGAAACCTGCAGCTTCCTAATAGATCCACAGATTTGCATGAGTTTGAGCCCCAACATTACATCAGCACCGGAAAGCGGCAGGTTCATCACACCCCTATTTTCAGGTTCTTGGACAAGGCTGCTGTAAAAGTGGAGGGCATAGCTGGGTCAGCAAAGCCACCATGCACGGTGACCCAGGTGGAAGGAACTAAGCTCATTTTGGGGATGTTGGTAACCTTAATACCTAGCACCATTTGGGCTCAAATTAATACCCTCTTTGTCAAACAAGGTACAACCTTAAACAGAAGCCTGATCCAAAGTTTTCAAATTCCAGCTGCTTCTCTTGGGTGTGATGGGTCAATCCTACTGGACGACACATCGAGCTTCACTGGGGAGAAGACTGCCAATCCGAACCGAAACTCGGCCCGGGGGTTTGATGTCATTGACAACATAAAATCGGCGGTGGAGAAGGCTTGCCCCGGCGTGGTTTCATGCGCTGATGTACTGGCTATTTCCGCTCGTGACTCTGTTGCCATCCTGAAAGGCCCAAGCTGGAACGTAAAACTTGGAAGAAGAGACTCTAGGACAGCAAGCTTATCTGCCGCCAACAATGGCATCCCGGCTCCAAATTCTAGTCTAAGCCAGCTCATGTCAAGATTCAGTGCTCTAGGCCTTTCTACTACAGACTTGGTCGCTTTGTCTGGTTCTCACACCATTGGACTAGCGAGGTGCACAACCTTCAGAACGCACATATACAGCGAATCCAACATCGACCCTTCCTTCGCCCAGACAAGACAGTCCAACTGCCCGAGAGCTTCAGGCTCGGGGGACAACAATCTGGCTCCTCTCGACCTTCAAACTCCCACTGCGTTTGACAACGCATACTTCCAAAACCTCGTCCAGAAGAAGGGTCTCCTCCACTCCGATCAAGAATTGTTCAACGGTGGCTCCACTGACTCTTTGGTGCGTAGCTACAGCGGCGGTAAAAACTCTTTCTTCTCTGCTTTTGCTTCTGCAATGATCAAGATGGGAGATATCAGCCCCCTTACTGGATCAAACGGTGAGATCAGGAAGAACTGCAGGAGACCTAACTAA 1848 46.65 MEAKGFTLDGTVDIRGRPVLASKTGKWKACAFLVGYEAFERMAFYGIASNLVNYLTTQLHEDTVSSVRNVNNWSGSIWITPIAGAYISDSFIGRFWTFTVSSNIYVLGMILLTMAVSLKSLKPTCTNGVCNKATSLQISFFYMSLYIIAIGAGGTKPNISTFGADQFDDFDPSEKTLKVSFFNWWMFSTFFGALCATSGLVYIQENLGWGLGYGIPTVGLLLSLVIFYIGTPIYRHKVRRTKSPTNDLIQVLITAFRNRNLQLPNRSTDLHEFEPQHYISTGKRQVHHTPIFRFLDKAAVKVEGIAGSAKPPCTVTQVEGTKLILGMLVTLIPSTIWAQINTLFVKQGTTLNRSLIQSFQIPAASLGCDGSILLDDTSSFTGEKTANPNRNSARGFDVIDNIKSAVEKACPGVVSCADVLAISARDSVAILKGPSWNVKLGRRDSRTASLSAANNGIPAPNSSLSQLMSRFSALGLSTTDLVALSGSHTIGLARCTTFRTHIYSESNIDPSFAQTRQSNCPRASGSGDNNLAPLDLQTPTAFDNAYFQNLVQKKGLLHSDQELFNGGSTDSLVRSYSGGKNSFFSAFASAMIKMGDISPLTGSNGEIRKNCRRPN 615
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1581454 1587244 - Bma016477.1 Bma03g00209 78882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma03g00209 615 PRINTS Plant peroxidase signature 549 566 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma03g00209 615 PRINTS Plant peroxidase signature 413 423 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma03g00209 615 PRINTS Plant peroxidase signature 432 447 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma03g00209 615 PRINTS Plant peroxidase signature 533 548 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma03g00209 615 PRINTS Plant peroxidase signature 479 491 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma03g00209 615 PRINTS Plant peroxidase signature 354 374 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma03g00209 615 PRINTS Plant peroxidase signature 394 407 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma03g00209 615 PRINTS Plant peroxidase signature 589 602 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma03g00209 615 ProSiteProfiles Plant heme peroxidase family profile. 367 615 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma03g00209 615 Gene3D MFS general substrate transporter like domains 20 261 IPR036259 -
Bma03g00209 615 CDD secretory_peroxidase 367 613 IPR033905 GO:0004601|GO:0042744
Bma03g00209 615 Pfam Peroxidase 354 577 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma03g00209 615 Pfam POT family 95 367 IPR000109 GO:0016020|GO:0022857|GO:0055085
Bma03g00209 615 PRINTS Haem peroxidase superfamily signature 480 495 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma03g00209 615 PRINTS Haem peroxidase superfamily signature 414 431 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma03g00209 615 PRINTS Haem peroxidase superfamily signature 432 444 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma03g00209 615 PRINTS Haem peroxidase superfamily signature 535 550 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma03g00209 615 ProSitePatterns Peroxidases proximal heme-ligand signature. 480 490 IPR019793 -
Bma03g00209 615 Gene3D - 362 612 - -
Bma03g00209 615 SUPERFAMILY Heme-dependent peroxidases 353 615 IPR010255 GO:0004601|GO:0006979|GO:0020037
Bma03g00209 615 SUPERFAMILY MFS general substrate transporter 22 261 IPR036259 -
Bma03g00209 615 PANTHER PROTEIN NRT1/ PTR FAMILY 5.1 12 368 - -
Bma03g00209 615 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 12 368 IPR000109 GO:0016020|GO:0022857|GO:0055085
Bma03g00209 615 Gene3D Peroxidase, domain 2 458 594 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g00209 Bma-Chr3:1581454 Bma08g01044 Bma-Chr8:49563218 6.87E-142 dispersed
Bma03g00209 Bma-Chr3:1581454 Bma07g00047 Bma-Chr7:1376522 1.48E-25 wgd
Bma03g00209 Bma-Chr3:1581454 Bma08g01042 Bma-Chr8:49536459 1.40E-138 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma03g00209 - - tcc:18587404 614.764