Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bma03g00256 ATGGCGGGTTTTCTTCTTCTTCTTCTTTCCACTCTTTTCATTTCCACTGTTGTTTCATATTTCTTCCTCTTTTTCCGGGCCTGGAGATTGCGGCGATCCGCTCTTCCGCCGGGAAATCTCGGCCTGCCCTTTGTCGGTGAAACTCTGCAACTTATTTCTGCTTACAAGACCGAGAATCCAGAACCGTTCATCGACCAGAGGGTGAAGCGGTTCGGTTCCATATTCACGACCCATATCTTCGGCGAGCCGACTGTGTTCTCCACCGATCCGGAAACGAACCGTTTCATCCTCCAAAATGAAGGGAGATTGTTCGAGTGTAGCTACCCGGCCTCGATTTCTAATTTGTTGGGGAGGCATTCGTTGCTGCTGATGAAAGGAGTTCTTCATAGGAGAATGCATTCGCTCACGATGAGCTTTGCCAACTCGACCATCATTCGAGATCATCTTCTTGCAGACATAGACCGGTTGATTCGCCTCAATTTGGAGTCTTGGAAAGACCGGGTCTTTCTCATGGAGGAGGCAAAGAAGATAACGTTTGAGGTAGCAGTGAAGCAGTTAATGAGCTTTGATCCTGGCGAATGGACGGAGAATCTGATGAAAGAATACGTCCTTGTTATTGAAGGATTCTTCACTGTTCCTTTGCCGCTATTGTCCACCACTTACCGCAGAGCCATCAAAGCGAGGGGAAAGGTCGCAGAGGCATTGGGTCTGATAGTGAGGGAAAGGAGGAAAGAGAGAGAAGAAGGAAAGGTGAAGAATGACATGCTTGATGCTTTGTTGGCCGGAAACGACGGCTTCACCGACGAGCAAATCGTCGATTTCTTGCTTGCCCTTCTCGTCGCTGGCTACGAAACCACTTCTACGATTATGACTCTCGCCGTTAAGTTCCTCACAGAGACCCCTCTCGCATTGTCTCAACTCAAGGAGGAGCACGAACTGATCGAGGCCAGGAAGGGCGGCTCAGAAGGACAACTCCAATGGAGTGATTATAAGTCAATGCCATTCACCGAATGTGTTGTTAAAGAGACGTTAAGGGTTGCTAATATAATCAGTGGGGTGTTCAGGCGAGCCATGACAGACGTTCATATCAAAGCAGGACATACAATTCCGAAGGGATGGAAGGTTTTCGCTTCGTTCCGAGCGGTGCATCTGGATCACGATCATTTTAAGGATGCTCGAACTTTCAATCCATGGAGATGGAAGGAGAGCAACTCGGGAGGATCAGCCAATGTGTTTATGCCATTTGGAGGGGGTCCAAGGCTATGCCCTGGTTATGAGCTTGGTAGAGTCCAACTCTCTGTTTTTCTCCATCACTTGGTCACCAGATTCAGTTGGGTTCCGGCCGAAGAAGATAAGTTAGTATTTTTCCCGACGACCCGGACACAGAAACGCTATCCGATCAACGTTTTCCGCAGGAATCAAAATGGGAGTGCTTGTGTTAATTGTAAAGAGCAAATGTGA 1461 48.25 MAGFLLLLLSTLFISTVVSYFFLFFRAWRLRRSALPPGNLGLPFVGETLQLISAYKTENPEPFIDQRVKRFGSIFTTHIFGEPTVFSTDPETNRFILQNEGRLFECSYPASISNLLGRHSLLLMKGVLHRRMHSLTMSFANSTIIRDHLLADIDRLIRLNLESWKDRVFLMEEAKKITFEVAVKQLMSFDPGEWTENLMKEYVLVIEGFFTVPLPLLSTTYRRAIKARGKVAEALGLIVRERRKEREEGKVKNDMLDALLAGNDGFTDEQIVDFLLALLVAGYETTSTIMTLAVKFLTETPLALSQLKEEHELIEARKGGSEGQLQWSDYKSMPFTECVVKETLRVANIISGVFRRAMTDVHIKAGHTIPKGWKVFASFRAVHLDHDHFKDARTFNPWRWKESNSGGSANVFMPFGGGPRLCPGYELGRVQLSVFLHHLVTRFSWVPAEEDKLVFFPTTRTQKRYPINVFRRNQNGSACVNCKEQM 486
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
3 1966144 1968745 - Bma016530.1 Bma03g00256 78929
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bma03g00256 486 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 415 424 IPR017972 GO:0005506|GO:0016705
Bma03g00256 486 PANTHER CYTOCHROME P450 90A1 13 471 - -
Bma03g00256 486 SUPERFAMILY Cytochrome P450 28 472 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma03g00256 486 PRINTS P450 superfamily signature 338 349 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma03g00256 486 PRINTS P450 superfamily signature 413 422 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma03g00256 486 PRINTS P450 superfamily signature 281 298 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma03g00256 486 PRINTS P450 superfamily signature 422 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma03g00256 486 PRINTS E-class P450 group I signature 422 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma03g00256 486 PRINTS E-class P450 group I signature 412 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma03g00256 486 PRINTS E-class P450 group I signature 337 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma03g00256 486 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma03g00256 486 PRINTS E-class P450 group I signature 270 287 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma03g00256 486 PRINTS E-class P450 group I signature 378 402 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma03g00256 486 Gene3D Cytochrome P450 27 471 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma03g00256 486 Pfam Cytochrome P450 36 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma03g00256 486 PANTHER CYTOCHROME P450 26 13 471 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g00256 Bma-Chr3:1966144 Bma09g00093 Bma-Chr9:2502689 1.58E-125 dispersed
Bma09g00960 Bma-Chr9:49138906 Bma03g00256 Bma-Chr3:1966144 3.03E-66 dispersed
Bma12g00454 Bma-Chr12:11694491 Bma03g00256 Bma-Chr3:1966144 1.36E-75 dispersed
Bma03g00256 Bma-Chr3:1966144 Bma03g00991 Bma-Chr3:10712519 1.53E-124 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma03g00256 K09588 - tcc:18585886 760.37