Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma03g00284 | ATGGCGAATCGATGGTGGACGGGTAACGTAGCCATGAGAGGCGTGAACCCCATGTCTTCATCTCCTTCGTTTCAGATGAGAAACGCCGAAGAAGAGAGTGGAGGACTGAACAGGTTTGCACCGAGGAGAGAGCAAGAGCTATTCATGGATTCTCACACCAACTCAACCACTACGAACAGTAGCACGAGCAACCCCAACTCCACGCCTCGTAAACAATGCCTCCAGGACGAAGTTAGCCGGGAAAATTATCGGGAAACTGAAGAACCAATCTCTGGCGGCGTTGAGATCGTCGAACTAGGTAGTACCAGTGGCAATCGCCGGCCTCGCGGGCGACCTCCAGGGTCCAAAAACAAGCCAAAACCACCAATCGTTGTCACTAAAGAAAGCCCAAATGCTCTCCGAAGCCACGTCTTGGAAATCAGCACGGGCAGTGACATTGTCGAGAGCATCTCCACCTTCGCCCAACGCCGCCACCGAGGAGTCTCCGTTCTAAGCGGCAGTGGCATTGTCACAAACGTCTCTTTCGGACAACCTGCTGCACCAAACGGAGTCATCACTCTCCCTGGCAGATTTGAGATTTTGTCTCTATCTGGTGCGTTTTTACCTGCCCCGGCTCCTCCTGGAGCCACTGGACTGACGGTGTATTTAGCCGGAGGGCAAGGTCAGGTGGTGGGTGGAACAGTGGTGGGTTCGCTCATTGCTTCTGGTCCAGTTATGGTGATCGCAGCCACGTTTACTAATGCCACTTATGAGCGATTGCCAATCGAAGATGAGCAGCCAAATGATGATCAGGCAGCCCAATTACAGACGCGATCAGTGTCTCAAAGCATGGGCGATCAACCTCTAATGGCCACCTACAATATGCCGCCTCATTTGATACCAAATGGGCAGATGCCTTCTGATGTTTTCTGGGTTTCTCCTCCTCGCCCCCCTCCCTCTTACTGA | 945 | 52.91 | MANRWWTGNVAMRGVNPMSSSPSFQMRNAEEESGGLNRFAPRREQELFMDSHTNSTTTNSSTSNPNSTPRKQCLQDEVSRENYRETEEPISGGVEIVELGSTSGNRRPRGRPPGSKNKPKPPIVVTKESPNALRSHVLEISTGSDIVESISTFAQRRHRGVSVLSGSGIVTNVSFGQPAAPNGVITLPGRFEILSLSGAFLPAPAPPGATGLTVYLAGGQGQVVGGTVVGSLIASGPVMVIAATFTNATYERLPIEDEQPNDDQAAQLQTRSVSQSMGDQPLMATYNMPPHLIPNGQMPSDVFWVSPPRPPPSY | 314 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 2105603 | 2106547 | + | Bma016558.1 | Bma03g00284 | 78957 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma03g00284 | 314 | MobiDBLite | consensus disorder prediction | 254 | 278 | - | - | |
Bma03g00284 | 314 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 134 | 247 | IPR005175 | - | |
Bma03g00284 | 314 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 130 | 258 | - | - | |
Bma03g00284 | 314 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 | 9 | 314 | IPR014476 | GO:0003680 | |
Bma03g00284 | 314 | MobiDBLite | consensus disorder prediction | 262 | 278 | - | - | |
Bma03g00284 | 314 | MobiDBLite | consensus disorder prediction | 50 | 73 | - | - | |
Bma03g00284 | 314 | MobiDBLite | consensus disorder prediction | 1 | 124 | - | - | |
Bma03g00284 | 314 | MobiDBLite | consensus disorder prediction | 13 | 30 | - | - | |
Bma03g00284 | 314 | ProSiteProfiles | PPC domain profile profile. | 130 | 268 | IPR005175 | - | |
Bma03g00284 | 314 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 | 9 | 314 | - | - | |
Bma03g00284 | 314 | CDD | DUF296 | 134 | 217 | IPR005175 | - | |
Bma03g00284 | 314 | MobiDBLite | consensus disorder prediction | 74 | 88 | - | - | |
Bma03g00284 | 314 | Gene3D | - | 133 | 264 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bma03g00284 | Bma08g01008 | CCT | |
Bma03g00284 | Bma08g01108 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma03g00284 | Bma-Chr3:2105603 | Bma04g00746 | Bma-Chr4:8030831 | 1.08E-76 | dispersed | |
Bma03g00140 | Bma-Chr3:1061309 | Bma03g00284 | Bma-Chr3:2105603 | 7.27E-117 | wgd | |
Bma03g00284 | Bma-Chr3:2105603 | Bma08g01108 | Bma-Chr8:50062189 | 4.56E-94 | wgd | |
Bma03g00284 | Bma-Chr3:2105603 | Bma08g01008 | Bma-Chr8:49104811 | 6.37E-171 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma03g00284 | - | - | qsu:112039774 | 372.474 |