Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma03g00293 | GATAAACTGGAGTTGATACAAAATACATGCAAGAAGATTGTGGAGTGCACAAACCAATATTCATTCGCAAACTTGGATGATCAACAAGTCTATTCCCTGATGAAGCTTCGAGAAATAGCTCATCGCGTCATTACCGATCAGGATACTAGGGTGACAGAGAATGAGCTTACAAGTGCAATGTGCTATTATATTAACAGAATGGCGGACAGGTGTAAGGAGATTGTCAAGGTTGTAGATAGAATTCTATCAGCAAGCTTGGATGACCAACAGCTGCACTTACTGCTTAGAGTGAAAGAACTTTTATGTGGGATTATCAGAGGAGCGAAAGATGTAGAAATTGAACCTTCTAATTACAGCTATCTTGTGAGGAAAACAATTATTAAAAATGATTTAAGCATTGTAGAGAGCATAGAGGCATTAACCCCCACTAAGGAGGACATGCAGATACGAGTGGCTCAGAGTATGATGGACATGATAGTGGAAGATGAGTCATTCCAAATTGAATCTGGGTTAGGAAGTAAAGATGTGGACGAGTTACACAAGATCAATTGGCCTGCAAATGGCTCCATAACCTTAGAGTGGGTTGTGGACATGATGAGCACCCTCGAGAAGTCTTCATGGAAAAACTTGCCTTCAGAATTTCGACATGTTGTATCAGTTGACTTGGTGGATGAGTTACTCGATAAAGTTGGAAGAATTCTTCACGAGGAACCAAACTGCGTGGAAATTGAATTACCAGAAGAGGGTTCGAGAGTTGTTGTTATAGGTGACATTCAAGGGCAGTATCATGATTTACTTCATTTACTAGTACTTGCAAACTTTGCTTCAAGGAACCAGTTTTATGTCTGCTGTGGGGATTATGTTGGTAGAGGTGCATGGGGATTAGAGGTGTTTTTGATCTTGTCGGCATGGAAGATTTTGATGCCTGATAGAGTTTTTTTGCTGCGCGGAAATCACGAGTCCAGACATTGTGCCTCAGCCTGTGGTTTTGAGGAGGAAGTAAGGATCAAATACGGGGAGCAAGGTGAGAAGGTTTATGACAGATGCTTGGAAACCTTTAAAGAGCTTCCTTTGGCCACAATTATAGCTGGTAGAGTATATGTAACTCATGGAGGGATATTTCGCAAGGGATCCACAAAGTCTCCTCTAATGCTTGAGGAGACATTTGAGAAAATACTTGAAGTTGGTTCATTAGAAGAATTGTTTAGAATTGATAGGTATCTGATAGATGCCCCTAGTGCAGATGAAGATCCAAATATAATATTGACCGATGTGTTATGGTCTGATCCATCAAAGGAAGAGGGGCTTAAGACAAATAGAGGTCGAGGCTTAGGTCTGCAATGGGGTCCTGATTGCACTGAAGCATTTCTGAAACAAAACAACTTAAAGGCTATTATAAGATCGCATGAAGGCCCTTACGAAAGGGATGGTCAACTTGGTAAGAAAAGCTTTCACAATGAAGGAGCTTATGCTGTGTTGGAGCCACCTAATATAGAACCAAGAATTGCCATTGCCATTGCCGTTTCTGTTCTACGATTCTCCAGTTCTTATTCACCATTCTTCAAACACATTCTAAAATTGTATCAAATGCATGAGAAACAGGCCTTGACTGATGGTACCCCTTTGGATATATCATATCCAGCCAGTACAAGTTCTGGCGTTAATTTTGCGGCATTGGGTATCTTGAATCCACCTCAGTGGAGTGTTACGTTAAGTGACGACGAAGCCGGCTCTCAGAACGTTGAAGTTCCAAAAGCTCCGGTAGTAGAAGGACTTCCTCTACCATCAAATCTTGAGAACCCCCACAGGGCTGCTTACGAGTACTTCTTGGAGCTCATCGCTGGACTGAAGCTTATGGTTCAGAAAACGGTGAGTTGA | 1878 | 41.75 | DKLELIQNTCKKIVECTNQYSFANLDDQQVYSLMKLREIAHRVITDQDTRVTENELTSAMCYYINRMADRCKEIVKVVDRILSASLDDQQLHLLLRVKELLCGIIRGAKDVEIEPSNYSYLVRKTIIKNDLSIVESIEALTPTKEDMQIRVAQSMMDMIVEDESFQIESGLGSKDVDELHKINWPANGSITLEWVVDMMSTLEKSSWKNLPSEFRHVVSVDLVDELLDKVGRILHEEPNCVEIELPEEGSRVVVIGDIQGQYHDLLHLLVLANFASRNQFYVCCGDYVGRGAWGLEVFLILSAWKILMPDRVFLLRGNHESRHCASACGFEEEVRIKYGEQGEKVYDRCLETFKELPLATIIAGRVYVTHGGIFRKGSTKSPLMLEETFEKILEVGSLEELFRIDRYLIDAPSADEDPNIILTDVLWSDPSKEEGLKTNRGRGLGLQWGPDCTEAFLKQNNLKAIIRSHEGPYERDGQLGKKSFHNEGAYAVLEPPNIEPRIAIAIAVSVLRFSSSYSPFFKHILKLYQMHEKQALTDGTPLDISYPASTSSGVNFAALGILNPPQWSVTLSDDEAGSQNVEVPKAPVVEGLPLPSNLENPHRAAYEYFLELIAGLKLMVQKTVS | 625 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 2199821 | 2204292 | + | Bma016568.1 | Bma03g00293 | 78966 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma03g00293 | 625 | SUPERFAMILY | Metallo-dependent phosphatases | 187 | 499 | IPR029052 | - | |
Bma03g00293 | 625 | ProSitePatterns | Serine/threonine specific protein phosphatases signature. | 315 | 320 | IPR006186 | GO:0016787 | |
Bma03g00293 | 625 | PANTHER | SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED | 3 | 479 | - | - | |
Bma03g00293 | 625 | Pfam | Calcineurin-like phosphoesterase | 251 | 473 | IPR004843 | GO:0016787 | |
Bma03g00293 | 625 | PANTHER | SERINE/THREONINE-PROTEIN PHOSPHATASE | 3 | 479 | - | - | |
Bma03g00293 | 625 | PANTHER | SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED | 478 | 621 | - | - | |
Bma03g00293 | 625 | PRINTS | Serine/threonine phosphatase family signature | 404 | 431 | IPR006186 | GO:0016787 | |
Bma03g00293 | 625 | PRINTS | Serine/threonine phosphatase family signature | 251 | 278 | IPR006186 | GO:0016787 | |
Bma03g00293 | 625 | PRINTS | Serine/threonine phosphatase family signature | 281 | 308 | IPR006186 | GO:0016787 | |
Bma03g00293 | 625 | PRINTS | Serine/threonine phosphatase family signature | 314 | 338 | IPR006186 | GO:0016787 | |
Bma03g00293 | 625 | PRINTS | Serine/threonine phosphatase family signature | 351 | 377 | IPR006186 | GO:0016787 | |
Bma03g00293 | 625 | PANTHER | SERINE/THREONINE-PROTEIN PHOSPHATASE | 478 | 621 | - | - | |
Bma03g00293 | 625 | SMART | pp2a_7 | 218 | 509 | IPR006186 | GO:0016787 | |
Bma03g00293 | 625 | Gene3D | - | 177 | 548 | IPR029052 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma03g00293 | Bma-Chr3:2199821 | Bma12g00687 | Bma-Chr12:29471453 | 8.06E-38 | dispersed | |
Bma03g00293 | Bma-Chr3:2199821 | Bma06g00076 | Bma-Chr6:1187675 | 2.84E-95 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma03g00293 | K04460 | - | csv:101211172 | 665.611 |