Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma03g00293 GATAAACTGGAGTTGATACAAAATACATGCAAGAAGATTGTGGAGTGCACAAACCAATATTCATTCGCAAACTTGGATGATCAACAAGTCTATTCCCTGATGAAGCTTCGAGAAATAGCTCATCGCGTCATTACCGATCAGGATACTAGGGTGACAGAGAATGAGCTTACAAGTGCAATGTGCTATTATATTAACAGAATGGCGGACAGGTGTAAGGAGATTGTCAAGGTTGTAGATAGAATTCTATCAGCAAGCTTGGATGACCAACAGCTGCACTTACTGCTTAGAGTGAAAGAACTTTTATGTGGGATTATCAGAGGAGCGAAAGATGTAGAAATTGAACCTTCTAATTACAGCTATCTTGTGAGGAAAACAATTATTAAAAATGATTTAAGCATTGTAGAGAGCATAGAGGCATTAACCCCCACTAAGGAGGACATGCAGATACGAGTGGCTCAGAGTATGATGGACATGATAGTGGAAGATGAGTCATTCCAAATTGAATCTGGGTTAGGAAGTAAAGATGTGGACGAGTTACACAAGATCAATTGGCCTGCAAATGGCTCCATAACCTTAGAGTGGGTTGTGGACATGATGAGCACCCTCGAGAAGTCTTCATGGAAAAACTTGCCTTCAGAATTTCGACATGTTGTATCAGTTGACTTGGTGGATGAGTTACTCGATAAAGTTGGAAGAATTCTTCACGAGGAACCAAACTGCGTGGAAATTGAATTACCAGAAGAGGGTTCGAGAGTTGTTGTTATAGGTGACATTCAAGGGCAGTATCATGATTTACTTCATTTACTAGTACTTGCAAACTTTGCTTCAAGGAACCAGTTTTATGTCTGCTGTGGGGATTATGTTGGTAGAGGTGCATGGGGATTAGAGGTGTTTTTGATCTTGTCGGCATGGAAGATTTTGATGCCTGATAGAGTTTTTTTGCTGCGCGGAAATCACGAGTCCAGACATTGTGCCTCAGCCTGTGGTTTTGAGGAGGAAGTAAGGATCAAATACGGGGAGCAAGGTGAGAAGGTTTATGACAGATGCTTGGAAACCTTTAAAGAGCTTCCTTTGGCCACAATTATAGCTGGTAGAGTATATGTAACTCATGGAGGGATATTTCGCAAGGGATCCACAAAGTCTCCTCTAATGCTTGAGGAGACATTTGAGAAAATACTTGAAGTTGGTTCATTAGAAGAATTGTTTAGAATTGATAGGTATCTGATAGATGCCCCTAGTGCAGATGAAGATCCAAATATAATATTGACCGATGTGTTATGGTCTGATCCATCAAAGGAAGAGGGGCTTAAGACAAATAGAGGTCGAGGCTTAGGTCTGCAATGGGGTCCTGATTGCACTGAAGCATTTCTGAAACAAAACAACTTAAAGGCTATTATAAGATCGCATGAAGGCCCTTACGAAAGGGATGGTCAACTTGGTAAGAAAAGCTTTCACAATGAAGGAGCTTATGCTGTGTTGGAGCCACCTAATATAGAACCAAGAATTGCCATTGCCATTGCCGTTTCTGTTCTACGATTCTCCAGTTCTTATTCACCATTCTTCAAACACATTCTAAAATTGTATCAAATGCATGAGAAACAGGCCTTGACTGATGGTACCCCTTTGGATATATCATATCCAGCCAGTACAAGTTCTGGCGTTAATTTTGCGGCATTGGGTATCTTGAATCCACCTCAGTGGAGTGTTACGTTAAGTGACGACGAAGCCGGCTCTCAGAACGTTGAAGTTCCAAAAGCTCCGGTAGTAGAAGGACTTCCTCTACCATCAAATCTTGAGAACCCCCACAGGGCTGCTTACGAGTACTTCTTGGAGCTCATCGCTGGACTGAAGCTTATGGTTCAGAAAACGGTGAGTTGA 1878 41.75 DKLELIQNTCKKIVECTNQYSFANLDDQQVYSLMKLREIAHRVITDQDTRVTENELTSAMCYYINRMADRCKEIVKVVDRILSASLDDQQLHLLLRVKELLCGIIRGAKDVEIEPSNYSYLVRKTIIKNDLSIVESIEALTPTKEDMQIRVAQSMMDMIVEDESFQIESGLGSKDVDELHKINWPANGSITLEWVVDMMSTLEKSSWKNLPSEFRHVVSVDLVDELLDKVGRILHEEPNCVEIELPEEGSRVVVIGDIQGQYHDLLHLLVLANFASRNQFYVCCGDYVGRGAWGLEVFLILSAWKILMPDRVFLLRGNHESRHCASACGFEEEVRIKYGEQGEKVYDRCLETFKELPLATIIAGRVYVTHGGIFRKGSTKSPLMLEETFEKILEVGSLEELFRIDRYLIDAPSADEDPNIILTDVLWSDPSKEEGLKTNRGRGLGLQWGPDCTEAFLKQNNLKAIIRSHEGPYERDGQLGKKSFHNEGAYAVLEPPNIEPRIAIAIAVSVLRFSSSYSPFFKHILKLYQMHEKQALTDGTPLDISYPASTSSGVNFAALGILNPPQWSVTLSDDEAGSQNVEVPKAPVVEGLPLPSNLENPHRAAYEYFLELIAGLKLMVQKTVS 625
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 2199821 2204292 + Bma016568.1 Bma03g00293 78966
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma03g00293 625 SUPERFAMILY Metallo-dependent phosphatases 187 499 IPR029052 -
Bma03g00293 625 ProSitePatterns Serine/threonine specific protein phosphatases signature. 315 320 IPR006186 GO:0016787
Bma03g00293 625 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 3 479 - -
Bma03g00293 625 Pfam Calcineurin-like phosphoesterase 251 473 IPR004843 GO:0016787
Bma03g00293 625 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 3 479 - -
Bma03g00293 625 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 478 621 - -
Bma03g00293 625 PRINTS Serine/threonine phosphatase family signature 404 431 IPR006186 GO:0016787
Bma03g00293 625 PRINTS Serine/threonine phosphatase family signature 251 278 IPR006186 GO:0016787
Bma03g00293 625 PRINTS Serine/threonine phosphatase family signature 281 308 IPR006186 GO:0016787
Bma03g00293 625 PRINTS Serine/threonine phosphatase family signature 314 338 IPR006186 GO:0016787
Bma03g00293 625 PRINTS Serine/threonine phosphatase family signature 351 377 IPR006186 GO:0016787
Bma03g00293 625 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 478 621 - -
Bma03g00293 625 SMART pp2a_7 218 509 IPR006186 GO:0016787
Bma03g00293 625 Gene3D - 177 548 IPR029052 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g00293 Bma-Chr3:2199821 Bma12g00687 Bma-Chr12:29471453 8.06E-38 dispersed
Bma03g00293 Bma-Chr3:2199821 Bma06g00076 Bma-Chr6:1187675 2.84E-95 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma03g00293 K04460 - csv:101211172 665.611