Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma03g00313 ATGCCACTTGCAGAAACTCGGAAGAGTAATGCATTCATGTTGAGAAGAGAGATCTCAGACGTCTCAATCTCATCTTCCAAAACACTTCACTGTTCTTCTCCGTTTCCTGCTTCTCTCACTTCTCTTTCAGTACCATTTTTGGAGTCGACGATGGAGGAAATCCTCGAAAATGCTGAATCTATTATCTCCAAATGGGATTTAAACTCTTCTAGTTCCACCAAATTAACTGACCTCTTTCAACATGACAGGAAAGAAGCTATGGCTTTTCTCAAATCGGTCAGTGATTTGAGAAAAGTCATGCAATATCTGATCGTTGAGAACGCTACCTCTGGGAAACTCTCTAGAGCTCAAAAGCTGATGCAAATCGCCATGAAAAGGCTCGAGAAAGAGTTCTACCAAATTCTGGTCGCCAATCGCAACCGTCTCCATCCAGAATCAGTTTCCGTCCGATCTTCGCGAGGATCATCTAATTCCGATGAAGATGATGAGATAGGGACGGATTCTGAACTGGAAATTACAGGTAACTACATCTCCGAAATGGAAAGAGCTTCGGAATTGGCCATGTCTGATTTGAAATCCATAGCGGACTGTATGATCAGTTCTGGATATAGGAAAGAGTGCGCGAAGATATATAAGATTATCAGAAAATCGATAATTGACGAAGCACTATATCGTCTTGGAACTGAGAAATTCAATCTGTCTCAATTTCAAAAAACGAACTGGGAATCACTCGAACTCTTAATCAAAAACTGGATGGTCGTCCTTAAGATTGCCGTGAGAAAGCTGTTCAGAGGAGAGAGAATTATCTGTGATCACGTTTTTTCATCTTCAGAAGCAATAAGAGAATCATGTTTCAGTAAAATAACCAAGGAAGGAGCGATCAAACTCTTCAAATTTCCAGAACCGATCGCCAAAAACAAGAAGGACACTGAAAGAATTTTCCTACTGCTCGATCTTCACGAAGCAATCTCGGATCTCTGGCCTGAAATGGAATCAATTTTCGACTCGTCATCAACCTCCGCAGTCAAATCACAAGCTCATTCATCTCTCTTCAAACTTAGAGACTCAATTCGAGCTATCATCTCTGAATTTGAATCAACAGTCCAGAAAGATTCCTCCAAGTCACCAGTTTTCGGCGGCGGAATTCACCCGCTGACTCGTTGGGCTATGACTTTTATACCTGCTCTTGCAGATTACAGTGGAACTCTCTCTTTCATCATTACAGACATTACACACTCTGCAAATCCCCAATTCGCTGACTCTTACTTTGAAATTCTCTTCCCTGACGATTCTTCAACTCCACTGGTGGCCACCCACTTAGCTTGGCTAATCTTAGTTCTTCTGTGCAAGCTTGATACCAAAGCTAAGCTCTACAAAGATGTCTCCTTATCATATCTTTTTCTCACCAATAATCTGCACTTTATCTTAGAAAAAGTCTCCACAACCAACCTCAGATACCTTTTTGGGGATTCTTGGATTTCAAGTCACAAGAAGAAAGCCAAATTAGCTGCTTCAAGCTATGAATCTACTGCTTGGTTTAAGGTGCTATCATCTTTACAAGAGAGAAACGGGTCTGTAATTTCTGTGAGGGAATGCTTCAAGAAGTTCAACGCAGCTTTTGAAGAAGCATACAGGAAGCAAACTTCATGGATTGTTACTGATTCCAAGCTCAGGGATGAACTCATAGTGTCAATAGCAAACAAACTCTTACCTGCATACACTGAATTTTACGACAGAAATGTCGTTTTGCTGAGCGGCGAGAGGGACTTGGAGTTGCTGATCAGATTCTCACCGGAAGATATGGGAAATTATCTTTCTGATTTATTCCACGGAACTTCTTCCTCCGGCAGCTCTTCCTCGTCGTCTACATTGTTTGGTTCTCGAGGATGCTTTCCGGCCCTGCCTCGATGA 1911 41.86 MPLAETRKSNAFMLRREISDVSISSSKTLHCSSPFPASLTSLSVPFLESTMEEILENAESIISKWDLNSSSSTKLTDLFQHDRKEAMAFLKSVSDLRKVMQYLIVENATSGKLSRAQKLMQIAMKRLEKEFYQILVANRNRLHPESVSVRSSRGSSNSDEDDEIGTDSELEITGNYISEMERASELAMSDLKSIADCMISSGYRKECAKIYKIIRKSIIDEALYRLGTEKFNLSQFQKTNWESLELLIKNWMVVLKIAVRKLFRGERIICDHVFSSSEAIRESCFSKITKEGAIKLFKFPEPIAKNKKDTERIFLLLDLHEAISDLWPEMESIFDSSSTSAVKSQAHSSLFKLRDSIRAIISEFESTVQKDSSKSPVFGGGIHPLTRWAMTFIPALADYSGTLSFIITDITHSANPQFADSYFEILFPDDSSTPLVATHLAWLILVLLCKLDTKAKLYKDVSLSYLFLTNNLHFILEKVSTTNLRYLFGDSWISSHKKKAKLAASSYESTAWFKVLSSLQERNGSVISVRECFKKFNAAFEEAYRKQTSWIVTDSKLRDELIVSIANKLLPAYTEFYDRNVVLLSGERDLELLIRFSPEDMGNYLSDLFHGTSSSGSSSSSSTLFGSRGCFPALPR 636
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 2334721 2336631 + Bma016590.1 Bma03g00313 78986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma03g00313 636 Pfam Exo70 exocyst complex subunit 249 607 IPR046364 GO:0000145|GO:0005546|GO:0006887
Bma03g00313 636 PANTHER EXOCYST COMPLEX PROTEIN EXO70 22 621 IPR004140 GO:0000145|GO:0006887
Bma03g00313 636 MobiDBLite consensus disorder prediction 146 165 - -
Bma03g00313 636 Gene3D Exocyst complex component Exo70 59 618 - -
Bma03g00313 636 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 22 621 - -
Bma03g00313 636 SUPERFAMILY Cullin repeat-like 83 610 IPR016159 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g00313 Bma-Chr3:2334721 Bma04g00649 Bma-Chr4:6249251 3.20E-157 dispersed
Bma01g01893 Bma-Chr1:69735239 Bma03g00313 Bma-Chr3:2334721 1.16E-143 wgd
Bma11g00137 Bma-Chr11:1219355 Bma03g00313 Bma-Chr3:2334721 0 wgd
Bma14g00483 Bma-Chr14:5467529 Bma03g00313 Bma-Chr3:2334721 0 wgd
Bma03g00313 Bma-Chr3:2334721 Bma07g00116 Bma-Chr7:1844124 0 wgd
Bma03g00313 Bma-Chr3:2334721 Bma08g00969 Bma-Chr8:48666134 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma03g00313 K07195 - jre:108996488 725.702