Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma03g00334 ATGGCTTCCAACACGTTAATGAGCTGCGGAATCGCAGCAGTGGCATACCCGTCGGTCCTCTCGTCGTCCAAATCGAAGTTCGCCGCCTCATTCGCACTTCCTTCGGGATATGCCAATGCGTCGTCACGCTTCTCCATGTCCGCCGAATGGATGCCCGGCCAGCCAAGACCTACATACCTGGATGGTTCTGCTCCGGGAGATTTTGGGTTTGACCCACTTGGGTTGGGTTCAGTGCCCGAGAATCTGGAGAGGTTCAAAGAGTCTGAACTCATCCATTGCAGATGGGCCATGGTCGCCGTTCCTGGGATCTTGATTCCAGAGGCGTTGGGGTTAGGCAACTGGGTGAAGGCTCAAGAGTGGGCTGCTATTCCGGGAGGACAAGCCACCTATTTGGGGCAGCCAGTTCCTTGGGGCACATTACCTACAATTTTGGTGATTGAGTTTCTTGCTATTGCTTTCGTAGAGCACCAACGCAGCATGGAAAAAGACCCGGAGAAGAAGAAGTACCCTGGAGGTGCATTTGATCCCCTGGGCTTCTCTAAAGACCCTGCAAAGTTCAAGGAATACAAAATCAAAGAGGTTAAAAATGGTCGGCTAGCGCTGTTGGCATTTGTTGGGTTCTGTGTGCAGCAATCAGCATACCCAGGGACAGGGCCATTGGAGAACTTGGCCACTCACTTGGCTGACCCATGGCACAACAACATTGGCGATATCATCATCCCAAGAGGGTTGTAA 735 52.38 MASNTLMSCGIAAVAYPSVLSSSKSKFAASFALPSGYANASSRFSMSAEWMPGQPRPTYLDGSAPGDFGFDPLGLGSVPENLERFKESELIHCRWAMVAVPGILIPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGFSKDPAKFKEYKIKEVKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRGL 244
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 2489126 2490531 + Bma016612.1 Bma03g00334 79007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma03g00334 244 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 6, CHLOROPLASTIC 22 237 - -
Bma03g00334 244 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 22 237 IPR001344 GO:0009765|GO:0016020
Bma03g00334 244 SUPERFAMILY Chlorophyll a-b binding protein 39 239 - -
Bma03g00334 244 Gene3D Chlorophyll a/b binding protein domain 51 237 - -
Bma03g00334 244 Pfam Chlorophyll A-B binding protein 57 211 IPR022796 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma03g00334 Bma08g00942 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g00334 Bma-Chr3:2489126 Bma14g01033 Bma-Chr14:12102495 4.97E-47 dispersed
Bma10g00329 Bma-Chr10:3027897 Bma03g00334 Bma-Chr3:2489126 3.45E-44 transposed
Bma11g00895 Bma-Chr11:34032587 Bma03g00334 Bma-Chr3:2489126 4.72E-46 transposed
Bma03g00334 Bma-Chr3:2489126 Bma08g00942 Bma-Chr8:48421725 1.79E-175 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma03g00334 K08907 - pvy:116130060 452.981