Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma03g00343 CTCCATTCGATAGCTATGGAGCAGTCGAGCCGAGAAAATGGCGGAGAAGGGACGACAAGCCTCTGCAAAAGTGCAGACCCGTTGAACTGGGGATCGCTGGCGGAGGGCCTGAGAGGGAGCCATTTGGAGGAGGTGAAGCGGATGGTGGACGAATATCGCAAGGTGGTGGTTCTGCTAGGCGGTGAAACTCTGACGATAGGTCAGGTTACCTCCATTGCCTACGGGGCGGTGACGGTGGAGCTGTCGGAGGCAACAAGGGAGAGAGTGAAGGCCAGCAGTGATTGGGTCGTTGAGAGTACGAAACAAGGGACTGATTGCTATGGAGTTACGACTGGTTTTGGCGCAACCTCCCATAGACGGACCAATGAAGGTGGTGCTCTCCAAAAGGAGCTAATCAGGTTTTTGAATGCTGGAATATTTGGAAACGGGAAAGACACAAGTCATACATTACCGGAGTCGGTGAGCAGAGCAGCCATGGTAGTGAGGATAAACACCCTTTTGCAGGGCTACTCCGGCATCAGATTTGAGATCCTGGAAGCCATCGCTAAGCTTCTCAATCACAACATTACTCCCTGCCTTCCTCTCAGAGGAACTATCACCGCTTCTGGAGATTTAGTCCCTCTCTCTTACATTGCAGGTTTATCCATTTTTAGCAACATAATTTTGTGTTTCTATGTCCTCTGTTGCTCACCTTTTGATCCGGGATCTGCAGGGTTGTTAGCCGGGAGGCCGAACTCGAAGGCTGTTGGTCTGAAAGGGGAGTCTCTTAATGCTTCCGAAGCCTTTCGACTGGCCGGCATAGGTGGAGGGTTCTTTGAGCTGCAGCCAAAAGAGGGTCTTGCTCTGGTTAATGGCACTGCCGTCGGGTCTGGTTTAGCCTCTACCGTTCTTTTCGAGACCAACATTCTTGCACTTCTTGCCGAGGTTTTGTCGGCAATTTTCGCTGAAGTTATGCAAGGAAAGCCGGAATTTACGGACCATTTGACGCATAGATTGAAGCATCATCCTGGGCAGATTGAAGCTGCAGCCATAATGGAGCACATTTTAGATGGAAGCTCTTACGTCAAATCAGCTCAAAAACTTCATGAGATGGACCCCCTGCAAAAGCCAAAGCAGGATAGATATGCTCTGAGAACATCTCCGCAATGGCTCGGACCTCAAATCGAAGTCATCCGAGTCGCCACCAAGATGATCGAACGGGAAATCAACTCCGTCAATGATAACCCGTTGATTGACGTTTCGAGGAACAAGGCTTTACATGGGGGCAATTTCCAAGGTACTCCAATTGGTGTCTCGATGGACAATACTCGCCTAGCCATTGCTTCTATTGGAAAGCTCATGTTTGCCCAATTTTCCGAGCTAGTCAATGACTTTTACAACAATGGCTTGCCGTCAAATCTCTCTGCCAGTCGTAATCCGAGCTTAGACTATGGATTCAAGGGTGCCGAAATAGCCATGGCGTCTTACTGCTCAGAGCTTCAATTCTTCGCCAATCCAGTCACGAATCACGTGCAAAGTGCAGAGCAACACAACCAGGATGTGAACTCACTTGGATTAATTTCTGCAAGAAAAACAGCCGAAGCAGTAGACATATGGAAGCTCATGTCCTCCACTTTCTTAGTGGCATTATGTCAAGCAGTTGATCTGCGTCATTTGGAGGAAAACCTAAAGAACGCAGTGAAAAACACAGTCGGCCAAGTATCAAAGAAGGTCTTAGTAATGGGATTAAATGGAGGACTCCACCCAATCAGATTCAGCGAAAAAGATTTACTCAAAGTGGTAGACAGAGAGCACATATTCTCGTACATCGACGACCCATGCAGCGCCACATACCCATTGATTCAAAAACTGAGGCAAGTTCTGGTAGACCATGCGCTCAGCAACGGCGACAGAGAGCGAAATCCAAGCACGTCCATTTTCCAAAAAATCGGAGCTTTCGAGGCAGAACTGAAAACCCTATTGCCTAGAGAAGTGGAAAACGCGAGGAAAGAGTACGAAAATGGAAACCCGGGAATTCAAAACCAGATTAAGGAGTGCAGATCATACCCATTATACAGGTGGGCGAGAGAAACAGTAGGGACAAAACTTCTGACCGGAGAGGAAGTTAGATCTCCGGGTGAAGAATTTGAGAAAGTATTCTGTGCAATCTGTGATGGGAAACTGATTGATCCATTGCTCGAGTGTTTGAAAGACTGGAATGGCGCTCCTCTTCCTATTTGCTAA 2223 48.04 LHSIAMEQSSRENGGEGTTSLCKSADPLNWGSLAEGLRGSHLEEVKRMVDEYRKVVVLLGGETLTIGQVTSIAYGAVTVELSEATRERVKASSDWVVESTKQGTDCYGVTTGFGATSHRRTNEGGALQKELIRFLNAGIFGNGKDTSHTLPESVSRAAMVVRINTLLQGYSGIRFEILEAIAKLLNHNITPCLPLRGTITASGDLVPLSYIAGLSIFSNIILCFYVLCCSPFDPGSAGLLAGRPNSKAVGLKGESLNASEAFRLAGIGGGFFELQPKEGLALVNGTAVGSGLASTVLFETNILALLAEVLSAIFAEVMQGKPEFTDHLTHRLKHHPGQIEAAAIMEHILDGSSYVKSAQKLHEMDPLQKPKQDRYALRTSPQWLGPQIEVIRVATKMIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIASIGKLMFAQFSELVNDFYNNGLPSNLSASRNPSLDYGFKGAEIAMASYCSELQFFANPVTNHVQSAEQHNQDVNSLGLISARKTAEAVDIWKLMSSTFLVALCQAVDLRHLEENLKNAVKNTVGQVSKKVLVMGLNGGLHPIRFSEKDLLKVVDREHIFSYIDDPCSATYPLIQKLRQVLVDHALSNGDRERNPSTSIFQKIGAFEAELKTLLPREVENARKEYENGNPGIQNQIKECRSYPLYRWARETVGTKLLTGEEVRSPGEEFEKVFCAICDGKLIDPLLECLKDWNGAPLPIC 740
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 2569170 2571903 + Bma016621.1 Bma03g00343 79016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma03g00343 740 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 197 213 IPR022313 GO:0016841
Bma03g00343 740 Gene3D - 235 286 IPR024083 -
Bma03g00343 740 Gene3D - 17 219 IPR024083 -
Bma03g00343 740 Gene3D Fumarase/aspartase (Central domain) 287 735 - -
Bma03g00343 740 Pfam Aromatic amino acid lyase 64 562 IPR001106 -
Bma03g00343 740 PANTHER PHENYLALANINE AMMONIA-LYASE 1-LIKE 16 216 - -
Bma03g00343 740 PANTHER PHENYLALANINE AMMONIA-LYASE 1-LIKE 237 740 - -
Bma03g00343 740 CDD PAL-HAL 62 550 IPR001106 -
Bma03g00343 740 Gene3D - 553 674 IPR023144 -
Bma03g00343 740 PANTHER HISTIDINE AMMONIA-LYASE 16 216 IPR001106 -
Bma03g00343 740 PANTHER HISTIDINE AMMONIA-LYASE 237 740 IPR001106 -
Bma03g00343 740 MobiDBLite consensus disorder prediction 1 21 - -
Bma03g00343 740 SUPERFAMILY L-aspartase-like 26 740 IPR008948 GO:0003824
Bma03g00343 740 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 237 730 IPR005922 GO:0005737|GO:0006559|GO:0016841
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma03g00343 Bma08g00933 CCT
Bma03g00343 Bma08g00933 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g00343 Bma-Chr3:2569170 Bma04g00602 Bma-Chr4:5744694 0 dispersed
Bma01g01926 Bma-Chr1:71104066 Bma03g00343 Bma-Chr3:2569170 0 wgd
Bma03g00343 Bma-Chr3:2569170 Bma08g00933 Bma-Chr8:48345611 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma03g00343 K10775 - cit:102607860 1162.52