Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma03g00359 ATGGAGTCCTCTTCGTCCCCTAACGGAGGATGGACCAGATCTACTGCGAAAACCTTCGCAGTTCAGACACTGAAAGGGTCCTGGTTCATGATCTTCGCCACCTTCCTCATCATGTCTATGGCCGGAATTCCCTACCTCTTCGGGCTTTACTCCGGCACCATCAAATCGGTGCTTGGTTACGATCAGACCACGCTGAACTTCGTTAGTTTCTTCAAAGACGTCGGAACTACCGTCGGCGTCCTCGCTGGACTTATTAACGAGGTTACGCCCCCGTGGGCGGTGCTCGCCATGGGAGCAGTGCTCAACTTTTTCGGCTACTTTATGATCTGGCTTTCTGTGACGAAAAAAATCCCGACCAAAGTATGGCTAATGTGTTTATACATCTGCGTCGGAGCTAATGCGACGACGTTTGCCAATACCGGAGCTCTGGTCACCTGCGTGAAGAACTACCCGGAGAGACGAGGGGTGGTGATCGGAATTCTGAAAGGCTATATGGGTTTGAGCGGGGCGATTGTTACTCAACTGTACCATGCGATTTACGGAAACGACGCGAAGACTTTTCTTCTGCTTCTCGGGTGGCTACCGGCGGCGGTTTCCTTCGTTTTCTTACCGACGGTGAGAATTATGAAGGTTTCTCACCAGCCAAACGAGCTCAAAGTTTTCTATAATTTCCTTTATATTTCTCTCGGCCTTGCTGGGTTTATTATGCTCATGATTATTCTGCAACAAAAATATTCGTTTACTCACGGTGGTTACAGCGGAAGTGCGTCAATGGTGGTTTTCCTTCTCTTGCTTCCATTGGCAGTCGTTCTTTACGAAGAATACAAGCTTTGGAAGAAGAAGATGTTGGTGGTAAACGACCCTTCGCCGTTAACCATCGTCGCCCAAGAAGCCAAAAACTCTCAAATTTTTCACGAATCAAAGGATGTTCTGATCAAATCAAGCTCAGAAAATCTGAAACCAGCACATAAATGGTGGGAAAACGTGTTTAAACCTCCACAAAGAGGAGATGACTTCACGATTCTCCAAGCTCTTTTTAGCTTCGATATGCTTCTTCTCTTCATCGCTACCGCATGTGGAGTAGGAGGAACGTTGACCGCCATTGATAACCTCGGACAAATCGGAGCTTCCTTGAATTACCCGAAAAAAAGCATAAGCACCTTCGTCTCTCTCGTGAGCATCTGGAATTATCTCGGTCGAGTTTTCGCCGGTTTCTCTTCTGAAATGCTACTGACAGAATATAAATTCCCTCGTCCATTAATGCTCACCTTCGTCCTCCTCCTTTCCTGCGTCAGCCACCTTCTCATCGCCTTCGACCCGCCCGGTGGCCTCTACATCGCCTCCATTCTCACCGGTTTCTGCTACGGAGCTCAATGGCCATTACTTTTCTCCATTGTTTCTGAACTTTTCGGACTCAAATACTACGCTACTCTCTACAATTTCGGATCCGTGGCTAGCCCAGTTGGACTTTACGTCCTCAACGTGAAAGTGGCAGGATATTTATACGACAAGGAAGCTCATAAACAGCTTTCTGCAGCGAATTTGGTCAGAAAAAAGGGCGAAGAACTGGTTTGCAATGGGGTCAATTGCTTTAAATTATCTTTCATTATAATCACAGCCGCGACGCTGTTTGGGACGTTTGTTTCTCTGGTTTTAGTGATGAGGACGAAGAAGTTTTACAAAAGTGACATTTATAAGAAGTTTAGAGAGGAAGAAGCTAAGCTTTCTGAGTCGTCAATGGCGGACTCTGATTCTAACGGTCTGGTTCAGATGCAGAAATATGGAGAAAGGGATGGAAGAGAATACAAGCATTGA 1815 46.5 MESSSSPNGGWTRSTAKTFAVQTLKGSWFMIFATFLIMSMAGIPYLFGLYSGTIKSVLGYDQTTLNFVSFFKDVGTTVGVLAGLINEVTPPWAVLAMGAVLNFFGYFMIWLSVTKKIPTKVWLMCLYICVGANATTFANTGALVTCVKNYPERRGVVIGILKGYMGLSGAIVTQLYHAIYGNDAKTFLLLLGWLPAAVSFVFLPTVRIMKVSHQPNELKVFYNFLYISLGLAGFIMLMIILQQKYSFTHGGYSGSASMVVFLLLLPLAVVLYEEYKLWKKKMLVVNDPSPLTIVAQEAKNSQIFHESKDVLIKSSSENLKPAHKWWENVFKPPQRGDDFTILQALFSFDMLLLFIATACGVGGTLTAIDNLGQIGASLNYPKKSISTFVSLVSIWNYLGRVFAGFSSEMLLTEYKFPRPLMLTFVLLLSCVSHLLIAFDPPGGLYIASILTGFCYGAQWPLLFSIVSELFGLKYYATLYNFGSVASPVGLYVLNVKVAGYLYDKEAHKQLSAANLVRKKGEELVCNGVNCFKLSFIIITAATLFGTFVSLVLVMRTKKFYKSDIYKKFREEEAKLSESSMADSDSNGLVQMQKYGERDGREYKH 604
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 2654455 2656269 + Bma016638.1 Bma03g00359 79032
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma03g00359 604 SUPERFAMILY MFS general substrate transporter 227 560 IPR036259 -
Bma03g00359 604 MobiDBLite consensus disorder prediction 574 604 - -
Bma03g00359 604 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 13 587 - -
Bma03g00359 604 SUPERFAMILY MFS general substrate transporter 21 206 IPR036259 -
Bma03g00359 604 CDD MFS_Mch1p_like 28 546 - -
Bma03g00359 604 Pfam Major Facilitator Superfamily 357 557 IPR011701 GO:0022857|GO:0055085
Bma03g00359 604 Pfam Nodulin-like 28 270 IPR010658 -
Bma03g00359 604 PANTHER MFS TRANSPORTER 13 587 - -
Bma03g00359 604 Gene3D MFS general substrate transporter like domains 346 562 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g00359 Bma-Chr3:2654455 Bma12g01012 Bma-Chr12:42196598 3.65E-110 dispersed
Bma03g00359 Bma-Chr3:2654455 Bma03g00360 Bma-Chr3:2672057 0 tandem
Bma11g00195 Bma-Chr11:1750042 Bma03g00359 Bma-Chr3:2654455 0 wgd
Bma03g00062 Bma-Chr3:512202 Bma03g00359 Bma-Chr3:2654455 0 wgd
Bma03g00359 Bma-Chr3:2654455 Bma08g00921 Bma-Chr8:48186928 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma03g00359 - - csv:101205503 853.973