Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma03g00360 ATGGAGTTCTCCTCGTCCCCTAACGGAGGATGGACCCGATCTACTGCGAAAACCTTCGCAGTTCAGACACTGAAAGGGTCCTGGTTCATGATCTTCGCCACCTTCCTCATCATGTCTATGGCCGGAATTCCCTACCTCTTCGCGCTTTACTCCGGTACCGTCAAATCGGTGCTTGGTTACGATCAGACCACGCTGAACTTCGTTAGTTTCTTCAAAGACGTCGGAACTACCGTCGGCGTCCTCGCCGGACTTATTAACGAGGTTACGCCCCCGTGGGCGGTGCTCGCCATGGGAGCAGTGCTCAACTTTTTCGGCTACTTTATGATCTGGCTTTCTGTGACGGAGAAAATCCCGACCAAAGTATGGCTAATGTGTTTATACATCTGCGTCGGAGCTAATGCGACGACGTTTGCCAATACCGGAGCTCTGGTCACTTGCGTGAAGAACTACCCGGAGAGACGAGGGGTCGTGATCGGAATTCTGAAAGGCTATGTGGGTTTGAGCGGGGCGATTGTTACTCAACTGTACCATGCGATTTACGGAAACGACGCAAAGACTTTTCTTCTGCTTCTCGGGTGGCTACCGGCGGCGGTTTCCTTCGTTTTCTTACCGACGGTGAGAATTATGAAGGTTTCTCACCAGCCAAACGAACTCAAAGTTTTCTATAATTTCCTTTATATTTCTCTCGGCCTTGCTGGGTTTATTATGCTCATGATTATTCTGCAACAAAAATATTCGTTTAATCACGGTGGTTACAGCGGAAGTGCGTCAATGGTGGTTTTCCTTCTCTTGCTTCCATTGGCAGTCGTTCTTTACGAAGAATACAAGCTTTGGAAGAAGATGTTGGCGGTAAACGACCCTTCGCCGTTAACCATCGTCGCCCAAGAAGCCAAAAACTCTCAAATTTTTCACGAATCAAAGGATGTTCTGATCAAATCAAGCTCGGAAAATCTGAAACCAGCACATAAGTGGTGGGAAAACGTGTTTAAACCTCCACAAAGAGGAGATGACTTCACGATTCTCCAAACTCTTTTTAGCTTCGATATGCTTCTTCTCTTCCTCGCTACGGCATGTGGAGTAGGAGGAACGTTGACCGCTATTGATAACCTCGGACAAATCGGAGCTTCCTTGAATTACCCGAAAAAAAGCATAAGCACCTTCGTCTCTCTCGTGAGCATCTGGAATTATCTCGGTCGAGTTTTCGCCGGTTTCTCTTCTGAAATGCTACTGACAGAATATAAATTCCCTCGTCCATTAATGCTCACCTTCGTCCTCCTCCTTTCCTGCGTCAGCCACCTTCTCATCGCCTTCGACCCGCCCGGTGGCCTCTACATCGCCTCCATTCTCACCGGTTTCTGCTACGGAGCTCAATGGCCATTACTTTTCTCCATTGTTTCTGAACTTTTCGGACTCAAATACTACGCTACTCTCTACAATTTCGGATCCGTGGCTAGCCCAGTTGGACTTTACGTCCTCAACGTGAAAGTGGCAGGATATTTATACGACAAGGAAGCTCATAAACAGCTTTCTGCAGCGAATTTGGTCAGAAAAAAGGGCGAAGAACTGGTTTGCAATGGGGTCAATTGCTTTAAATTATCTTTCATTATAATCACAGCCGCGACGCTGTTTGGGGCATTTGTTTCTCTGGTTTTAGTGATGAGGACGAAGAAGTTTTACAAAAGTGACATTTATAAGAAGTTTAGAGAGGAAGAAGCTAAGCTTTCTGAGTCGTCAATGGCGGACTCTGATTCTTACGGTCTGGTTCAGATGCAGAAATATGGAGAAAGGGATGGAAGAGAATACAAGCACTGA 1812 46.74 MEFSSSPNGGWTRSTAKTFAVQTLKGSWFMIFATFLIMSMAGIPYLFALYSGTVKSVLGYDQTTLNFVSFFKDVGTTVGVLAGLINEVTPPWAVLAMGAVLNFFGYFMIWLSVTEKIPTKVWLMCLYICVGANATTFANTGALVTCVKNYPERRGVVIGILKGYVGLSGAIVTQLYHAIYGNDAKTFLLLLGWLPAAVSFVFLPTVRIMKVSHQPNELKVFYNFLYISLGLAGFIMLMIILQQKYSFNHGGYSGSASMVVFLLLLPLAVVLYEEYKLWKKMLAVNDPSPLTIVAQEAKNSQIFHESKDVLIKSSSENLKPAHKWWENVFKPPQRGDDFTILQTLFSFDMLLLFLATACGVGGTLTAIDNLGQIGASLNYPKKSISTFVSLVSIWNYLGRVFAGFSSEMLLTEYKFPRPLMLTFVLLLSCVSHLLIAFDPPGGLYIASILTGFCYGAQWPLLFSIVSELFGLKYYATLYNFGSVASPVGLYVLNVKVAGYLYDKEAHKQLSAANLVRKKGEELVCNGVNCFKLSFIIITAATLFGAFVSLVLVMRTKKFYKSDIYKKFREEEAKLSESSMADSDSYGLVQMQKYGERDGREYKH 603
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 2672057 2673868 + Bma016639.1 Bma03g00360 79033
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma03g00360 603 PANTHER MFS TRANSPORTER 13 583 - -
Bma03g00360 603 Gene3D MFS general substrate transporter like domains 338 561 IPR036259 -
Bma03g00360 603 SUPERFAMILY MFS general substrate transporter 226 559 IPR036259 -
Bma03g00360 603 SUPERFAMILY MFS general substrate transporter 21 207 IPR036259 -
Bma03g00360 603 Pfam Nodulin-like 28 270 IPR010658 -
Bma03g00360 603 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 13 583 - -
Bma03g00360 603 CDD MFS_Mch1p_like 28 545 - -
Bma03g00360 603 Pfam Major Facilitator Superfamily 369 556 IPR011701 GO:0022857|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g00062 Bma-Chr3:512202 Bma03g00360 Bma-Chr3:2672057 0 dispersed
Bma03g00360 Bma-Chr3:2672057 Bma08g00921 Bma-Chr8:48186928 0 dispersed
Bma03g00359 Bma-Chr3:2654455 Bma03g00360 Bma-Chr3:2672057 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma03g00360 - - csv:101205503 849.351