Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma03g00369 ATGACAGAAGCTATGGGTGCTGTTTTAACCTATAGACACGAACTGGGAATGAACTACAATTTCATTCGTCCAGATCTTATTGTGGGCTCATGTCTTCAGACTCCACAAGATGTCGATAAGCTTCGACAAATAGGAGTGAAAACAATATTTTGCTTGCAGCAAGATTCAGATTTGGAATATTTTGGGGTTGATATTAGTGCCATAAGGGAGTATGCAAAGACATTTGATGACATTGAGCATTTGCGTGCTGAGATAAGGGATTTTGATGCGTATGATTTGCGCTTGAGATTGCCATCGGTTATTAGCAAATTATTCAAGGTCATAAACAGGAATGGAGGCGTGACTTATATACATTGCACAGCTGGGCTTGGGAGAGCTCCTGCTGTTGCGTTGGCATATATGTTCTGGGTTCAAGGCTACAAACTTAACCAAGCTCACGAATTGTTGCTGAGCAAACGCTTCTGCTTCCCAAAACTGGACGCCATAAAAAGTGCAACTGCTGATATTCTTGCAGGCTTCAGGAAGAAACTTGTGACTTTGAAATGGAAAGATTACAAGTGCTCAACTGTAGAAATTTCTGGTCTTGATATTGGGTGGGGCCAGAGATTGCCTTTAAAATTAGGCGATGAACAGGGTTTGTGGATTCTCAATAGGGAATTACCGGAAGGACAATATGAATACAAGTACATTGTGGACGGCAAATGGACGTGTAATGAAAATGAGCCAGTTACCACTCCCAACAAAGATGGCCACGTTAACAATTTTATTCAAGTCCTGGACGACAATCCGAAAAGTGAAAGTACAACCCTGCAGAAGAGGCTGAGTGGCGATGATCCGGATCTCACGACCGAGGAAAGATGGAAAATAAGGCAATTTCTTGATGGAAAGTGA 891 42.09 MTEAMGAVLTYRHELGMNYNFIRPDLIVGSCLQTPQDVDKLRQIGVKTIFCLQQDSDLEYFGVDISAIREYAKTFDDIEHLRAEIRDFDAYDLRLRLPSVISKLFKVINRNGGVTYIHCTAGLGRAPAVALAYMFWVQGYKLNQAHELLLSKRFCFPKLDAIKSATADILAGFRKKLVTLKWKDYKCSTVEISGLDIGWGQRLPLKLGDEQGLWILNRELPEGQYEYKYIVDGKWTCNENEPVTTPNKDGHVNNFIQVLDDNPKSESTTLQKRLSGDDPDLTTEERWKIRQFLDGK 296
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 2743839 2748415 - Bma016648.1 Bma03g00369 79042
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma03g00369 296 CDD E_set_AMPKbeta_like_N 178 258 - -
Bma03g00369 296 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 15 160 IPR029021 -
Bma03g00369 296 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 95 153 IPR000387 GO:0016311|GO:0016791
Bma03g00369 296 Pfam Dual specificity phosphatase, catalytic domain 66 156 IPR000340 GO:0008138|GO:0016311
Bma03g00369 296 PANTHER DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN 1 294 - -
Bma03g00369 296 ProSiteProfiles Dual specificity protein phosphatase domain profile. 18 175 IPR020422 GO:0006470|GO:0008138
Bma03g00369 296 Gene3D Immunoglobulins 173 264 IPR013783 -
Bma03g00369 296 PANTHER PHOSPHOGLUCAN PHOSPHATASE DSP4, CHLOROPLASTIC 1 294 IPR030079 GO:0005982|GO:0007623|GO:0019203
Bma03g00369 296 SUPERFAMILY E set domains 177 259 IPR014756 -
Bma03g00369 296 CDD DSP_laforin-like 17 164 IPR045204 GO:0019203|GO:0046838
Bma03g00369 296 Pfam Glycogen recognition site of AMP-activated protein kinase 178 261 IPR032640 -
Bma03g00369 296 SMART dsp_5 18 168 IPR020422 GO:0006470|GO:0008138
Bma03g00369 296 Gene3D Protein tyrosine phosphatase superfamily 11 292 IPR029021 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00998 Bma-Chr1:10053479 Bma03g00369 Bma-Chr3:2743839 1.33E-33 dispersed
Bma03g00203 Bma-Chr3:1549497 Bma03g00369 Bma-Chr3:2743839 1.24E-43 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma03g00369 - - zju:107413253 518.079