Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma03g00379 | TACGAGAAAGTTGAGAAGATCGGTGAAGGAACCTATGGCGTCGTTTACAAGGCTCGTGACCGGGTCACAAATGAAACCATTGCATTGAAGAAGATTCGCTTGGAGCAGGAAGACGAGGGAGTACCTAGCACAGCTATACGAGAAATTTCGCTCTTGAAAGAAATGCAACATGGAAACATTGTTAGGTTACAAGATGTAGTTCACAGTGAAAAGCGGTTGTATCTTGTTTTTGAATACCTGGACTTGGATCTAAAGAAGCACATGGATTCCTCTCCAGAATTTGCCAAGGATCTGCGTCAAATTAAAATGTTCGTTTACCAAATTCTTCGTGGCATTGCTTATTGTCATTCTCACAGAGTACTCCATAGGGATCTGAAACCTCAAAATTTGCTGATAGACCAGCGTACTAACGCTCTAAAGCTTGCTGATTTTGGACTAGCCAGAGCATTTGGTATTCCTGTTAGGACATTTACACATGAGGTTGTGACGCTTTGGTACAGAGCTCCAGAAATATTGCTTGGATCCCGTCACTACTCCACCCCGGTTGATGTGTGGTCTGTGGGTTGTATATTTGCAGAGATGCTAAACCAACGACCATTATTCCCTGGGGACTCAGAGATTGATGAATTGTTTAAGATATTCAGAGTCCTGGGCACTCCAAACGAGGATACTTGGCCTGGAGTTACTTCTTTGCCTGATTTTAAGTCAGCCTTCCCCAAGTGGCCTTCTAAGGACATGGCTTCTGTAGTTCCAAGTCTTGAAGCAACTGGTGTTGATCTTCTTTCTAAAATGCTCTGCTTGGATCCCAGCAAACGAGTTACAGCCAGGAGTGCTCTCGAGCATGAATACTTTAAGGACGTCGGATTTGTACCCTGA | 876 | 43.95 | YEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPEFAKDLRQIKMFVYQILRGIAYCHSHRVLHRDLKPQNLLIDQRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMLNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKDMASVVPSLEATGVDLLSKMLCLDPSKRVTARSALEHEYFKDVGFVP | 291 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 2882032 | 2886171 | + | Bma016657.1 | Bma03g00379 | 79052 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma03g00379 | 291 | CDD | STKc_CDK1_CdkB_like | 1 | 284 | - | - | |
Bma03g00379 | 291 | Pfam | Protein kinase domain | 1 | 284 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma03g00379 | 291 | Gene3D | Phosphorylase Kinase; domain 1 | 1 | 81 | - | - | |
Bma03g00379 | 291 | SUPERFAMILY | Protein kinase-like (PK-like) | 1 | 287 | IPR011009 | - | |
Bma03g00379 | 291 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 120 | 132 | IPR008271 | GO:0004672|GO:0006468 | |
Bma03g00379 | 291 | Gene3D | Transferase(Phosphotransferase) domain 1 | 83 | 289 | - | - | |
Bma03g00379 | 291 | ProSiteProfiles | Protein kinase domain profile. | 1 | 284 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma03g00379 | 291 | PANTHER | CELL DIVISION PROTEIN KINASE | 1 | 288 | - | - | |
Bma03g00379 | 291 | ProSitePatterns | Protein kinases ATP-binding region signature. | 7 | 30 | IPR017441 | GO:0005524 | |
Bma03g00379 | 291 | SMART | serkin_6 | 1 | 284 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma03g00379 | 291 | PANTHER | - | 1 | 288 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma03g00379 | Bma-Chr3:2882032 | Bma15g00419 | Bma-Chr15:4536492 | 1.29E-115 | dispersed | |
Bma07g01010 | Bma-Chr7:40401383 | Bma03g00379 | Bma-Chr3:2882032 | 1.47E-66 | dispersed | |
Bma14g00111 | Bma-Chr14:1479448 | Bma03g00379 | Bma-Chr3:2882032 | 4.18E-66 | dispersed | |
Bma01g00022 | Bma-Chr1:345531 | Bma03g00379 | Bma-Chr3:2882032 | 4.39E-90 | transposed | |
Bma03g00379 | Bma-Chr3:2882032 | Bma08g01208 | Bma-Chr8:51074399 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
66389 | PF00069 | Pkinase | 6.90E-81 | CL0016 | Bma | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma03g00379 | K02206 | - | vvi:100262312 | 568.54 |