Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma03g00379 TACGAGAAAGTTGAGAAGATCGGTGAAGGAACCTATGGCGTCGTTTACAAGGCTCGTGACCGGGTCACAAATGAAACCATTGCATTGAAGAAGATTCGCTTGGAGCAGGAAGACGAGGGAGTACCTAGCACAGCTATACGAGAAATTTCGCTCTTGAAAGAAATGCAACATGGAAACATTGTTAGGTTACAAGATGTAGTTCACAGTGAAAAGCGGTTGTATCTTGTTTTTGAATACCTGGACTTGGATCTAAAGAAGCACATGGATTCCTCTCCAGAATTTGCCAAGGATCTGCGTCAAATTAAAATGTTCGTTTACCAAATTCTTCGTGGCATTGCTTATTGTCATTCTCACAGAGTACTCCATAGGGATCTGAAACCTCAAAATTTGCTGATAGACCAGCGTACTAACGCTCTAAAGCTTGCTGATTTTGGACTAGCCAGAGCATTTGGTATTCCTGTTAGGACATTTACACATGAGGTTGTGACGCTTTGGTACAGAGCTCCAGAAATATTGCTTGGATCCCGTCACTACTCCACCCCGGTTGATGTGTGGTCTGTGGGTTGTATATTTGCAGAGATGCTAAACCAACGACCATTATTCCCTGGGGACTCAGAGATTGATGAATTGTTTAAGATATTCAGAGTCCTGGGCACTCCAAACGAGGATACTTGGCCTGGAGTTACTTCTTTGCCTGATTTTAAGTCAGCCTTCCCCAAGTGGCCTTCTAAGGACATGGCTTCTGTAGTTCCAAGTCTTGAAGCAACTGGTGTTGATCTTCTTTCTAAAATGCTCTGCTTGGATCCCAGCAAACGAGTTACAGCCAGGAGTGCTCTCGAGCATGAATACTTTAAGGACGTCGGATTTGTACCCTGA 876 43.95 YEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPEFAKDLRQIKMFVYQILRGIAYCHSHRVLHRDLKPQNLLIDQRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMLNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKDMASVVPSLEATGVDLLSKMLCLDPSKRVTARSALEHEYFKDVGFVP 291
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 2882032 2886171 + Bma016657.1 Bma03g00379 79052
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma03g00379 291 CDD STKc_CDK1_CdkB_like 1 284 - -
Bma03g00379 291 Pfam Protein kinase domain 1 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma03g00379 291 Gene3D Phosphorylase Kinase; domain 1 1 81 - -
Bma03g00379 291 SUPERFAMILY Protein kinase-like (PK-like) 1 287 IPR011009 -
Bma03g00379 291 ProSitePatterns Serine/Threonine protein kinases active-site signature. 120 132 IPR008271 GO:0004672|GO:0006468
Bma03g00379 291 Gene3D Transferase(Phosphotransferase) domain 1 83 289 - -
Bma03g00379 291 ProSiteProfiles Protein kinase domain profile. 1 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma03g00379 291 PANTHER CELL DIVISION PROTEIN KINASE 1 288 - -
Bma03g00379 291 ProSitePatterns Protein kinases ATP-binding region signature. 7 30 IPR017441 GO:0005524
Bma03g00379 291 SMART serkin_6 1 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma03g00379 291 PANTHER - 1 288 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g00379 Bma-Chr3:2882032 Bma15g00419 Bma-Chr15:4536492 1.29E-115 dispersed
Bma07g01010 Bma-Chr7:40401383 Bma03g00379 Bma-Chr3:2882032 1.47E-66 dispersed
Bma14g00111 Bma-Chr14:1479448 Bma03g00379 Bma-Chr3:2882032 4.18E-66 dispersed
Bma01g00022 Bma-Chr1:345531 Bma03g00379 Bma-Chr3:2882032 4.39E-90 transposed
Bma03g00379 Bma-Chr3:2882032 Bma08g01208 Bma-Chr8:51074399 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66389 PF00069 Pkinase 6.90E-81 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma03g00379 K02206 - vvi:100262312 568.54