Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma03g00405 ATGGAGAAGCTCAGATGCTGCAACGGCTTCCTGGAAAACTCTAAACCCTACTTTGCTATGATCTCTCTGCAATTTGGATACGCCGGAATGAATATAATCACCAAAGTTTCTCTGAACAGAGGGATGAGTCATTATGTTCTTGTCGTCTACCGCCATGCCTTCGCCACTCTGGCTATAGCTCCCTTTGTTCTTTTCTTCGAGAGGAGGGGGCAGCCGAAAATAACATTCAAAGTTTTCATGCAGATATTCGCTCTTGCTCTACTTGGGCCTGTTATTGATCAAAACTTCTACTACGCCGGTCTGAAGTACACTTCGCCGACTTTCTCGTGTGCTATGAGCAACATGCTACCAGCAATGACATTTGTCATGGCAGTGATATTTAGTAGGATGGAGAAGGTGAATATAAGAAAGGTTAGATGCCAAGCGAAAATAGCTGGAACTTTGGTGACGGTGGCCGGAGCTATGTTGATGACCTTATACAAAGGAAATATTGTAGAGATGCCTTGGTCGAAGCATGTTCATCCGAGATATGCTTCTGAAAGTACTGAATCAAGCAGCAAGGACTGGTTCAAAGGCTCCATTTTCGTCATCATTGCTACACTTGCTTGGTCTTCTCTCTTTATTTTACAGAACCAAGCTTTGAAGACGTACAAGAATCATCAATTCTCACTCACAACGTTGGTGTGCTTTGTCGGGACTTTACAAGCTATTGCTGTGACTTTTGTAATGGAACGTAAATCCTCTGTTTGGAGAATTGGCTGGGACATGAACCTCCTTGCTGCTGCCTATGCTGGTATTATAACTTCAAGTCTGTCTTATTACATCCAAGGGTTGGTAATGAGAAAAAGAGGTCCAGTTTTTGCAACTGCTTTCAGCCCTCTGATGATGATCATAGTAGCATTCATGGGCTCTTTCATTCTGGCAGAAAAGCTCTATCTTGGAGGGGTTCTTGGAGCTATTTTGATAGTGATTGGACTTTACTCAGTTTTGTGGGGAAAACATAAGGAAAAGAACTTAGACAGCAAAGAGGAAGACGAAATTCCAGAGGCAATAAAGGGTCCTCACTCAAATGGAAGTGTGATTTCCATCATAGAAATGGAAGCCAATGAAGTCCAAATGGAAAAAAACAAAGAAGCTAACAAACTATCATCCATGGCCTATCAGCATTCCTAG 1173 42.46 MEKLRCCNGFLENSKPYFAMISLQFGYAGMNIITKVSLNRGMSHYVLVVYRHAFATLAIAPFVLFFERRGQPKITFKVFMQIFALALLGPVIDQNFYYAGLKYTSPTFSCAMSNMLPAMTFVMAVIFSRMEKVNIRKVRCQAKIAGTLVTVAGAMLMTLYKGNIVEMPWSKHVHPRYASESTESSSKDWFKGSIFVIIATLAWSSLFILQNQALKTYKNHQFSLTTLVCFVGTLQAIAVTFVMERKSSVWRIGWDMNLLAAAYAGIITSSLSYYIQGLVMRKRGPVFATAFSPLMMIIVAFMGSFILAEKLYLGGVLGAILIVIGLYSVLWGKHKEKNLDSKEEDEIPEAIKGPHSNGSVISIIEMEANEVQMEKNKEANKLSSMAYQHS 390
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3065559 3067546 - Bma016684.1 Bma03g00405 79078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma03g00405 390 Pfam EamA-like transporter family 16 157 IPR000620 GO:0016020|GO:0016021
Bma03g00405 390 Pfam EamA-like transporter family 191 330 IPR000620 GO:0016020|GO:0016021
Bma03g00405 390 SUPERFAMILY Multidrug resistance efflux transporter EmrE 231 336 - -
Bma03g00405 390 PANTHER WAT1-RELATED PROTEIN 10 367 IPR030184 GO:0016021|GO:0022857
Bma03g00405 390 PANTHER WAT1-RELATED PROTEIN 10 367 - -
Bma03g00405 390 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 161 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00742 Bma-Chr1:6828221 Bma03g00405 Bma-Chr3:3065559 1.30E-81 dispersed
Bma01g01426 Bma-Chr1:24211279 Bma03g00405 Bma-Chr3:3065559 4.42E-23 dispersed
Bma03g00405 Bma-Chr3:3065559 Bma04g01450 Bma-Chr4:49702076 0 dispersed
Bma14g00835 Bma-Chr14:9363049 Bma03g00405 Bma-Chr3:3065559 5.11E-68 dispersed
Bma03g00405 Bma-Chr3:3065559 Bma01g02646 Bma-Chr1:83962891 1.41E-121 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma03g00405 - - dzi:111295021 597.045