Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma03g00457 AGTAGTGAGGAATTCCAGGCCTTTGCTTCTTTTCAGTCAAGCAATTCAACTCCAGTTATTATTATCTCAATGAGGGTATCAACTTCTACTCGGTTGGAGGAGTTTGATGATATGAGACTGGAAAGCAGGGAAGCCATTGTTCCTGAATATGCTTTTTCAAGGGACGACAGTGAGGGAATGGAGGATAGTATTTATCCGATCAATGAGGACTCTCCATATGTTAAGAATATCATAACAGTTGAAAACAGACCCTCAATAGGAAGTGAAGATAGTAATATTATGGGTTTGCCTTTGTCTTCAATCTCTATTTTACATAGTAAAAGTAGGTGGGATGACACATCATTTTACAAGGGAAAGAAGATGCATCAGTCTTGGTTTCAACTACCAAATGGAAATTGGGAGCTGGCAAAGATATTATCATCCACAGGAACTGAATCTGTTATTTCACTGCTTGATGGGAGAGTCTTAAAGATTAAATCTGAAAGTTTGATAGCTGGGAATCCGGATATCCTTCTTGGAGTGGACGATCTAATGCAACTAAGCTATTTAAATGAGCCATCAGTTTTGTATAATCTTCAATACAGATACAATCAAGACATAATCTATACAAAAGCTGGTCCCGTTTTGGTTGCTATCAACCCCTTCAAGAAAGTTTTTTTATACGGAGATGATTTTGTCAAAGCATATAAGCAAAAATTGGTCGAAACTCCACATGTGTATGCCATTACTGATACAGCCATTCGAGAAATGATTCGAGGTTGTTCATGTTGTCTTTATATTTCATTTGGTGGAGAAAGTGGAGCAGGAAAGACTGAAACAGCAAAAATAGCAATGCAATATCTGGCTGCCATTGGGGGTGGAAGCGGAATAGAGTATGAAATATTGAAGACAAATCCAATCTTAGAAGCTTTTGGAAATGCAAAAACATTGAGAAATGACAACTCAAGTCGCTTTGGAAAATTGATTGAAATCCATTTTAGTGAAACGGGAAAAATATCGGGTGCTAATATTAAAACATGTAATTTCTTATTCAAATATGTTATTCGACAGTGTAGAGTGGTTCAGTGCATGGAAGAGGAGAGGTCTTATCATATTTTTTACCACCTTTGTAATGGGGCGCCAACTTCTCTTAGAGCAGAGATGCTGAATTTGAAGAGCGCCGATGAGTATAAATATTTGAAACAGAGCAATTGCTATTCAATAACTGGGGTTGATGATAGGGAACAATTTCGTGTTGTTGTGGAAGCATTAGATGTGGTCCATATAAACAAACAAGACCAGCAAAGTACATTTGCAATGCTTGCTGCAGTGCTTTGGCTGGGAAACATTTCCTTTACTGTTATAGACAATGAGAGCCATGTAGAGCCGGTTGCTCATTTCATTTCAGCTCTATCTACTGTTGCTAAACTTCTTGGATGCAAGATAGAAGACCTTATGGTAGCTTTATCAACTCGAAAAATGAGCGTTGGCAATGACGAGATTGTTCAAAAGCTTACATTTTCACAGGCAAATGACGCCAGAGATGCTTTAGCAAAGTCAATTTATGCTTGTCTTTTTGAATGGCTGGTAGAACAAATTAATAAATCTCTTGCCGTAGGCAAACGCCGCACTGGAAGATGCATTAGCATTCTTGATATTTACGGCTTCGAATCATTTGACAAGAATAGTTTTGAACAGTTCTGCATAAATTATGCAAACGAAAGATTGCAGCAACACTTTAATCGCCATCTATTCAAGCTAGAGCAGGAGGAATACATTCAAGATGGCATTGACTGGACAAAAGTTGAGTTTGAAGACAATCAAGACTGTCTGAGTCTTTATGAAAAGAGACCCCTGGGGTTGTTGTCTCTGTTAGATGAGGAGGCTACATTTCCAAATGGGAGTGATTTGACTTTCGCCAACAAGCTCAAGCAACACCTTAATTCTAAAGCTTGTTTCAGAGGAGAACGAGACAAGGCATTTACTGTCTCTCACTATGCAGGAGAGGTTACATATGACACGACTGGCTTTTTGGAGAAGAACAGGGACTCATTGCTCCTGGATTCTATTCAACTCCTATCATCCTGCTCTTGCCAACTTCCTCAACTATTTGCATTCAAGATGCTTAGTCAGTGTGACAAGCCTGTAGCTGGTCCTTTACATAAATCGGGCGGTGCAGAATCGCAGAAACAAAGTGTTGCAACGAAATTTAAGGGTCAATTGTTTCAATTGATGCAACGTCTAGAGAATACTACCCCGCATTTCATTCGTTGCATCAAGCCTAATAATTCTCAACGCCCTGGATTGTATGAACAAAGATTGGTACTAGAACAGTTGAGATGTTGTGGGGTCCTAGAAGTGGTCAGAATATCCAGATCAGGATTTCCTACCAGAATGTCTCACCAAAAGTTTGCCAGAAGATATGGTTTTCTTCTTCTGAAAAGTGCTGTCTCTCACGACCCGCTTAGCGTCTCAGTTGCGATCCTGCAGCAGTTCAAGATATTACCAGACATGTACCAAGTTGGCTACACAAAATTGTTTTTCCGAACTGGACAGATCGGGGTGCTCGAGGATACGAGAAGCCGCACCCTCCACGGCATTTTACTTGTTCAAAGCTGCTTCAGAGGGCACCAAGCTCGTCGACGATACAAGGAGCTGAGGAGAGGAATTCTCACTCTTCAGTCATTTGTACGTGGACAGAGAACCAGAAAGGAAATTGCCTGTTTGCTACGGAGACACAGAGCTGCCATATCCGTTCAAAAGTGGACGAAAGCAAAGATCGCTCGAAAAGAATTGAACAATATTCGCTGTGCGTCGTTAAAGATACAATCAGTTATTCGTGGCTTTATGGTTAGACGATGCGCCGGCGGAGATATTGGACAACTAGGAAAACCTGAGTGCCAAAAGACGGACGAGGTTCCGGTGAGGTCGCATTTTCTGGCAGAATTACATCGACGTGTTTTCAAAGCAGAGGCTGCGTTGAGAGAAAAAGAAGAGGGAAACGACATCCTCCATCAACGCCTTCAACAATACGAAAGCCGTTGGGTGGAATACGAGCTGAAAATGAGGTCGATGGAAGAGACGTGGCAGAAACAAATGAGGTCCTTACAATCGAGTCTCTCCAATGCAAAGAAGAGCATAGGGACTGACGGTTCCGAGAGAAATTCCGATGCGTCAGTCAATGCTGGCGACGACAGGCATTTGAGCTGGGACGCGAGCGTAAACAACGAAGTTCAAGAGATTCAGCCGGTGAGCGGAGGTTTGAGCGCTATAAGCCGGTTGGCTGAAGAATTCGAGCAGAGAAAGCAAGTGTTCGGAGACGACGCCAAGTTTCTGGTGGAGGTGAAGTCCGGACAGGTGGAGGCGAGTTTGGACGCAGATAGAGAACTGATAAGGTTGAAGCGGATGTTTGAATCTTGGAAGAAAGATTACGGGGCGAGGCTGCGTGAGACGAGCTTGATTTTGAACAAACTTGGAAACGACGGAGGCGTCGATCGCGGAAGAAAGAAGTGGTGGGGGAGGAAGAACAGCTTGAGGTTTGATTCCTGA 3528 42.29 SSEEFQAFASFQSSNSTPVIIISMRVSTSTRLEEFDDMRLESREAIVPEYAFSRDDSEGMEDSIYPINEDSPYVKNIITVENRPSIGSEDSNIMGLPLSSISILHSKSRWDDTSFYKGKKMHQSWFQLPNGNWELAKILSSTGTESVISLLDGRVLKIKSESLIAGNPDILLGVDDLMQLSYLNEPSVLYNLQYRYNQDIIYTKAGPVLVAINPFKKVFLYGDDFVKAYKQKLVETPHVYAITDTAIREMIRGCSCCLYISFGGESGAGKTETAKIAMQYLAAIGGGSGIEYEILKTNPILEAFGNAKTLRNDNSSRFGKLIEIHFSETGKISGANIKTCNFLFKYVIRQCRVVQCMEEERSYHIFYHLCNGAPTSLRAEMLNLKSADEYKYLKQSNCYSITGVDDREQFRVVVEALDVVHINKQDQQSTFAMLAAVLWLGNISFTVIDNESHVEPVAHFISALSTVAKLLGCKIEDLMVALSTRKMSVGNDEIVQKLTFSQANDARDALAKSIYACLFEWLVEQINKSLAVGKRRTGRCISILDIYGFESFDKNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWTKVEFEDNQDCLSLYEKRPLGLLSLLDEEATFPNGSDLTFANKLKQHLNSKACFRGERDKAFTVSHYAGEVTYDTTGFLEKNRDSLLLDSIQLLSSCSCQLPQLFAFKMLSQCDKPVAGPLHKSGGAESQKQSVATKFKGQLFQLMQRLENTTPHFIRCIKPNNSQRPGLYEQRLVLEQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFLLLKSAVSHDPLSVSVAILQQFKILPDMYQVGYTKLFFRTGQIGVLEDTRSRTLHGILLVQSCFRGHQARRRYKELRRGILTLQSFVRGQRTRKEIACLLRRHRAAISVQKWTKAKIARKELNNIRCASLKIQSVIRGFMVRRCAGGDIGQLGKPECQKTDEVPVRSHFLAELHRRVFKAEAALREKEEGNDILHQRLQQYESRWVEYELKMRSMEETWQKQMRSLQSSLSNAKKSIGTDGSERNSDASVNAGDDRHLSWDASVNNEVQEIQPVSGGLSAISRLAEEFEQRKQVFGDDAKFLVEVKSGQVEASLDADRELIRLKRMFESWKKDYGARLRETSLILNKLGNDGGVDRGRKKWWGRKNSLRFDS 1175
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3464598 3472138 + Bma016735.1 Bma03g00457 79130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma03g00457 1175 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 147 902 IPR027417 -
Bma03g00457 1175 Gene3D - 361 418 - -
Bma03g00457 1175 ProSiteProfiles IQ motif profile. 858 885 IPR000048 GO:0005515
Bma03g00457 1175 Gene3D - 788 855 - -
Bma03g00457 1175 ProSiteProfiles IQ motif profile. 928 957 IPR000048 GO:0005515
Bma03g00457 1175 PANTHER MYOSIN 102 1173 - -
Bma03g00457 1175 Gene3D Myosin VI head, motor domain, U50 subdomain 419 529 - -
Bma03g00457 1175 MobiDBLite consensus disorder prediction 1033 1058 - -
Bma03g00457 1175 MobiDBLite consensus disorder prediction 1033 1051 - -
Bma03g00457 1175 SMART MYSc_2a 166 855 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bma03g00457 1175 ProSiteProfiles IQ motif profile. 879 908 IPR000048 GO:0005515
Bma03g00457 1175 PRINTS Myosin heavy chain signature 257 282 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bma03g00457 1175 PRINTS Myosin heavy chain signature 202 221 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bma03g00457 1175 PRINTS Myosin heavy chain signature 540 568 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bma03g00457 1175 PRINTS Myosin heavy chain signature 299 326 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bma03g00457 1175 PRINTS Myosin heavy chain signature 593 621 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bma03g00457 1175 ProSiteProfiles Myosin motor domain profile. 172 854 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bma03g00457 1175 Gene3D - 552 744 - -
Bma03g00457 1175 Gene3D - 859 907 - -
Bma03g00457 1175 Gene3D - 908 948 - -
Bma03g00457 1175 Pfam IQ calmodulin-binding motif 880 898 IPR000048 GO:0005515
Bma03g00457 1175 Pfam IQ calmodulin-binding motif 930 946 IPR000048 GO:0005515
Bma03g00457 1175 Pfam IQ calmodulin-binding motif 860 877 IPR000048 GO:0005515
Bma03g00457 1175 Gene3D Kinesin motor domain 173 787 IPR036961 -
Bma03g00457 1175 CDD MYSc_Myo8 186 842 IPR036022 -
Bma03g00457 1175 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 102 1173 - -
Bma03g00457 1175 SMART iq_5 904 926 IPR000048 GO:0005515
Bma03g00457 1175 SMART iq_5 927 949 IPR000048 GO:0005515
Bma03g00457 1175 SMART iq_5 855 877 IPR000048 GO:0005515
Bma03g00457 1175 SMART iq_5 878 900 IPR000048 GO:0005515
Bma03g00457 1175 Coils Coil 987 1021 - -
Bma03g00457 1175 Pfam Myosin head (motor domain) 174 842 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g00005 Bma-Chr3:124838 Bma03g00457 Bma-Chr3:3464598 0 dispersed
Bma03g00457 Bma-Chr3:3464598 Bma07g01334 Bma-Chr7:48870046 0 dispersed
Bma15g00717 Bma-Chr15:13235584 Bma03g00457 Bma-Chr3:3464598 7.63E-177 dispersed
Bma03g00457 Bma-Chr3:3464598 Bma09g00523 Bma-Chr9:41799897 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma03g00457 - K10357 cit:102621697 1654.42