Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma03g00484 ATGATTTCGAAAGGCTCTCAGCTTAACATCAGCAATTTCCGGCTGGTGAAGCGCATTGGTTATGGAGATATTGGGAGTGTGTATCTTGTTGAACTCAGAGGCAGTCAGATGGAGTTCTGTAGCGGAGGAAACCTTCACTCTCTGAGACAGAAGCAGCCCAACAAACGCTTTACAGAGGAAGCTGCCAGGTTTTATGCATCGGAGGTGCTGTTAGCTCTGGAGTATCTTCACGTGCTAGGTATTGTTTATAGAGATTTGAAGCCGGAAAATGTTCTTGTCAGAGAAGAGGGCCATATAATGCTATCCGATTTCGATCTCTCTCTTCGCTGCTCCGTCAGTCCTACCCTCGTCAAGTCCTCTTCTGTTCACCCGAGCGGCGGCGGCGGCTGCGATGCTGGCAGCATACTAGACGATGATTTCGCAGTGCAAGGTTGTATGCAGCCATCCAATTTCCTCCCTCGGATATTACCGTCCAAGAAAAATAGGAAATCTAAATCCGATTTCGGACTCTTCGTCGGCGGGTCCCTCCCGGAATTAATGGCGGAGCCAACAAACGTCCGGTCGATGTCCTTCGTAGGAACGCATGAATACTTAGCGCCTGAGATAGTACGTGGTGAGGGCCACGGAAGCGCCGTTGACTGGTGGACGTACGGAATCTTCTTGTATGAGCTTTTGCACGGGACAACTCCGTTCAAAGGATCGGAAAATCGAGCGACGCTGTTCAACGTCGTAGGACAGCCATTGAGGTTTCCAGAAACTCCACATGTGAGCTACGCAGCGAAAGATCTGATCCGAGGATTGCTAGTGAAAGAGCCGCACCGGCGAATCGCGTACAAGAGGGGGGCGACGGAGATAAAACAGCATCCATTTTTCGAGGGAGTGAACTGGGCCTTGGTTAGGAGCGCAACGCCTCCGCACATACCGGATCCTGTCGACTTTTCGCAGTTTGCCAGCAAAGAAGCGGCTCCGGCGGGCAAGAAGACGGAGGATGATCAGAGAAGTACGAACAACGCAAATACCGACGAAGGTTACGTAGACTTTGAGTACTTCTAG 1053 51.09 MISKGSQLNISNFRLVKRIGYGDIGSVYLVELRGSQMEFCSGGNLHSLRQKQPNKRFTEEAARFYASEVLLALEYLHVLGIVYRDLKPENVLVREEGHIMLSDFDLSLRCSVSPTLVKSSSVHPSGGGGCDAGSILDDDFAVQGCMQPSNFLPRILPSKKNRKSKSDFGLFVGGSLPELMAEPTNVRSMSFVGTHEYLAPEIVRGEGHGSAVDWWTYGIFLYELLHGTTPFKGSENRATLFNVVGQPLRFPETPHVSYAAKDLIRGLLVKEPHRRIAYKRGATEIKQHPFFEGVNWALVRSATPPHIPDPVDFSQFASKEAAPAGKKTEDDQRSTNNANTDEGYVDFEYF 350
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3773050 3774360 - Bma016768.1 Bma03g00484 79157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma03g00484 350 Pfam Protein kinase domain 185 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma03g00484 350 Pfam Protein kinase domain 37 113 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma03g00484 350 SUPERFAMILY Protein kinase-like (PK-like) 8 316 IPR011009 -
Bma03g00484 350 SMART serkin_6 13 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma03g00484 350 ProSiteProfiles Protein kinase domain profile. 1 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma03g00484 350 MobiDBLite consensus disorder prediction 318 345 - -
Bma03g00484 350 Gene3D Transferase(Phosphotransferase) domain 1 1 129 - -
Bma03g00484 350 PANTHER SERINE/THREONINE-PROTEIN KINASE AGC1-5 37 350 - -
Bma03g00484 350 PANTHER SERINE/THREONINE-PROTEIN KINASE AGC1-5 3 36 - -
Bma03g00484 350 PANTHER FLIPPASE KINASE 1-RELATED 37 350 - -
Bma03g00484 350 PANTHER FLIPPASE KINASE 1-RELATED 3 36 - -
Bma03g00484 350 ProSitePatterns Serine/Threonine protein kinases active-site signature. 81 93 IPR008271 GO:0004672|GO:0006468
Bma03g00484 350 Gene3D Transferase(Phosphotransferase) domain 1 185 309 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g00484 Bma-Chr3:3773050 Bma14g00904 Bma-Chr14:10219310 9.01E-146 dispersed
Bma03g00484 Bma-Chr3:3773050 Bma08g00829 Bma-Chr8:46131513 4.59E-113 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66392 PF00069 Pkinase 5.50E-22 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma03g00484 - - zju:107424533 588.571