Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma03g00490 ATGAAATGCAGATACTCGTCTTTCAACTTCGCGACTCTCTCAGACGGCCATCACTATAAGAGCTACTGCGGATCCATTCCACCGTCTCCGTCATCTCACCCGTGTTCTCTTTCTTTTTCTTTGGCCATGTCCTTCTCGCAGCCCATCAACTTTGGTGCTTCTCCTTCGCTGCTATCAGCTTCTCCGCTTCATGGAGGTGATCCAAGAGCAAAACCCAAAATCATTCCATCGTGCTTTGAAGAAACGAAAGAAAAAATTAGGCAAATGATCAATAATGTCGAACTTTCAGTTTCCTCGTATGACACTGCTTGGGTGGCCATGGTCCCCTCTCCTAACTCCCCGGATGCCCCATTTTTTCCTCAATGTGTGAACTGGTTATTGGAAAATCAGCGCAGTGACGGCTCCTGGGGCCAAGCTCATTCGAATTCGTTGTTAATGAAGGACACTCTCTCATCTACCTTAGCATGCATCATTGCTCTGAAGCGATGGGATGTTGGTTTGGAACATATGAACAAGGGTCTAGATTTTATGGATAAAAATTTAGCTCTCGCTAATAATCCGAAGCAACATTCTCCTGTTGGGTTTAATATAATTTTCCCTGGTATGATTGAGATGTCTCAAAGTTTGGGTCTGAATCTTTCCCTGGAACATTCCAGTTTAAATGCTTTGGTTCAGGAGAGAGAGTTGGAGCTTAGAAGAGGTAGAAGTGCCTATTTATCTTACATTTCTGAAGGAATTGAGAAACAAGACTGGGAAATGGTCATGAAATATCAAAGGAAAAACGGTTCGCTATTTAACTCGCCGTCGACCTCTGCCGCTGCTTTTACTCACACAAAGAATGGCGGATGTCTTAATTACCTCTGCATGCTACTAGCAAAGTTTGGCAATGCAGTTCCAACAATATATCCTCTGGACCTAACTGCTCGTTTACACACGGTCGATCACCTTCAAAGATTGGGAATTGATCAACATTTTCAGAAGGAAATCAAAAGTGTGCTTGACGAAACTTACAGATGCTGGCTGCAGGGAGATGAAGATATATTTCTTGATGTCAGCACTTGCGCTATGGCCTTCCGGTTATTACGAGTTAATGGATACGATGTTTCTTCAGATCTCCTAACTCAATATACAGAGGAAGACGAGTTTTCCAATTGTCTCGGAGGGTATCTGAATGACATTGCCTCCACTCTAGAATTATTCAAGGCTTCTCAAATTATGTTACATTCAGACGAGCATGTTCTTGAACAAGTAAATTCCTGGACGAGGAATTTCCTGAATTGCAAATTAGTAAAAAATACAACACGAAGGGATAGACTCTCCAATGACATTGAGGAAGAGGTGAAAGATGCTCTTATGTTTACCTATCATTCAACTTTGGAACGAATTTCAAACAAAAAGGCGATAGATCATTACAGCACAGACAGTACAAGAATCTTAAAAACTTCATATAGGTGCTTAAATTTTGGTCATGAAGATGTCCTAAAACTAGCAGTAGACAACTATAATACATGTCAAAGTATACATCGTAAAGAACTTGAAGATCTTGCAAGGTGGATCGTAGAGACAAAATTGGACAAGCTAAAGTTTGCCAGACAAAAACTGGAGTATTGCTACCTCTCGGCTTCGGCATCCCTTCCTTCTCCCGAACTTTCTGAATCCCGTTTATCATGGACCAAGGGCGGGGTCCTCACGACCGTAGTTGACGATTTCTTTGATGTTGGTGGCTCTGAAGAGGAACTAATTAACCTCATACAATTGGTAGAGAGGTGGGATATAAATTCAGGTGTGGATTATTGTTCAGAGGCAGTCGAGATTATATTTACAGCTCTTCATGGAACAGTTTGTGAGATTGGCGACAGAGCCTCAATACGGCAAGGGCGCCCAGTAACGAGTCACATAATTGACATATGGTTGGACCTGCTCAAGTCTATGCTGAAGGAATTCGAATGGATGAGAGACAAAGTAGTCCCACCCATGGATGATTATATGTCAAATAGTTGCATATCATTTGCCTTGGGACCTATAGTCCTTCCAGCCCTCTATTTTGTCGGTCCAAAGCTTTCGAAGGAGATAATCGGAAATGTGGAATATAGAAATCTATTTAAGCTGATGAGTACTTGCGGGCGTCTTCTCAACGATATACAGGGTTTGAGGTATAGATTACACTCAGCTAAGAGCCATTTTGTTTGTTAA 2193 41.91 MKCRYSSFNFATLSDGHHYKSYCGSIPPSPSSHPCSLSFSLAMSFSQPINFGASPSLLSASPLHGGDPRAKPKIIPSCFEETKEKIRQMINNVELSVSSYDTAWVAMVPSPNSPDAPFFPQCVNWLLENQRSDGSWGQAHSNSLLMKDTLSSTLACIIALKRWDVGLEHMNKGLDFMDKNLALANNPKQHSPVGFNIIFPGMIEMSQSLGLNLSLEHSSLNALVQERELELRRGRSAYLSYISEGIEKQDWEMVMKYQRKNGSLFNSPSTSAAAFTHTKNGGCLNYLCMLLAKFGNAVPTIYPLDLTARLHTVDHLQRLGIDQHFQKEIKSVLDETYRCWLQGDEDIFLDVSTCAMAFRLLRVNGYDVSSDLLTQYTEEDEFSNCLGGYLNDIASTLELFKASQIMLHSDEHVLEQVNSWTRNFLNCKLVKNTTRRDRLSNDIEEEVKDALMFTYHSTLERISNKKAIDHYSTDSTRILKTSYRCLNFGHEDVLKLAVDNYNTCQSIHRKELEDLARWIVETKLDKLKFARQKLEYCYLSASASLPSPELSESRLSWTKGGVLTTVVDDFFDVGGSEEELINLIQLVERWDINSGVDYCSEAVEIIFTALHGTVCEIGDRASIRQGRPVTSHIIDIWLDLLKSMLKEFEWMRDKVVPPMDDYMSNSCISFALGPIVLPALYFVGPKLSKEIIGNVEYRNLFKLMSTCGRLLNDIQGLRYRLHSAKSHFVC 730
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3851248 3855512 + Bma016772.4 Bma03g00490 79163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma03g00490 730 Pfam Terpene synthase, N-terminal domain 250 451 IPR001906 GO:0010333|GO:0016829
Bma03g00490 730 SFLD Terpene Cyclase Like 1 N-term 79 484 - -
Bma03g00490 730 Pfam Terpene synthase family, metal binding domain 494 717 IPR005630 GO:0000287|GO:0010333|GO:0016829
Bma03g00490 730 Gene3D - 88 501 IPR036965 GO:0010333|GO:0016829
Bma03g00490 730 PANTHER ENT-COPALYL DIPHOSPHATE SYNTHASE, CHLOROPLASTIC 89 718 - -
Bma03g00490 730 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 260 474 IPR008930 -
Bma03g00490 730 SUPERFAMILY Terpenoid synthases 491 717 IPR008949 -
Bma03g00490 730 CDD Terpene_cyclase_plant_C1 302 716 IPR044814 GO:0010333|GO:0016102
Bma03g00490 730 Gene3D - 96 291 - -
Bma03g00490 730 PANTHER ENT-KAUR-16-ENE SYNTHASE, CHLOROPLASTIC 89 718 - -
Bma03g00490 730 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 99 273 IPR008930 -
Bma03g00490 730 Gene3D Farnesyl Diphosphate Synthase 504 727 IPR008949 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma03g00490 Bma08g00824 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g00490 Bma-Chr3:3851248 Bma15g00601 Bma-Chr15:7586302 4.15E-79 dispersed
Bma03g00490 Bma-Chr3:3851248 Bma08g00824 Bma-Chr8:46034044 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma03g00490 K04121 - jre:108998981 844.728