Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma03g00491 ATGCCGAAAAAACTCTGTATTCTGGTTCTTCTCCTCCCTGCCATGGCTTCCGGCCAGTGTCTGTGCAGCTCCGGCGCCTCAGAACATATCGAAAATGACGCCCTCAAGTATAAATTAGCTTCTATTGCTTCTGTTCTGGTTGCGGGTGCAGTTGGAGTGAGCCTTCCTCTGTTTGGCAAGAAACTCCCGTCCTTACGACCTGAAAACGACATTTTCTTCATGATCAAGGGCTTTGCTGCCGGGGTAATTTTAGCCACTGGCTTCATACACATACTACCGGACGCATTTCAGAACTTGAACTCTCCGTGCTTGAGTAAGGAACCATGGGGAAATTTCCCGTTTGCTGGCTTCGTCGCTATGCTTTCATCCATTGGTACGCTAATGGTGGACACATTAGCTACAGTGTTGGAACTGGGGATCGGGATGGGGCTCGGTGGTTGCATCTCTCAGGCGGAATTCAAGTCCAGGTCAACGACAATAATGGCAACGTTTTTCTCCCTCACAACGCCGATCGGAATAGCGATAGGGATCGGAATATCAAGCTTCTACGAAGCGAACAACGCGAGAGCGCTGATGGTGGAAGGGATTTTGGAGTCAGCTTCGGCAGGAATACTGATTTATATGGCGCTTGTAGACCTACTGGCAGCTGATTTTATGAGCCCAAGGATGCAAGCTAACCTCGGGCTTCAATTAGGAGCCCATGTATCTCTTCTTCTCGGAGCTGGTTGTATGTCTGGCCAAATGGTACCCAAGGAAGGAGGCTAA 765 49.54 MPKKLCILVLLLPAMASGQCLCSSGASEHIENDALKYKLASIASVLVAGAVGVSLPLFGKKLPSLRPENDIFFMIKGFAAGVILATGFIHILPDAFQNLNSPCLSKEPWGNFPFAGFVAMLSSIGTLMVDTLATVLELGIGMGLGGCISQAEFKSRSTTIMATFFSLTTPIGIAIGIGISSFYEANNARALMVEGILESASAGILIYMALVDLLAADFMSPRMQANLGLQLGAHVSLLLGAGCMSGQMVPKEGG 254
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3863205 3864436 - Bma016773.1 Bma03g00491 79164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma03g00491 254 Pfam ZIP Zinc transporter 36 135 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Bma03g00491 254 Pfam ZIP Zinc transporter 140 245 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Bma03g00491 254 PANTHER METAL TRANSPORT PROTEIN 8 135 - -
Bma03g00491 254 PANTHER METAL TRANSPORT PROTEIN 141 245 - -
Bma03g00491 254 PANTHER ZINC/IRON TRANSPORTER 141 245 - -
Bma03g00491 254 PANTHER ZINC/IRON TRANSPORTER 8 135 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g00491 Bma-Chr3:3863205 Bma14g00204 Bma-Chr14:2536930 5.02E-40 dispersed
Bma03g00491 Bma-Chr3:3863205 Bma01g00924 Bma-Chr1:9022119 1.13E-23 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma03g00491 K14709 - tcc:18594962 178.333