Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma03g00492 ATGCAGCCGACGTCAAAGACATTGATGAAGGCTTCTGATGCTCCAAGAACTTCAAAATTGATAAATGGAGGCACCGCTAAAACCTCAGATGTTAAAGCATTATTATCAAAGACTGCGATAACTTTGGCATCATCTCTTTCAAAGAATACTGTTGATGAAGCTATCTTAGGAAAAGTTTCAGCTGACAAAACTTGTGACCTTAATCCAAGAGCAAGTGCAAATATTACGTCTAAGTTAAAAGCTGGCCGTAGGAGATCTTATACCTCTCTGTTAATGACAGGATCAAAGTTGGTAGAGGAATATACATCAGTTACTAAGCAAGATAAGCTACCAAGTATTGATAATGAACATAATCAACTCGAAGTTGCCGAATACGTCGAGGAAATTTATCAGTATTATTGGGTTATGGAGGCAGAAAGTCCTCCTCTGGAAAATTACCTATCAAAGCAGATGGATATTGTACCTCATATGCGGGGAATATTGATCAACTGGCTAAATGAAGTGCACTTCAAATTTGATTTGATGCATGAAACACTATTTCTTTCAATCATGTTGTTTGACCAGTATCTTTCTCAAGTCATAACTAAGAAGGATGACCTGCAATTAGTTGGTCTTACAGCTCTGTTGTTGGCTTCAAAATATGAAGACTTTTGGCATCCTAGGGTTTCAGATTTGATAAGCATTTCAGCCGAGTCTTATACAAGAGAACAAATGCTTGAAATGGTATTTATTTCTTATATTTCCCATTATATTGTTTTTTTTCAGGAAATGCTTATTCTTAAGAAGCTTAAATTTCGTCTTAATATCCCTACTCCATATCTTTTCATGTTAAGGTTTCTCAAGGCTGCTCAATCTGACAATAAGCTTGATCACCTGGCATTTTACCTCATTGAGCTATGCTTAGTTGAATATGAAGCTTTAAAGTTCAAGTCGTCGTTGCTTTGTGCGTCAGCTATTTATCTTGCAAGTGATTGCGCTGAGATGATTTTAAAATTTCAAAGATCTGCCAAATTAGGACGATCGAAAGTCACTTTTGAGAAGTATATGAAGCCTGATTTTACTAGTGTTGCAGCGATGAAACCTTTAGATGCGCTACCTTCCTAG 1104 36.59 MQPTSKTLMKASDAPRTSKLINGGTAKTSDVKALLSKTAITLASSLSKNTVDEAILGKVSADKTCDLNPRASANITSKLKAGRRRSYTSLLMTGSKLVEEYTSVTKQDKLPSIDNEHNQLEVAEYVEEIYQYYWVMEAESPPLENYLSKQMDIVPHMRGILINWLNEVHFKFDLMHETLFLSIMLFDQYLSQVITKKDDLQLVGLTALLLASKYEDFWHPRVSDLISISAESYTREQMLEMVFISYISHYIVFFQEMLILKKLKFRLNIPTPYLFMLRFLKAAQSDNKLDHLAFYLIELCLVEYEALKFKSSLLCASAIYLASDCAEMILKFQRSAKLGRSKVTFEKYMKPDFTSVAAMKPLDALPS 367
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3870749 3872892 + Bma016774.1 Bma03g00492 79165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma03g00492 367 CDD CYCLIN 157 244 IPR013763 -
Bma03g00492 367 PIRSF Cyclin_A_B_D_E 2 325 IPR039361 -
Bma03g00492 367 PIRSF Cyclin_A_B_D_E 322 367 IPR039361 -
Bma03g00492 367 MobiDBLite consensus disorder prediction 1 23 - -
Bma03g00492 367 CDD CYCLIN 268 323 IPR013763 -
Bma03g00492 367 PANTHER CYCLIN-B3-1-RELATED 2 364 - -
Bma03g00492 367 SMART cyclin_7 163 247 IPR013763 -
Bma03g00492 367 SMART cyclin_7 274 354 IPR013763 -
Bma03g00492 367 PANTHER CYCLINS 2 364 IPR039361 -
Bma03g00492 367 Pfam Cyclin, C-terminal domain 270 323 IPR004367 -
Bma03g00492 367 SUPERFAMILY Cyclin-like 269 364 IPR036915 -
Bma03g00492 367 SMART Cyclin_C_2 270 362 IPR004367 -
Bma03g00492 367 Pfam Cyclin, N-terminal domain 128 241 IPR006671 -
Bma03g00492 367 Gene3D - 142 268 - -
Bma03g00492 367 Gene3D - 128 326 - -
Bma03g00492 367 SUPERFAMILY Cyclin-like 117 268 IPR036915 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g00492 Bma-Chr3:3870749 Bma01g02408 Bma-Chr1:81648498 5.19E-56 dispersed
Bma03g00492 Bma-Chr3:3870749 Bma01g00703 Bma-Chr1:6423557 5.47E-66 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma03g00492 K21777 - zju:107424451 413.305