Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma03g00508 ATCAAAATGGCTCCAAGTTTTGAAGATGGTAACTCGCTTTTTGACTTCGTAGTCCGAGATGGAAACGGCGTCAAAGGAATGGTGGATTCCGGCCTATCCCAGGTACCAATCAGGTACATTCAACCGCCGCAAGAGCGTATCCAGAAGAATAACGCTGCCACCCTCGACCTGCCGCCAATCGATTTTTCGAAGCTCGATGGGCCTGACCACGATGCAGTGGCGGAGAGTATAGCCAGTGCTGCGGAGACTCTTGGGTTCCTTCAAGTTATTAACCATGGCGTGCCGTTGGATTTGCTCGAGTCTCTTAAAGAATCAGCACATGCCTTTTTCGGACAGCCATCGGAGAAGAAGGCTGTTTATCGCAAAGGTCATAGCCCTAGCCCCACCGTGAGCTACGGTACGAGTTTTGTGCCGGAGAAGGAAAATGCGTTGGAGTGGAAGGACTATATTAGTATGATGTATAAAAGCGACGAGGAGGCGCTTCAGTTTTGGCCGGAACAGTGCAGGGAAGTTGCTCTCGGGTACCTTAAATCATCGCTGAAAATGGTGAGAAAATTGTTAGAAGTGCTGTTGGAAAAGCTTGAGGTGACAGTAGAGGAGTCGAAAATAGATGCTCTGATTGGTATGAAGATGGTTAACATGAACTTCTACCCAACTTGTCCCAATCCGGAGCTCACGGTTGGCGTCGGCCGGCACTCAGACATGGGGACTTTAACAGTGCTGTTGCAGGACGGAATTGGTGGATTGTATGTGAAAGTTGAGGAAGACAGCGTCTCTGTTGGTAAGAAGGGGGAGTGGGTGGAGATCCCGCCTATTCCCGGCGCTCTCGTCATCAACATCGGCGATTCCTTACAGATATTGAGCAACGGGAAGTATAAAAGTGCTGAACACAGGGTTCGAACGACGAGCTCAAAGGCTCGAGTGTCGGTTCCGATCTTCACAATACCAAAAGGGGATGAGAAGATAGGGCCGTTGCCGGAGTTGGTCGAAAGAGACGGAGTGGCTCGATACAGAGAGTTTGTATTTTCGGAGTACATGAAGAACTTCTTTGCAAATGCCCATGAAGGGAAGAAGTCTCTGGATTTCGCAGCCGCCTGA 1098 49.73 IKMAPSFEDGNSLFDFVVRDGNGVKGMVDSGLSQVPIRYIQPPQERIQKNNAATLDLPPIDFSKLDGPDHDAVAESIASAAETLGFLQVINHGVPLDLLESLKESAHAFFGQPSEKKAVYRKGHSPSPTVSYGTSFVPEKENALEWKDYISMMYKSDEEALQFWPEQCREVALGYLKSSLKMVRKLLEVLLEKLEVTVEESKIDALIGMKMVNMNFYPTCPNPELTVGVGRHSDMGTLTVLLQDGIGGLYVKVEEDSVSVGKKGEWVEIPPIPGALVINIGDSLQILSNGKYKSAEHRVRTTSSKARVSVPIFTIPKGDEKIGPLPELVERDGVARYREFVFSEYMKNFFANAHEGKKSLDFAAA 365
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3951258 3952653 + Bma016789.1 Bma03g00508 79181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma03g00508 365 Pfam 2OG-Fe(II) oxygenase superfamily 211 314 IPR044861 -
Bma03g00508 365 Pfam non-haem dioxygenase in morphine synthesis N-terminal 57 166 IPR026992 -
Bma03g00508 365 PANTHER FERULOYL COA ORTHO-HYDROXYLASE 2-LIKE 4 357 - -
Bma03g00508 365 SUPERFAMILY Clavaminate synthase-like 23 356 - -
Bma03g00508 365 PANTHER OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN 4 357 - -
Bma03g00508 365 Gene3D - 13 348 IPR027443 -
Bma03g00508 365 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 202 316 IPR005123 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g00508 Bma-Chr3:3951258 Bma07g00224 Bma-Chr7:2652816 6.67E-132 dispersed
Bma03g00508 Bma-Chr3:3951258 Bma14g01935 Bma-Chr14:41293006 8.08E-64 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma03g00508 K23145 - pop:7480442 550.821