Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bma03g00515 | ATGAAGGAGCTCAGAATGTTGACTGCCCAACATCCTTTGGGCTACATGGTAATGTCAGCTGATGGAGGCCAGTTCTTAAACATGCTGTTGAAACTCATAAACGCCAAGAAGACGATGGAGATTGGCGTTTTCACTGGCTACTCCCTCCTCGCCACAGCCCTTGCTCTTCCCCATGATGGGAAGATTTTGGCTATGGATATAAACAAGGAAAACTACGAACTCGGATTACCCATCATAGAAAAAGCTGGCGTTGGCCACAAGATCGACTTCAGAGAAGGACCTGCTCTTCCATTTCTCGACCTTCTTCTTCAAGATGAGACAAACCACGGAAGCTTTGATTTTGTGTTAGTCGACGCTGATAAAGGCAACTACATAAACTACCACAAGAGGATAATCGAGTTGGTGAAGGTCGGAGGCGTCATCGGGTACGACAACACGTTATGGTATGGGTCAGTGGTGTCCCCGCCGGCGGCACCTATGGAGGACTTCGTTAGGTTTAATAGGGGGTTTGTGATGGAGTTCAACAAGGCCATTGGGGAGGACCCCAGAATAGAAATCTGCATGCTCCCCGTCGGCGACGGAATCACCATCTGCCGTCGGATTGAATGA | 609 | 48.93 | MKELRMLTAQHPLGYMVMSADGGQFLNMLLKLINAKKTMEIGVFTGYSLLATALALPHDGKILAMDINKENYELGLPIIEKAGVGHKIDFREGPALPFLDLLLQDETNHGSFDFVLVDADKGNYINYHKRIIELVKVGGVIGYDNTLWYGSVVSPPAAPMEDFVRFNRGFVMEFNKAIGEDPRIEICMLPVGDGITICRRIE | 202 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 3991540 | 3993501 | - | Bma016796.1 | Bma03g00515 | 79188 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bma03g00515 | 202 | PANTHER | CAFFEOYL-COA O-METHYLTRANSFERASE 1 | 1 | 201 | - | - | |
| Bma03g00515 | 202 | Gene3D | Vaccinia Virus protein VP39 | 1 | 202 | IPR029063 | - | |
| Bma03g00515 | 202 | CDD | AdoMet_MTases | 43 | 141 | - | - | |
| Bma03g00515 | 202 | PANTHER | O-METHYLTRANSFERASE-RELATED | 1 | 201 | - | - | |
| Bma03g00515 | 202 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 8 | 200 | IPR029063 | - | |
| Bma03g00515 | 202 | Pfam | O-methyltransferase | 1 | 201 | IPR002935 | GO:0008171 | |
| Bma03g00515 | 202 | ProSiteProfiles | SAM-dependent O-methyltransferase class I-type profile. | 1 | 201 | IPR002935 | GO:0008171 |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Bma03g00515 | Bma12g00435 | CCT | |
| Bma03g00515 | Bma12g00435 | ECH | |
| Bma03g00515 | Bma08g00803 | BCT |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bma03g00515 | Bma-Chr3:3991540 | Bma12g00435 | Bma-Chr12:10926811 | 5.23E-112 | dispersed | |
| Bma03g00515 | Bma-Chr3:3991540 | Bma08g00803 | Bma-Chr8:45633751 | 8.30E-109 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bma03g00515 | K00588 | - | cit:102619432 | 336.65 |