Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma03g00566 ATGGCGGCCACTCCTTCCACTGATGATGCTCCACTTTCATCCGAAGGTGGCGAGAGCTACGACATGGATAAGGACCACCCCACATTTGTTTGGGGGACGAATATAAGCGTCGATGATGTTAAAGGGGCGATTATTCGTTTCTTGAAACATTTCCGGGATTCCAGAGCTTCACAATCGGAAGGAGAATTTATTACTGAAGGGAAGTATACGGAGGCAATCAAACGGGTTCTTGAGATCGAAGGAGATTCTCTGGATGTTGATGCCCGAGATGTATTTGACTATGATTCCGATTTGTATACTAAGATGGTGAGGTACCCCCTTGAAGTTCTGGCAATTTTTGATATTGTTTTGATGGAAATGGTCCCCCAAATTAACCCTCTATTTGAGAAGCACATTCAAACACGGATTTACAATCTCAAAACCTCTACTTCAATGAGAAATCTCAATCCATCCGACATTGAGAGGATGGTATCACTGAAAGGAATGATTATTCGGTGTAGTTCCATAATACCTGAGATTAGAGAAGGGATGTTTAGGTGTCTTGTCTGTGGGTACTACTCGGACCCCATTGCAATAGAGAGAGGACGAATCACTGAGCCAACTGTTTGCTTGAAAGAAGAGTGCCAAGCAAAAGATTCCATGACTCTAGTTCACAATCGATGCAGATTCGCTGACAAGCAGATTGTGAGGCTTCAGGAGACTCCTGATGAGATTCCAGACGGGGGCACACCACACACTGTGAGCTTGTTGATGCATGACAAGCTGGTGGATTCTGGAAAGCCAGGTGACAGAGTTGAGGTTACTGGGGTTTACCGGGCGATGACTGTGAGAGTTGGACCTACACAGAGAACCACATATATAGATTGTCTTCACGTAAAGAAGGCTGATAAGTCAAGAATGCAAGTGGAGGATCTTATGGAAGTAGAAAATCGATTGGGCTCGAATTTGGATGATCTCTCTTTTGATGAAGTGACTGTGGAGAAGTTGAAAGATCTATCAAAATTACCTGACATATACAATAGACTAACCAGATCGTTGGCACCAAACATTTGGGAGCTAGATGATGTTAAGAAAGGTCTCCTTTGCCAGCTTTTTGGTGGCAATGCTTTAAAGTTGCCATCTGGTGCTAGTTTCCGCGGAGATATAAACGTACTTCTGGTTGGTGATCCTGGAACTAGCAAGTCTCAGCTACTGCAATACATACACAAGCTATCTTCTCGAGGTATTTACACAAGTGGAAGGGGGAGTTCTGCTGTTGGTTTGACCGCTTATGTTACTAAAGATCCAGAAACAGGGGAAACAGTTCTGGAGAGTGGAGCATTGGTCTTGAGTGACAGAGGCATCTGCTGTATTGATGAATTTGATAAAATGTCTGATAATGCAAGGAGCATGTTACATGAGGTTATGGAACAGCAAACGGTTTCTATAGCCAAGGCAGGAATCATTGCCTCTCTTAATGCAAGGACCTCAGTGTTGGCTTGTGCAAATCCAAGTGGCTCACGTTACAATCCTCGTTTGTCTGTGATTGACAACATACACCTTCCTCCAACTTTATTGTTTGACTTGATTTACTTAATTCTTGACAAAGCTCATGAGGATACAGATAGGCGCCTTGCAAAGCATATTGTTTCATTACACTTTGAGAATCCCGAGATTTCAGAGCAAGATTTCTTGGATCTTCATACACTAACTGCATATGTGAGTTACGCTCGAAAGCATGTTCAGCCACAATTATCAGATGAGGCTGCTGAAGAATTAACTCGAGGTTATGTAGAGTTGAGGAGGAGAGGAAATTTCCAGGCAGTGGTTATAACAGCTACTCCCAGGCAGATTGAAAGTTTAGTTGAAAAGCACGACGTAGATGAGGCATTTCGACTTCTTGAAGTTGCAATGCAACAATCAGCAACAGATCACTCGACTGGAACAATTGATATGGATCTAATAACAACTGGAGTTTCAGCTAGTGAAAGAATGAAACGAGAAAGATTGGTCTCAGCAACCCGCAATATTATTATGGAGAAGATGCAGCTTGGCGGCCCCTCCATGCGATTACTGGAGTTGCTAGAGGAGCTAAAGAAGCAGAGCTCTAGTAGTGAAGTCCATCTCAATGATCTGAGGACTGCGGTGGCAACTCTGGCAAGCGAGGGATTTGTAGGAATCCAAGGTGATACCATTAAAAGGATACTCAATTCAGAGAAGAGTCCATTTCAGCGAACTTATGCTGCTCAGATTAAGAAGTGTGGAGAGATGGCGCGCAAATTGCGTTTTTTCAAGGAGCAAATGTCAAAGGCTGGATTAGTTTCAAAAGGGTTTATAACAAAAGCTGACGTCAATGTGGATGACCTAGAGGTCAAACTTGGTGAACTTGAGGCGGAATTGGCTGAAATAAATGCAAATGGCGGGAAGTTACAGCGTTCATACAGTGAACTTATAGAATACAAATTTGTTCTGCAGAAGGCTGGTGAGTTTTTCCAGCTAGCACAAAGCAGTGCCTTAGAACAGCAGAGAGAATATGAATCACGTCATGATATGTCAGCTGATGCTTCAAAGCAAATCAAGTTGGGGTTTCTTGCTGGACTTGTGCCTATGGAGAAATCTGTGGCTTTTGAGAGGATTTTGTTTCGTGCTACCCGGGGAAATGTATTTCTGAAGCAGGCTGGTGTTGAAGAACCTGTAATAGATCCTGTTTCTGGAGACAAGATTGAAGTTTCAGGAAGGCTCTCTGAACTGAAAACAACCATAGATGTTGGACTGCTGCAACGAGGAAATTTGTTGCTGACCATCGGTGATCAAATTGAGCAATGGGACATTTTGGTGAGAAAGGACAAGTCAATATACCATACATTGGACATGCTTAGCCTTGATGTGACAAAAAAGTGTTTGGTGGCTGAGGGATGGTCTCCAGTTTTTGCAACAAAACAGATCCAGGATGCATTGCAACGAGCAGCATTTGATTCGAATTCCCAAGTTGGGGCCATATTCCAGGTTCTGCGAACAAAGCTTGGTGACATCATGGAAATGACCTTTGGAGGGCGCTATGTTATTATGATGATGGCACTCTTCTCAATATATACAGGTCTAATCTATAATGAGTTCTTCTCTGTCCCATTTGAACTTTTTGGTCGCTCAGCTTATGCTTGTCGTGACCTCGACTGCAGAGACGCAACGACAATTGGATTGATAAAGGTGCGGCCCACCTACCCATTCGGTGTAGACCCTGTATGGCATGGTACTCGAAGTGAGCTGCCATTCCTCAACTCTTTGAAGATGAAAATGTCAATCCTTCTCGGGGTGGCCCAAATGAACCTTGGAATCATACTTAGCTATTTCAATGCAAAATTTTTCAGAAACGGCCTTAATATCTGGTACCAGTTTTTGCCACAGATGATATTTTTGAACTCTCTTTTTGGATACCTATCTCTCCTCATAATTTTAAAATGGTGCACTGGTTCACAAGCGGATTTGTACCATATTGTGCTTCTTTTACTGGCACTTGTAGCTGTACCATGGATGCTGCTTCCAAAACCTCTTATATTGAAGAAGCAACACCAGGAGAGGCATCACGGTGAATCTTATGAGCCATTACAGAGTGAAGACTTACTTCAATTAGAATCAAATCATAATGCTCATGGTCATGAGGAATTTGAGTTCAGTGAAGTTTTTGTGCATCAACTTATACACACAATAGAATTTGTACTTGGAGCAGTGTCAAATACTGCTTCCTACCTTCGTCTTTGGGCCCTAAGTCTTGCCCACTCAGAACTATCGAGTGTATTCTATGAGAAGGTTCTTCTTCTAGCTTGGGGGTTCAACAATGTAATCATCCTTATAGTAGGCATCATTGTCTTTGTATTTGCCACCGTTGGCGTGTTACTAGTGATGGAAACCCTCAGTGCTTTTCTTCACGCACTGCGTCTTCATTGGGTGGAATTCCAAAACAAATTTTACGAGGGAGATGGCTACAAATTCTATCCATTTTCATTTTCTTTGCTGGACGATGAAGCTGATTGA 4011 42.76 MAATPSTDDAPLSSEGGESYDMDKDHPTFVWGTNISVDDVKGAIIRFLKHFRDSRASQSEGEFITEGKYTEAIKRVLEIEGDSLDVDARDVFDYDSDLYTKMVRYPLEVLAIFDIVLMEMVPQINPLFEKHIQTRIYNLKTSTSMRNLNPSDIERMVSLKGMIIRCSSIIPEIREGMFRCLVCGYYSDPIAIERGRITEPTVCLKEECQAKDSMTLVHNRCRFADKQIVRLQETPDEIPDGGTPHTVSLLMHDKLVDSGKPGDRVEVTGVYRAMTVRVGPTQRTTYIDCLHVKKADKSRMQVEDLMEVENRLGSNLDDLSFDEVTVEKLKDLSKLPDIYNRLTRSLAPNIWELDDVKKGLLCQLFGGNALKLPSGASFRGDINVLLVGDPGTSKSQLLQYIHKLSSRGIYTSGRGSSAVGLTAYVTKDPETGETVLESGALVLSDRGICCIDEFDKMSDNARSMLHEVMEQQTVSIAKAGIIASLNARTSVLACANPSGSRYNPRLSVIDNIHLPPTLLFDLIYLILDKAHEDTDRRLAKHIVSLHFENPEISEQDFLDLHTLTAYVSYARKHVQPQLSDEAAEELTRGYVELRRRGNFQAVVITATPRQIESLVEKHDVDEAFRLLEVAMQQSATDHSTGTIDMDLITTGVSASERMKRERLVSATRNIIMEKMQLGGPSMRLLELLEELKKQSSSSEVHLNDLRTAVATLASEGFVGIQGDTIKRILNSEKSPFQRTYAAQIKKCGEMARKLRFFKEQMSKAGLVSKGFITKADVNVDDLEVKLGELEAELAEINANGGKLQRSYSELIEYKFVLQKAGEFFQLAQSSALEQQREYESRHDMSADASKQIKLGFLAGLVPMEKSVAFERILFRATRGNVFLKQAGVEEPVIDPVSGDKIEVSGRLSELKTTIDVGLLQRGNLLLTIGDQIEQWDILVRKDKSIYHTLDMLSLDVTKKCLVAEGWSPVFATKQIQDALQRAAFDSNSQVGAIFQVLRTKLGDIMEMTFGGRYVIMMMALFSIYTGLIYNEFFSVPFELFGRSAYACRDLDCRDATTIGLIKVRPTYPFGVDPVWHGTRSELPFLNSLKMKMSILLGVAQMNLGIILSYFNAKFFRNGLNIWYQFLPQMIFLNSLFGYLSLLIILKWCTGSQADLYHIVLLLLALVAVPWMLLPKPLILKKQHQERHHGESYEPLQSEDLLQLESNHNAHGHEEFEFSEVFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYEKVLLLAWGFNNVIILIVGIIVFVFATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFYPFSFSLLDDEAD 1336
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 4689080 4710676 - Bma016854.2 Bma03g00566 79239

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bma03g00566 1336 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 349 638 IPR027417 -
Bma03g00566 1336 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 1158 1335 - -
Bma03g00566 1336 Pfam MCM P-loop domain 326 546 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bma03g00566 1336 Gene3D - 323 636 IPR027417 -
Bma03g00566 1336 ProSitePatterns MCM family signature. 447 455 IPR018525 GO:0003677|GO:0005524|GO:0006260
Bma03g00566 1336 PANTHER VACUOLAR PROTON ATPASES 727 902 IPR002490 GO:0033179|GO:0046961|GO:1902600
Bma03g00566 1336 SMART mcm 141 632 IPR031327 GO:0003677|GO:0005524|GO:0032508
Bma03g00566 1336 Pfam MCM AAA-lid domain 562 615 IPR041562 -
Bma03g00566 1336 MobiDBLite consensus disorder prediction 1 23 - -
Bma03g00566 1336 ProSiteProfiles MCM family domain profile. 338 542 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bma03g00566 1336 PANTHER VACUOLAR PROTON ATPASES 902 1000 IPR002490 GO:0033179|GO:0046961|GO:1902600
Bma03g00566 1336 PANTHER VACUOLAR PROTON ATPASES 1158 1335 IPR002490 GO:0033179|GO:0046961|GO:1902600
Bma03g00566 1336 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 1000 1160 - -
Bma03g00566 1336 PRINTS Mini-chromosome maintenance (MCM) protein family signature 439 453 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bma03g00566 1336 PRINTS Mini-chromosome maintenance (MCM) protein family signature 379 394 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bma03g00566 1336 PRINTS Mini-chromosome maintenance (MCM) protein family signature 491 503 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bma03g00566 1336 PRINTS Mini-chromosome maintenance (MCM) protein family signature 467 480 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bma03g00566 1336 Pfam V-type ATPase 116kDa subunit family 1000 1152 IPR002490 GO:0033179|GO:0046961|GO:1902600
Bma03g00566 1336 Pfam V-type ATPase 116kDa subunit family 1157 1328 IPR002490 GO:0033179|GO:0046961|GO:1902600
Bma03g00566 1336 Pfam V-type ATPase 116kDa subunit family 902 1000 IPR002490 GO:0033179|GO:0046961|GO:1902600
Bma03g00566 1336 Pfam V-type ATPase 116kDa subunit family 729 902 IPR002490 GO:0033179|GO:0046961|GO:1902600
Bma03g00566 1336 Gene3D - 172 224 - -
Bma03g00566 1336 Pfam MCM OB domain 145 274 IPR033762 -
Bma03g00566 1336 Gene3D - 637 718 IPR036388 -
Bma03g00566 1336 Pfam MCM N-terminal domain 43 141 IPR027925 -
Bma03g00566 1336 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 902 1000 - -
Bma03g00566 1336 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 727 902 - -
Bma03g00566 1336 Gene3D - 145 285 IPR012340 -
Bma03g00566 1336 CDD MCM4 341 630 - -
Bma03g00566 1336 Gene3D - 34 139 - -
Bma03g00566 1336 PRINTS Mini-chromosome maintenance (MCM) protein 4 signature 167 180 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Bma03g00566 1336 PRINTS Mini-chromosome maintenance (MCM) protein 4 signature 218 230 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Bma03g00566 1336 PRINTS Mini-chromosome maintenance (MCM) protein 4 signature 354 365 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Bma03g00566 1336 PRINTS Mini-chromosome maintenance (MCM) protein 4 signature 632 641 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Bma03g00566 1336 PRINTS Mini-chromosome maintenance (MCM) protein 4 signature 500 517 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Bma03g00566 1336 SUPERFAMILY Nucleic acid-binding proteins 63 287 IPR012340 -
Bma03g00566 1336 Coils Coil 772 806 - -
Bma03g00566 1336 PANTHER VACUOLAR PROTON ATPASES 1000 1160 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma03g00566 K02212 MCM4, CDC54; DNA replication licensing factor MCM4 [EC:5.6.2.3] - csv:101211850 1228.77
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bma03g00566 Bma08g00785 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g00566 Bma-Chr3:4689080 Bma07g00127 Bma-Chr7:1993259 6.34E-62 dispersed
Bma03g01547 Bma-Chr3:51453499 Bma03g00566 Bma-Chr3:4689080 5.97E-18 transposed
Bma04g01647 Bma-Chr4:52347896 Bma03g00566 Bma-Chr3:4689080 1.52E-44 transposed
Bma07g00859 Bma-Chr7:29648638 Bma03g00566 Bma-Chr3:4689080 3.89E-99 transposed
Bma07g01373 Bma-Chr7:49350150 Bma03g00566 Bma-Chr3:4689080 8.64E-92 transposed
Bma10g01097 Bma-Chr10:32664098 Bma03g00566 Bma-Chr3:4689080 2.78E-57 transposed
Bma15g00493 Bma-Chr15:5716328 Bma03g00566 Bma-Chr3:4689080 6.55E-96 transposed
Bma03g00566 Bma-Chr3:4689080 Bma05g00148 Bma-Chr5:4434871 2.49E-98 wgd
Bma03g00566 Bma-Chr3:4689080 Bma08g00785 Bma-Chr8:45234372 1.52E-91 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g14 . . . . . Bpe12g00089 . . . . . . . . . Cpe04g00112 Cpe15g00555 . . . . . . . Cla02g00497 Cam02g0507 Cec02g0507 Cco02g0512 Clacu02g0509 Cmu02g0505 Cre02g0838 . . Cone3ag1221 Cone10ag1105 . Csa07g00020 . Cme01g01362 Blo04g00529 Blo13g00540 Bda15g01074 Bda14g00572 Bpe15g00852 . Bma03g00566 Bma08g00785 . . . . Cma19g00683 . Car19g00527 . . . . . . . . . . . . . . . . Lsi11g01128 . Chy01g00757 .
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bma14g00768 . 145 883 Core DNA Replication Machinery Family AT4G14700 65.9 6.9e-281 963.4
Bma14g00768 . 80 883 Core DNA Replication Machinery Family AT4G12620 63.2 4.5e-288 987.3
Bma05g00078 . 7 368 Core DNA Replication Machinery Family AT2G37560 64.9 1.4e-134 476.1
Bma05g00061 . 7 360 Core DNA Replication Machinery Family AT2G37560 65.8 1.8e-132 469.2
Bma11g00406 . 7 279 Core DNA Replication Machinery Family AT2G37560 54.3 4.1e-97 351.7
Bma01g00448 . 1 415 Core DNA Replication Machinery Family AT2G01120 61.1 1.2e-138 490.0
Bma01g00093 . 1 319 Core DNA Replication Machinery Family AT1G26840 59.9 1.0e-93 340.1
Bma12g00588 . 1 799 Core DNA Replication Machinery Family AT1G79150 55.6 8.0e-232 800.4
Bma07g01373 . 1 940 Core DNA Replication Machinery Family AT1G44900 76.2 0.0e+00 1368.6
Bma03g00566 BCT 4 728 Core DNA Replication Machinery Family AT2G16440 73.9 5.4e-313 1070.1
Bma01g00291 . 936 1699 Core DNA Replication Machinery Family AT2G07690 74.1 0.0e+00 1086.6
Bma07g00859 . 1 836 Core DNA Replication Machinery Family AT5G44635 70.2 0.0e+00 1139.4
Bma15g00493 CCT 18 722 Core DNA Replication Machinery Family AT4G02060 84.0 0.0e+00 1188.7
Bma11g00084 . 40 509 Core DNA Replication Machinery Family AT2G29680 57.2 5.2e-149 524.6
Bma11g00084 . 1 479 Core DNA Replication Machinery Family AT1G07270 54.6 6.1e-136 481.1
Bma12g00066 . 1 594 Core DNA Replication Machinery Family AT3G25100 77.1 8.2e-255 876.3
Bma09g00801 . 3 596 Core DNA Replication Machinery Family AT3G25100 76.8 7.7e-253 869.8
Bma15g00665 . 1 594 Core DNA Replication Machinery Family AT3G25100 76.6 2.2e-252 868.2
Bma04g01647 . 22 728 Core DNA Replication Machinery Family AT3G09660 60.8 6.2e-250 860.5
Bma10g01097 CCT 1 610 Core DNA Replication Machinery Family AT2G14050 76.2 1.2e-270 929.1
Bma03g01547 . 1 246 Core DNA Replication Machinery Family AT2G14050 74.9 3.2e-95 346.3
Bma03g01549 . 9 260 Core DNA Replication Machinery Family AT2G14050 56.9 7.4e-76 282.0
Bma05g00365 . 6 353 Core DNA Replication Machinery Family AT2G20980 54.6 5.2e-104 374.8
Bma15g00229 . 1 228 Core DNA Replication Machinery Family AT1G77320 71.9 2.9e-95 347.1
Bma13g00787 . 1 191 Core DNA Replication Machinery Family AT1G80190 69.1 7.5e-75 276.9
Bma14g00519 . 2 192 Core DNA Replication Machinery Family AT1G80190 69.1 1.7e-74 275.8
Bma14g00698 . 2 192 Core DNA Replication Machinery Family AT1G80190 68.0 1.1e-73 273.1
Bma08g00026 . 1 191 Core DNA Replication Machinery Family AT1G80190 67.5 3.1e-73 271.6
Bma05g00599 . 1 145 Core DNA Replication Machinery Family AT3G12530 71.0 4.3e-59 224.2
Bma07g00894 . 1 145 Core DNA Replication Machinery Family AT3G12530 71.0 4.3e-59 224.2
Bma08g01083 . 1 182 Core DNA Replication Machinery Family AT1G19080 65.9 6.2e-68 253.8
Bma08g01083 . 1 182 Core DNA Replication Machinery Family AT3G55490 65.9 6.2e-68 253.8
Bma02g00932 . 15 163 Core DNA Replication Machinery Family AT5G49010 64.0 1.5e-48 189.5
Bma15g00244 . 2 617 Core DNA Replication Machinery Family AT1G67630 60.1 2.4e-217 751.9
Bma05g01138 . 1 447 Core DNA Replication Machinery Family AT1G67320 65.7 7.1e-188 653.7
Bma05g00872 . 1 453 Core DNA Replication Machinery Family AT5G41880 65.3 7.8e-181 630.2
Bma09g00431 . 27 1152 Core DNA Replication Machinery Family AT5G63960 74.7 0.0e+00 1696.8
Bma10g00174 . 4 437 Core DNA Replication Machinery Family AT2G42120 76.0 1.4e-198 689.1
Bma05g01138 . 1 447 Core DNA Replication Machinery Family AT1G67320 65.7 7.1e-188 653.7
Bma11g00219 . 2 1474 Core DNA Replication Machinery Family AT1G08260 76.5 0.0e+00 2272.7
Bma11g00219 . 23 1474 Core DNA Replication Machinery Family AT2G27120 74.1 0.0e+00 2150.6
Bma12g01277 . 7 486 Core DNA Replication Machinery Family AT5G22110 70.3 1.6e-195 679.1
Bma03g00647 . 22 198 Core DNA Replication Machinery Family AT5G22110 56.8 1.2e-54 211.1
Bma07g00220 . 7 911 Core DNA Replication Machinery Family AT5G22010 63.0 1.1e-287 986.1
Bma05g00808 . 3 332 Core DNA Replication Machinery Family AT1G63160 89.7 4.6e-170 594.0
Bma01g02668 BCT 1 354 Core DNA Replication Machinery Family AT5G27740 85.0 1.4e-177 619.0
Bma01g01795 . 1 354 Core DNA Replication Machinery Family AT5G27740 85.0 2.4e-177 618.2
Bma04g00016 BCT 1 336 Core DNA Replication Machinery Family AT1G21690 81.3 1.5e-152 535.8
Bma02g00213 BCT 1 339 Core DNA Replication Machinery Family AT1G77470 71.4 6.2e-144 507.3
Bma01g00807 BCT 1 283 Core DNA Replication Machinery Family AT1G77470 57.4 1.3e-93 340.1
Bma06g00893 . 1 450 Core DNA Replication Machinery Family AT2G06510 77.2 3.3e-214 741.5
Bma12g00253 . 2 454 Core DNA Replication Machinery Family AT2G06510 65.5 1.9e-185 646.0
Bma12g00964 CCT 1 625 Core DNA Replication Machinery Family AT5G08020 66.9 2.1e-242 835.1
Bma08g00242 CCT 1 591 Core DNA Replication Machinery Family AT5G08020 62.5 1.0e-220 763.1
Bma12g00253 . 1 558 Core DNA Replication Machinery Family AT5G45400 62.8 2.4e-207 719.2
Bma06g00893 . 3 453 Core DNA Replication Machinery Family AT5G45400 63.0 6.8e-170 594.7
Bma12g00964 CCT 1 624 Core DNA Replication Machinery Family AT5G61000 64.8 6.2e-237 817.0
Bma08g00242 CCT 1 585 Core DNA Replication Machinery Family AT5G61000 61.7 9.4e-217 750.0
Bma12g00253 . 2 579 Core DNA Replication Machinery Family AT4G19130 60.7 7.9e-205 710.7
Bma06g00893 . 3 453 Core DNA Replication Machinery Family AT4G19130 60.3 2.3e-164 576.2
Bma01g00646 . 1 361 Core DNA Replication Machinery Family AT5G26680 83.9 7.4e-178 620.2
Bma02g01168 . 1 1131 Core DNA Replication Machinery Family AT1G08840 50.7 1.5e-288 989.2
Bma08g00918 . 1 295 Core DNA Replication Machinery Family AT2G25100 68.2 1.6e-115 412.5
Bma08g00503 . 1 239 Core DNA Replication Machinery Family AT2G25100 72.4 1.0e-98 356.7
Bma07g00168 . 46 802 Core DNA Replication Machinery Family AT1G08130 67.6 1.4e-286 982.2
Bma07g00168 . 209 802 Core DNA Replication Machinery Family AT1G49250 66.8 7.0e-231 797.0
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007588 1 2 1 1 1 1 3 1 1 1 1 1 2 1 1 2 1 1 2 1 1 1 1 1 1 1 1 1 1 1 36
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bma03g00566 Bma_Chr03 FPKM 27.275387 29.833502 27.545141 28.841169 44.883831 48.292191 43.982975 33.688313 37.185425 34.612133