Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma03g00577 ATGGGCAATACTGAAGAAGCTCGAACTGATATAGCGCAGAGCCTCCAATGTTCGTTGGAAACTTCTTCCTCATCGCATCTAAAGCAAGCTTTACCGATGAACCAACTAAATATTCCCCAATTTAACTCCTCACAATTCCGTTCGCGGCATTTTCCGCCAAATTATTCTGTAGATATCAAAAAAGTTGGGATACCACCTTCGCACCCTCATCAAATTCCACCCATTTCGCCCTTTTCTCAGATCCCAATTCCTCGACCGGTGAACCACCAAATCGGATCACAGAATCACACATCGGGACCCACTCATTCCCGATCATTGTCACAGCCATCGTTTTTCTCTCTCGATTCTTTACCGCCATTGAGCCCCTCACCATTTCGTGACTCCCCAACCTCATCAATTTCAGACCAGGTTTCGGCAGATGCGTCGATGGAGGATAGAGATGCAAGTACACATTCTTTGTTGCCTCCCTCGCCCCATCCAAAGGGACATTTTTTGAAAGTTGGTGATGGTATTCCTCCTCGTAAAGCTCATAGGAGGTCTAACAGTGATATTCCGTTTGGATTTTCAACGGTGATGCAGTCATCTCCTCCCTTGCTTCCATTAAAGGGTTCAGGTAGTTTAGAGAGGTCAGTGTCTGGTAAAGATAATTTTGTGATGGCAAAGCCTACCCACGTAGTCAAAAGAGAGAGTAACTGGGAAAGAGGTAGGGATGAGAATGCAGAAGGAATGGGCGAAAGGAAATCCGAAGGGGATGTCATGGAAGATCTGTTCTCAGCTTATATGAATTTGGACACTATTGATTCATTGAACTCGTCAGGAACTGATGAGAAGAACGGAATTGAGAATCGCGAAGATTTGGATAGTAGAGCTAGTGGAACAAAGACAAATGGAGGTGATAGCAGTGATAATGAAGCAGAAAGCAGCGTGAATGAAAATGGTGGAACCACTCATAGGCCTGGGTCGAGTTCGTTGACTGACAAACGGGAAGGGATCAAAAGGAGTGCTGGAGGAGATATTGCTCCAACCATCCGACACTATCGAAGCATTTCCATGGATAGTTTCATAGGCAAGTTGCAGTTTGGTGACGAGTCTTCTAAAATGCCACCATCGCCAGGTGGTCATCCGGGCCTCCTCTCGCCGAGCACCGTGGTCGATGGTAGTTCGACTCCATTTAGCTTGGAGTTTGGAAATGGCGAGTTCAGCGGGGCCGAAATGAAGAAAATTATGGCAAATGACAAGCTTGCTGAGATTGCCGTGACTGACCCAAAGCGTGTTAAGAGGATCTTGGCTAATCGACAATCAGCTGCTCGTTCAAAGGAACGGAAGATGAGGTATATTACCGAGTTGGAACACAAAGTTCAAACTCTCCAAACGGAAGCTACCACACTGTCTGCCCAGCTTACTCTTCTTCAGAGAGATTCTGTGGGGCTCACAAACCAGAACAATGAGCTCAAGTTTCGTCTTCAAGCCATGGAGCAGCAAGCACAGCTTCGAGATGCGCTAAATGAAGCTTTGACGACCGAAGTTCAGCGACTAAAACTGGCGACTACGGATATAAATGCGCAAACTTCGATCAACCTGTCAATGTTTCAGATGCAGAATCAGCACGCCCACAAACCACCCAACACATGTGAATTGTTGATTTGA 1647 46.27 MGNTEEARTDIAQSLQCSLETSSSSHLKQALPMNQLNIPQFNSSQFRSRHFPPNYSVDIKKVGIPPSHPHQIPPISPFSQIPIPRPVNHQIGSQNHTSGPTHSRSLSQPSFFSLDSLPPLSPSPFRDSPTSSISDQVSADASMEDRDASTHSLLPPSPHPKGHFLKVGDGIPPRKAHRRSNSDIPFGFSTVMQSSPPLLPLKGSGSLERSVSGKDNFVMAKPTHVVKRESNWERGRDENAEGMGERKSEGDVMEDLFSAYMNLDTIDSLNSSGTDEKNGIENREDLDSRASGTKTNGGDSSDNEAESSVNENGGTTHRPGSSSLTDKREGIKRSAGGDIAPTIRHYRSISMDSFIGKLQFGDESSKMPPSPGGHPGLLSPSTVVDGSSTPFSLEFGNGEFSGAEMKKIMANDKLAEIAVTDPKRVKRILANRQSAARSKERKMRYITELEHKVQTLQTEATTLSAQLTLLQRDSVGLTNQNNELKFRLQAMEQQAQLRDALNEALTTEVQRLKLATTDINAQTSINLSMFQMQNQHAHKPPNTCELLI 548
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 4824891 4826990 + Bma016867.1 Bma03g00577 79250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma03g00577 548 MobiDBLite consensus disorder prediction 228 251 - -
Bma03g00577 548 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 77 536 - -
Bma03g00577 548 MobiDBLite consensus disorder prediction 183 200 - -
Bma03g00577 548 PANTHER ZIPPER TRANSCRIPTION FACTOR FAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED 77 536 - -
Bma03g00577 548 Pfam bZIP transcription factor 423 477 IPR004827 GO:0003700|GO:0006355
Bma03g00577 548 SMART brlzneu 419 483 IPR004827 GO:0003700|GO:0006355
Bma03g00577 548 MobiDBLite consensus disorder prediction 61 216 - -
Bma03g00577 548 MobiDBLite consensus disorder prediction 86 117 - -
Bma03g00577 548 SUPERFAMILY Leucine zipper domain 423 474 IPR046347 GO:0003700|GO:0006355
Bma03g00577 548 Coils Coil 446 494 - -
Bma03g00577 548 MobiDBLite consensus disorder prediction 67 81 - -
Bma03g00577 548 CDD bZIP_plant_RF2 424 473 IPR044759 GO:0003700|GO:0006355
Bma03g00577 548 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 421 484 IPR004827 GO:0003700|GO:0006355
Bma03g00577 548 MobiDBLite consensus disorder prediction 291 321 - -
Bma03g00577 548 Gene3D - 422 474 - -
Bma03g00577 548 MobiDBLite consensus disorder prediction 268 338 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma03g00577 Bma08g00776 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g00577 Bma-Chr3:4824891 Bma11g00053 Bma-Chr11:633121 2.18E-52 dispersed
Bma03g00577 Bma-Chr3:4824891 Bma05g00160 Bma-Chr5:4667359 1.25E-148 wgd
Bma03g00577 Bma-Chr3:4824891 Bma08g00776 Bma-Chr8:45085860 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
57004 PF00170 bZIP_1 1.70E-08 CL0018 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma03g00577 - - jre:108986979 681.019