Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bma03g00596 | ATGGCGGCAAAAGTGTCTCCTTGGGGAAAGACCGGAGCTTGGGCTCTCGATTCTGAAGAACACGAAGCCGAACTTCTTGCAGGGCATCCATCTGACCAGAACACCCAACCGACCGCTGATTTTCCTTCTCTGGCTGCCGCCGCCGCTACCAAACCAAAGAAGAAGAAATGCCAGACCATCTCCTTGGCCGAGTTTACTACCTATGGAGGTGCCAAACCTCCTGCTGTTTCCAACCAACCTACGGGTCTCACCCATGAGGATATCCTGATTCTCCCCACCGGCCCACGCGAGCGAACTGCTGAGGAGCTGGACCGGACTCGGCTTGGTGGCGGATTCAGGAATTACGGCTCAAATGGTTCTTATGATCGGAGTAATAGACACTCCAATGGAGATGATTCGTCTAATTCGAGGTGGGGTTCGTCTAGGGTTTCTGATGAGACGAAGAGGAGCGGTGGTTTTGGAAAGGAGTATGTGAGGGATGCGGCTCCATCTAGGGCGGATGAGATTGATAACTGGGCGGCAGGCAAAAAGCCGATTGTGAGCGACGGATTTGAGAAGAGGGATAGAGGATGGTTTTCTGATACTCGGTCCTTCAAAGCAGACGATTCAGATAGTTGGGTTTCCAATAAGACCTTTGTACCTTCCGAAACTCGGAGATTCAGTAGTAATGGGAGTTTTGATAGAGAACGGAGAGGGGGGTTCGCCTCGAATGGTATTGGTGTTGATTCAGATAAGTGGGGGAAGAAGGAGGAGGGTATTAATAGAAGCACAGGTGAGAGGCCAAGGCTTAATTTGCAGCCTCGTACTGCCCCGATAAACAATGACAGGAAGCCGGAGGCGCCAGAGATTATTGCAAAGCCTAAGGGTACAAATCCTTTTGGAGAGGCAAGACCGAGGGAGGAGATTTTGGCTGAAAAGGGACAAGATTGGAAGAAGATCGACGAAAAACTTGAGTTGATGAAGAATAAGATTAAGGATAAGGAGAATGTGGAAAAGCCTGATGGAAATTCTCATGGGAAAAGAAGCTTTGGAATTGGGAATGGCAGGGTTTCTGAAGATCGGGCTGAGAGGTCCTGGAGAAAGCCTGATTCGGTGGAGACTCATCCCCAAAGGTAG | 1116 | 50.0 | MAAKVSPWGKTGAWALDSEEHEAELLAGHPSDQNTQPTADFPSLAAAAATKPKKKKCQTISLAEFTTYGGAKPPAVSNQPTGLTHEDILILPTGPRERTAEELDRTRLGGGFRNYGSNGSYDRSNRHSNGDDSSNSRWGSSRVSDETKRSGGFGKEYVRDAAPSRADEIDNWAAGKKPIVSDGFEKRDRGWFSDTRSFKADDSDSWVSNKTFVPSETRRFSSNGSFDRERRGGFASNGIGVDSDKWGKKEEGINRSTGERPRLNLQPRTAPINNDRKPEAPEIIAKPKGTNPFGEARPREEILAEKGQDWKKIDEKLELMKNKIKDKENVEKPDGNSHGKRSFGIGNGRVSEDRAERSWRKPDSVETHPQR | 371 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 4935866 | 4936981 | + | Bma016887.1 | Bma03g00596 | 79269 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bma03g00596 | 371 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 4B3 | 1 | 365 | - | - | |
| Bma03g00596 | 371 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 4B | 1 | 365 | IPR010433 | GO:0003743 | |
| Bma03g00596 | 371 | MobiDBLite | consensus disorder prediction | 217 | 298 | - | - | |
| Bma03g00596 | 371 | MobiDBLite | consensus disorder prediction | 322 | 371 | - | - | |
| Bma03g00596 | 371 | MobiDBLite | consensus disorder prediction | 68 | 161 | - | - | |
| Bma03g00596 | 371 | MobiDBLite | consensus disorder prediction | 142 | 161 | - | - | |
| Bma03g00596 | 371 | MobiDBLite | consensus disorder prediction | 19 | 41 | - | - | |
| Bma03g00596 | 371 | MobiDBLite | consensus disorder prediction | 322 | 338 | - | - | |
| Bma03g00596 | 371 | MobiDBLite | consensus disorder prediction | 350 | 371 | - | - | |
| Bma03g00596 | 371 | Pfam | Plant specific eukaryotic initiation factor 4B | 7 | 346 | IPR010433 | GO:0003743 | |
| Bma03g00596 | 371 | MobiDBLite | consensus disorder prediction | 243 | 257 | - | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Bma03g00596 | Bma08g00764 | BCT |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bma03g00596 | Bma-Chr3:4935866 | Bma14g01825 | Bma-Chr14:39176988 | 3.18E-39 | dispersed | |
| Bma03g00596 | Bma-Chr3:4935866 | Bma08g00764 | Bma-Chr8:44659284 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bma03g00596 | - | - | zju:107427556 | 455.677 |