Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma03g00608 ATGGACGACGGAGAAATTGATTATTCAAATCAAGAAGTGTTCGGTGGTTCGAACCTGGGAGAGATTCCGGGCAGTTCAATGGACAGCTTCTTTGATGAACTCCTGAAGGACACCCATACTTGCACTCATACCCATACTTGCAACCCACCAGGCCCTGACTATTCGCATACACACACCTGTTTTCACGTCCACACTAAACTTGTATCTGCCTCTAATGAAGACAAGGTTGGTTCGGATGACACTGCTGAATCTGCTGAAAAGAACACAAAGAAACGCCCATTGGGTAATAGGGAAGCTGTTCGAAAGTATCGTGAGAAGAAGAAGGCCAGGGCTGCATCCTTAGAAGATGAAGTTGTGAAATTGAGAGCTGTGAATCAACAATTGCGTAAGAGATTGCAAGGTCAGTCTGCATTAGAGGCTGAAGTTGCAAGGCTTAAGTGTTTGCTTGTGGATATTAGAGGCAGAATTGAAGGCGAGATTGGATCTTTTCCATATCAAAAGCCTGTGAATTCCAAATTGCACGATCCTAGCATTCCTAGTGCCTACGTGATGAATCCGTGTAATTTGCAGTGTGATGATCAGGTATATTGCCTTCATCCAGGGCCAGATGGTAAAATTGATGATGGTTCTACTGCAATAAATGGTCAAGGATTTGGTGCTTGTGAATTTGATAATCTTCACTGCCTGGCCAATCAGAACTCAGAGTTGACAGACACTCCTGGTTGTGGACTTGTAAATGAAGTGGCAAATGGATTTTCTTCCGGAGGAAACAAAAGAAAAGGTGAAACCTAA 792 43.56 MDDGEIDYSNQEVFGGSNLGEIPGSSMDSFFDELLKDTHTCTHTHTCNPPGPDYSHTHTCFHVHTKLVSASNEDKVGSDDTAESAEKNTKKRPLGNREAVRKYREKKKARAASLEDEVVKLRAVNQQLRKRLQGQSALEAEVARLKCLLVDIRGRIEGEIGSFPYQKPVNSKLHDPSIPSAYVMNPCNLQCDDQVYCLHPGPDGKIDDGSTAINGQGFGACEFDNLHCLANQNSELTDTPGCGLVNEVANGFSSGGNKRKGET 263
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5008389 5009180 + Bma016899.1 Bma03g00608 79281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma03g00608 263 MobiDBLite consensus disorder prediction 76 97 - -
Bma03g00608 263 PANTHER CCAAT/ENHANCER BINDING PROTEIN 1 240 - -
Bma03g00608 263 SMART brlzneu 83 151 IPR004827 GO:0003700|GO:0006355
Bma03g00608 263 MobiDBLite consensus disorder prediction 1 21 - -
Bma03g00608 263 Coils Coil 97 131 - -
Bma03g00608 263 Gene3D - 75 152 - -
Bma03g00608 263 CDD bZIP 89 143 - -
Bma03g00608 263 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 86 133 IPR004827 GO:0003700|GO:0006355
Bma03g00608 263 SUPERFAMILY Leucine zipper domain 90 134 IPR046347 GO:0003700|GO:0006355
Bma03g00608 263 MobiDBLite consensus disorder prediction 72 97 - -
Bma03g00608 263 Pfam Basic region leucine zipper 86 133 IPR004827 GO:0003700|GO:0006355
Bma03g00608 263 PANTHER BASIC LEUCINE ZIPPER 23 1 240 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g00608 Bma-Chr3:5008389 Bma08g00751 Bma-Chr8:43963890 5.27E-160 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
57008 PF07716 bZIP_2 2.00E-13 CL0018 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma03g00608 K25785 - rcu:8266428 400.208