Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma03g00613 | ATGGCTGATTGCGAGCCGTTGCTCGGCCACCAAAGAGAGATTCCGGCGACTTACGACAAGCCCCCACGTGTCGCCTCTCTCGACATCTTTCGCGGCCTCTCTGTTTTTTTGATGATACTGGTTGACTATGGTGCTTCGGTTTTTCCGATCATTGCTCATTCACCATGGAATGGTCTTCACTTGGCTGATTTTATAATGCCTAGAGTAACAAAAAGAGGAGAAGCTACATGGCAGGCCATGCTTAGGGCCACCAAACTTTTTCTTTTAGGCCTTATACTTCAAGGTGGCTACTTCCATGGAATAAACTCTTTGTCATATGGTGTTGACATTGGAAGAATAAGGTGGCTTGGAATTTTGCAGAGAATATCTATCGGATACATTGTTGCTGCTTTATGTGAGATTTGGCTTACTCGTCAAAAAAGTCGAGAACCTGGAGTTTTCAAGAGTTATTACTGGCACTGGTGTGTTGCATTCTTACTGTTGGCAATATACTTGGGTTTATTGTATGGATTGTATGTCCCTGATTGGCAATTCAAAGCTTCATTATCGACCACTTCCTCATTCTCATCAAATGATACTCATGTTTACACGGTAAAATGTTCAGCAAGAGGTGATATCGGACCTGCCTGTAATGCTGCGGCAATGATTGATCGTTATGCTTTAGGTGTTGATCATTTATACGCCAAACCTGTTTATAGAAATCTAAAGGACTGCGATATGTCCACAAGCGGTCAAGTTCCTGAACATTCGCCTTCGTGGTGCCATGCCCCATTTGACCCTGAAGGAATTTTAAGTAGCTTACCTGCAGCTGTGACCTGCTTAATTGGACTTCAATATGGTCATGTTCTTGCTCATATTCAGGACCACAAAAATCGTTTAAAAAAAATTTCCTCGTTCTCAATTGCAATTTTCGTTCTCGGACTCTTTGCTGCCTCGATAGGCATGGCTCCGAATAAATCATTATATACACTCAGTTATATGCTGATTACCTCTGCCTCTGCAGGAATAACTTTTTCTGCTGTGTATTTTTGGGTGGATGTTTTGGGTTACAGACTCATGACTTGTGTGTTCGATTGGATCGGAAAGCATGATGTGTTGGAAGAGGGACATGGCAACAAGGACTACGTCGACCCTCCTCCTGCGCCACTTATCGACATTGGCGAGCTCAAGCAATGGTCTTACTACAGAGCCCTCATCGCAGAGTTCATCGCCACCCTTCTCTTCCTCTACGTTTCTGTAGCCACTGTCATCGGCAATTTCAAGCAACTTGGCGACTGTAACGGCGTCGGACTTCTGGGTATCGCTTGGGCCTTCGGCGGCATGATCTTCATCCTCGTCTACTGCACCGCCGGTATTTCTGGTGGTCATATCAATCCGGCGGTAACTTTCGGGCTGTTTTTGGCTAGGAAAGTGTCGCTTATTCGAGCTGTGGCGTACATGGTGGCTCAATGTCTGGGAGCCATCGTCGGCGTCGGGTTGGTCAAGGCCTTCATGAAGCACGACTACAACCAAAACAACGGAGGAGTTAACGTCGTTAACGATGGCTACAGCACCGGCACAGCTCTTGGTGCGGAGATAATCGGTACTTTCGTGCTTGTTTACACTGTTTTCTCCGCCACCGACCCAAAGAGGAGCGCTCGCGACTCTCACGTCCCTGTTTTGGCTCCACTGCCTATTGGGTTCGCCGTGTTCATGGTACACTTGGCTACCATTCCGATCACCGGAACTGGCATTAACCCTGCACGGAGCTTCGGAGCTGCTGTTATCTTCAACAACAAAAAAGCCTGGGATGATTGGATCTTCTGGGTGGGGCCTTTCATCGGGGCACTGGCTGCAGCGGTTTACCACCAGTACATTCTGAGAGCGGCAGCCATTAAAGCGTTGGGATCCTTCCGCAGCAATCCTAGCAACTACTAA | 1917 | 47.16 | MADCEPLLGHQREIPATYDKPPRVASLDIFRGLSVFLMILVDYGASVFPIIAHSPWNGLHLADFIMPRVTKRGEATWQAMLRATKLFLLGLILQGGYFHGINSLSYGVDIGRIRWLGILQRISIGYIVAALCEIWLTRQKSREPGVFKSYYWHWCVAFLLLAIYLGLLYGLYVPDWQFKASLSTTSSFSSNDTHVYTVKCSARGDIGPACNAAAMIDRYALGVDHLYAKPVYRNLKDCDMSTSGQVPEHSPSWCHAPFDPEGILSSLPAAVTCLIGLQYGHVLAHIQDHKNRLKKISSFSIAIFVLGLFAASIGMAPNKSLYTLSYMLITSASAGITFSAVYFWVDVLGYRLMTCVFDWIGKHDVLEEGHGNKDYVDPPPAPLIDIGELKQWSYYRALIAEFIATLLFLYVSVATVIGNFKQLGDCNGVGLLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAIVGVGLVKAFMKHDYNQNNGGVNVVNDGYSTGTALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNNKKAWDDWIFWVGPFIGALAAAVYHQYILRAAAIKALGSFRSNPSNY | 638 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 5030967 | 5037266 | + | Bma016903.1 | Bma03g00613 | 79286 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma03g00613 | 638 | ProSitePatterns | MIP family signature. | 456 | 464 | IPR022357 | - | |
Bma03g00613 | 638 | Gene3D | Glycerol uptake facilitator protein. | 381 | 637 | IPR023271 | - | |
Bma03g00613 | 638 | TIGRFAM | MIP: MIP family channel proteins | 400 | 615 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bma03g00613 | 638 | CDD | MIP | 396 | 619 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bma03g00613 | 638 | Pfam | Major intrinsic protein | 388 | 616 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bma03g00613 | 638 | PANTHER | HEPARAN-ALPHA-GLUCOSAMINIDE N-ACETYLTRANSFERASE-LIKE ISOFORM X1 | 1 | 364 | - | - | |
Bma03g00613 | 638 | SUPERFAMILY | Aquaporin-like | 388 | 621 | IPR023271 | - | |
Bma03g00613 | 638 | PRINTS | Major intrinsic protein family signature | 396 | 415 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bma03g00613 | 638 | PRINTS | Major intrinsic protein family signature | 560 | 582 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bma03g00613 | 638 | PRINTS | Major intrinsic protein family signature | 438 | 462 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bma03g00613 | 638 | PRINTS | Major intrinsic protein family signature | 475 | 494 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bma03g00613 | 638 | PRINTS | Major intrinsic protein family signature | 599 | 619 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bma03g00613 | 638 | PRINTS | Major intrinsic protein family signature | 524 | 542 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bma03g00613 | 638 | PANTHER | LD22376P | 1 | 364 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bma03g00613 | Bma05g00373 | CCT | |
Bma03g00613 | Bma08g00749 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma03g00613 | Bma-Chr3:5030967 | Bma08g01152 | Bma-Chr8:50551770 | 9.22E-142 | dispersed | |
Bma13g00614 | Bma-Chr13:14486060 | Bma03g00613 | Bma-Chr3:5030967 | 6.52E-90 | dispersed | |
Bma05g00373 | Bma-Chr5:11918162 | Bma03g00613 | Bma-Chr3:5030967 | 1.50E-159 | transposed | |
Bma03g00613 | Bma-Chr3:5030967 | Bma08g00749 | Bma-Chr8:43945857 | 2.24E-116 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma03g00613 | - | - | pper:18767296 | 984.556 |