Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma03g00620 ATGGACGGCAACGAGACCTGCGGTAGCCGAGTGCACGACGCTTCTTCGCCGGTTCAGACTCGCCAACACAGGCAGAAGCTCCAGGTCTACAATGAGGTTCTTCGTCGTCTCAAGGACTCCGGAAATGAGGAGACCGTTAGGCCTGGTTTTGACGATGAGCTCTGGACTCACTTCAATCGCCTCCCTGCTCGGTACTTTTACCCCACAGTTTCGCTTCCGTACCGTTTCCTCACATATGTATACCGAATTCACTTCAGGTATGCTCTCGACGTGAATGTGGAGAGGGCAGAAGATGTTCTTATGCATAAAAAACTACTGCATTTGGCTCGTGATCCTGATAAGAGACCTGCAATTGAAGTCCGATTAGTCCAGGTAATGACTAAATTCATTTTGCTTATACAGGTGCAGCCTATTTCTGATGGGAATTCAGCTGAGTTTACCAACTCGAGTCCTAGTAAAGACGCCGCCCAAAGTTCTTCAAATTTCTATAGCAGACGGAGCATACACCCTCCTCCTGCCTTTGGTTCCTCTCCTAACCTCGAAGCCCTTGCACTTGACACTGATAAATCTGATGATCAGGATGAGGAGAACTCTGCACATGCTTTGACTTCATTGCTTGCTGAGATTGGGCTTAACATCCAAGAAGCACATGCATTTTCAACAATAGATGGTTACTCCTTGGATGTCTTTGTTGTTGATGGTTGGCCATATGAGGAAACAGAGCAGCTTAAAATTGCACTGGAAAAGGAAGTTTTGAAGATTGAGAGGAAGACTTGGCCAAATCATCAATCAATATCTCCAGTAGACGAGCGTGATAAATTTGTTATTAAATGCAAACCTGATCATGTCAAGATACCGAATGATGAGACTGATGTATGGGAAATAGATCCTAGATATTTAAAATTCGAGCATAAAGTTGCATCTGGATCGTTTGGTGATTTGTATAAAGGTACATATTACAACCAAGAAGTGGCTATTAAAGTCCTCAAACCCGAACGCATAGATTCTGATATGCAGAAAGATTTTGCTCAAGAAGTCTTTATTATGAGGAAAGTCAGGCACAAAAATGTTGTGCAGTTTATAGGTGCATGTACCAAGCCTCCAAGGCTTTGCATTGTGACTGAATTTATGTCTGGTGGAAGTGTATATGACTACTTACATAAACAAAAAGGCGTTTTCAAGCTTCCATCTTTACTCAAGGTGGCGATTGATGTTTCCAAAGGAATGAACTATTTGCACCAAAACAATATAATTCACAGAGATTTGAAGGCTGCCAATCTTTTGATGGATGAGAATGAATCGCAGGTTGTTAAGGTTGCTGATTTTGGAGTTGCCAGAGTAAAAGTTCAGTCAGGGGTAATGACTGCTGAAACTGGAACATACAGATGGATGGCTCCTGAGGTGATAGAGCACAAGCCCTATGATCAGAAGGCTGATGTTTTCAGTTTTGGAATTGTCTTATGGGAGTTGCTAACTGGAAAGCTTCCCTACGAATACTTGACCCCATTACAAGCTGCTGTTGGAGTGGTTCAAAAGGGTATTCGACCTACTATTCCAAAGAACACTCATCCAAAGCTAGTTGATCTAATGGAGAAGTGCTGGCAACAAGATCCAGCATCTCGACCCGATTTCCCGGAAATCATGTCAATATTGCAGCAATTAGCCAAGGAGGTAGGAGATGATGGAGACGAACGACGTAAAGAGAAATCGAACGGCGGACTTCTATCTGTTCTGATGCGGAGCCAGAGCTTCAACAAAAAAGGACACACTAACGAGTAA 1779 43.23 MDGNETCGSRVHDASSPVQTRQHRQKLQVYNEVLRRLKDSGNEETVRPGFDDELWTHFNRLPARYFYPTVSLPYRFLTYVYRIHFRYALDVNVERAEDVLMHKKLLHLARDPDKRPAIEVRLVQVMTKFILLIQVQPISDGNSAEFTNSSPSKDAAQSSSNFYSRRSIHPPPAFGSSPNLEALALDTDKSDDQDEENSAHALTSLLAEIGLNIQEAHAFSTIDGYSLDVFVVDGWPYEETEQLKIALEKEVLKIERKTWPNHQSISPVDERDKFVIKCKPDHVKIPNDETDVWEIDPRYLKFEHKVASGSFGDLYKGTYYNQEVAIKVLKPERIDSDMQKDFAQEVFIMRKVRHKNVVQFIGACTKPPRLCIVTEFMSGGSVYDYLHKQKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENESQVVKVADFGVARVKVQSGVMTAETGTYRWMAPEVIEHKPYDQKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGIRPTIPKNTHPKLVDLMEKCWQQDPASRPDFPEIMSILQQLAKEVGDDGDERRKEKSNGGLLSVLMRSQSFNKKGHTNE 592
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5114687 5120156 - Bma016911.2 Bma03g00620 79293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma03g00620 592 ProSiteProfiles Protein kinase domain profile. 300 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma03g00620 592 Gene3D Transferase(Phosphotransferase) domain 1 379 587 - -
Bma03g00620 592 PANTHER SERINE/THREONINE-PROTEIN KINASE STY46-LIKE ISOFORM X1 11 197 - -
Bma03g00620 592 ProSiteProfiles ACT domain profile. 187 259 IPR002912 -
Bma03g00620 592 MobiDBLite consensus disorder prediction 143 166 - -
Bma03g00620 592 CDD STKc_MAP3K-like 306 551 - -
Bma03g00620 592 SMART serkin_6 300 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma03g00620 592 MobiDBLite consensus disorder prediction 143 179 - -
Bma03g00620 592 ProSitePatterns Serine/Threonine protein kinases active-site signature. 417 429 IPR008271 GO:0004672|GO:0006468
Bma03g00620 592 Coils Coil 237 257 - -
Bma03g00620 592 PRINTS Tyrosine kinase catalytic domain signature 522 544 IPR001245 GO:0004672|GO:0006468
Bma03g00620 592 PRINTS Tyrosine kinase catalytic domain signature 478 500 IPR001245 GO:0004672|GO:0006468
Bma03g00620 592 PRINTS Tyrosine kinase catalytic domain signature 374 387 IPR001245 GO:0004672|GO:0006468
Bma03g00620 592 PRINTS Tyrosine kinase catalytic domain signature 411 429 IPR001245 GO:0004672|GO:0006468
Bma03g00620 592 PRINTS Tyrosine kinase catalytic domain signature 459 469 IPR001245 GO:0004672|GO:0006468
Bma03g00620 592 Pfam Protein tyrosine and serine/threonine kinase 300 551 IPR001245 GO:0004672|GO:0006468
Bma03g00620 592 MobiDBLite consensus disorder prediction 1 23 - -
Bma03g00620 592 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 11 197 - -
Bma03g00620 592 SUPERFAMILY Protein kinase-like (PK-like) 285 551 IPR011009 -
Bma03g00620 592 Gene3D Phosphorylase Kinase; domain 1 289 378 - -
Bma03g00620 592 PANTHER SERINE/THREONINE-PROTEIN KINASE STY46-LIKE ISOFORM X1 201 565 - -
Bma03g00620 592 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 201 565 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma03g00620 Bma12g00909 CCT
Bma03g00620 Bma08g00742 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g00620 Bma-Chr3:5114687 Bma06g00081 Bma-Chr6:1282980 2.74E-16 dispersed
Bma07g00631 Bma-Chr7:10046470 Bma03g00620 Bma-Chr3:5114687 1.45E-90 dispersed
Bma01g01472 Bma-Chr1:27897242 Bma03g00620 Bma-Chr3:5114687 1.45E-39 transposed
Bma02g00338 Bma-Chr2:5462517 Bma03g00620 Bma-Chr3:5114687 1.72E-45 transposed
Bma04g00070 Bma-Chr4:616589 Bma03g00620 Bma-Chr3:5114687 7.94E-23 transposed
Bma07g01578 Bma-Chr7:51109976 Bma03g00620 Bma-Chr3:5114687 5.76E-51 transposed
Bma14g00625 Bma-Chr14:6750234 Bma03g00620 Bma-Chr3:5114687 2.38E-26 transposed
Bma15g00145 Bma-Chr15:1509297 Bma03g00620 Bma-Chr3:5114687 1.02E-58 transposed
Bma14g01847 Bma-Chr14:39510068 Bma03g00620 Bma-Chr3:5114687 3.27E-43 transposed
Bma12g00909 Bma-Chr12:40538335 Bma03g00620 Bma-Chr3:5114687 0 wgd
Bma03g00620 Bma-Chr3:5114687 Bma08g00742 Bma-Chr8:43584343 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66397 PF07714 PK_Tyr_Ser-Thr 1.10E-74 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma03g00620 - - jre:108993440 849.351