Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma03g00620 | ATGGACGGCAACGAGACCTGCGGTAGCCGAGTGCACGACGCTTCTTCGCCGGTTCAGACTCGCCAACACAGGCAGAAGCTCCAGGTCTACAATGAGGTTCTTCGTCGTCTCAAGGACTCCGGAAATGAGGAGACCGTTAGGCCTGGTTTTGACGATGAGCTCTGGACTCACTTCAATCGCCTCCCTGCTCGGTACTTTTACCCCACAGTTTCGCTTCCGTACCGTTTCCTCACATATGTATACCGAATTCACTTCAGGTATGCTCTCGACGTGAATGTGGAGAGGGCAGAAGATGTTCTTATGCATAAAAAACTACTGCATTTGGCTCGTGATCCTGATAAGAGACCTGCAATTGAAGTCCGATTAGTCCAGGTAATGACTAAATTCATTTTGCTTATACAGGTGCAGCCTATTTCTGATGGGAATTCAGCTGAGTTTACCAACTCGAGTCCTAGTAAAGACGCCGCCCAAAGTTCTTCAAATTTCTATAGCAGACGGAGCATACACCCTCCTCCTGCCTTTGGTTCCTCTCCTAACCTCGAAGCCCTTGCACTTGACACTGATAAATCTGATGATCAGGATGAGGAGAACTCTGCACATGCTTTGACTTCATTGCTTGCTGAGATTGGGCTTAACATCCAAGAAGCACATGCATTTTCAACAATAGATGGTTACTCCTTGGATGTCTTTGTTGTTGATGGTTGGCCATATGAGGAAACAGAGCAGCTTAAAATTGCACTGGAAAAGGAAGTTTTGAAGATTGAGAGGAAGACTTGGCCAAATCATCAATCAATATCTCCAGTAGACGAGCGTGATAAATTTGTTATTAAATGCAAACCTGATCATGTCAAGATACCGAATGATGAGACTGATGTATGGGAAATAGATCCTAGATATTTAAAATTCGAGCATAAAGTTGCATCTGGATCGTTTGGTGATTTGTATAAAGGTACATATTACAACCAAGAAGTGGCTATTAAAGTCCTCAAACCCGAACGCATAGATTCTGATATGCAGAAAGATTTTGCTCAAGAAGTCTTTATTATGAGGAAAGTCAGGCACAAAAATGTTGTGCAGTTTATAGGTGCATGTACCAAGCCTCCAAGGCTTTGCATTGTGACTGAATTTATGTCTGGTGGAAGTGTATATGACTACTTACATAAACAAAAAGGCGTTTTCAAGCTTCCATCTTTACTCAAGGTGGCGATTGATGTTTCCAAAGGAATGAACTATTTGCACCAAAACAATATAATTCACAGAGATTTGAAGGCTGCCAATCTTTTGATGGATGAGAATGAATCGCAGGTTGTTAAGGTTGCTGATTTTGGAGTTGCCAGAGTAAAAGTTCAGTCAGGGGTAATGACTGCTGAAACTGGAACATACAGATGGATGGCTCCTGAGGTGATAGAGCACAAGCCCTATGATCAGAAGGCTGATGTTTTCAGTTTTGGAATTGTCTTATGGGAGTTGCTAACTGGAAAGCTTCCCTACGAATACTTGACCCCATTACAAGCTGCTGTTGGAGTGGTTCAAAAGGGTATTCGACCTACTATTCCAAAGAACACTCATCCAAAGCTAGTTGATCTAATGGAGAAGTGCTGGCAACAAGATCCAGCATCTCGACCCGATTTCCCGGAAATCATGTCAATATTGCAGCAATTAGCCAAGGAGGTAGGAGATGATGGAGACGAACGACGTAAAGAGAAATCGAACGGCGGACTTCTATCTGTTCTGATGCGGAGCCAGAGCTTCAACAAAAAAGGACACACTAACGAGTAA | 1779 | 43.23 | MDGNETCGSRVHDASSPVQTRQHRQKLQVYNEVLRRLKDSGNEETVRPGFDDELWTHFNRLPARYFYPTVSLPYRFLTYVYRIHFRYALDVNVERAEDVLMHKKLLHLARDPDKRPAIEVRLVQVMTKFILLIQVQPISDGNSAEFTNSSPSKDAAQSSSNFYSRRSIHPPPAFGSSPNLEALALDTDKSDDQDEENSAHALTSLLAEIGLNIQEAHAFSTIDGYSLDVFVVDGWPYEETEQLKIALEKEVLKIERKTWPNHQSISPVDERDKFVIKCKPDHVKIPNDETDVWEIDPRYLKFEHKVASGSFGDLYKGTYYNQEVAIKVLKPERIDSDMQKDFAQEVFIMRKVRHKNVVQFIGACTKPPRLCIVTEFMSGGSVYDYLHKQKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENESQVVKVADFGVARVKVQSGVMTAETGTYRWMAPEVIEHKPYDQKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGIRPTIPKNTHPKLVDLMEKCWQQDPASRPDFPEIMSILQQLAKEVGDDGDERRKEKSNGGLLSVLMRSQSFNKKGHTNE | 592 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 5114687 | 5120156 | - | Bma016911.2 | Bma03g00620 | 79293 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma03g00620 | 592 | ProSiteProfiles | Protein kinase domain profile. | 300 | 555 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma03g00620 | 592 | Gene3D | Transferase(Phosphotransferase) domain 1 | 379 | 587 | - | - | |
Bma03g00620 | 592 | PANTHER | SERINE/THREONINE-PROTEIN KINASE STY46-LIKE ISOFORM X1 | 11 | 197 | - | - | |
Bma03g00620 | 592 | ProSiteProfiles | ACT domain profile. | 187 | 259 | IPR002912 | - | |
Bma03g00620 | 592 | MobiDBLite | consensus disorder prediction | 143 | 166 | - | - | |
Bma03g00620 | 592 | CDD | STKc_MAP3K-like | 306 | 551 | - | - | |
Bma03g00620 | 592 | SMART | serkin_6 | 300 | 555 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma03g00620 | 592 | MobiDBLite | consensus disorder prediction | 143 | 179 | - | - | |
Bma03g00620 | 592 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 417 | 429 | IPR008271 | GO:0004672|GO:0006468 | |
Bma03g00620 | 592 | Coils | Coil | 237 | 257 | - | - | |
Bma03g00620 | 592 | PRINTS | Tyrosine kinase catalytic domain signature | 522 | 544 | IPR001245 | GO:0004672|GO:0006468 | |
Bma03g00620 | 592 | PRINTS | Tyrosine kinase catalytic domain signature | 478 | 500 | IPR001245 | GO:0004672|GO:0006468 | |
Bma03g00620 | 592 | PRINTS | Tyrosine kinase catalytic domain signature | 374 | 387 | IPR001245 | GO:0004672|GO:0006468 | |
Bma03g00620 | 592 | PRINTS | Tyrosine kinase catalytic domain signature | 411 | 429 | IPR001245 | GO:0004672|GO:0006468 | |
Bma03g00620 | 592 | PRINTS | Tyrosine kinase catalytic domain signature | 459 | 469 | IPR001245 | GO:0004672|GO:0006468 | |
Bma03g00620 | 592 | Pfam | Protein tyrosine and serine/threonine kinase | 300 | 551 | IPR001245 | GO:0004672|GO:0006468 | |
Bma03g00620 | 592 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
Bma03g00620 | 592 | PANTHER | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED | 11 | 197 | - | - | |
Bma03g00620 | 592 | SUPERFAMILY | Protein kinase-like (PK-like) | 285 | 551 | IPR011009 | - | |
Bma03g00620 | 592 | Gene3D | Phosphorylase Kinase; domain 1 | 289 | 378 | - | - | |
Bma03g00620 | 592 | PANTHER | SERINE/THREONINE-PROTEIN KINASE STY46-LIKE ISOFORM X1 | 201 | 565 | - | - | |
Bma03g00620 | 592 | PANTHER | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED | 201 | 565 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bma03g00620 | Bma12g00909 | CCT | |
Bma03g00620 | Bma08g00742 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma03g00620 | Bma-Chr3:5114687 | Bma06g00081 | Bma-Chr6:1282980 | 2.74E-16 | dispersed | |
Bma07g00631 | Bma-Chr7:10046470 | Bma03g00620 | Bma-Chr3:5114687 | 1.45E-90 | dispersed | |
Bma01g01472 | Bma-Chr1:27897242 | Bma03g00620 | Bma-Chr3:5114687 | 1.45E-39 | transposed | |
Bma02g00338 | Bma-Chr2:5462517 | Bma03g00620 | Bma-Chr3:5114687 | 1.72E-45 | transposed | |
Bma04g00070 | Bma-Chr4:616589 | Bma03g00620 | Bma-Chr3:5114687 | 7.94E-23 | transposed | |
Bma07g01578 | Bma-Chr7:51109976 | Bma03g00620 | Bma-Chr3:5114687 | 5.76E-51 | transposed | |
Bma14g00625 | Bma-Chr14:6750234 | Bma03g00620 | Bma-Chr3:5114687 | 2.38E-26 | transposed | |
Bma15g00145 | Bma-Chr15:1509297 | Bma03g00620 | Bma-Chr3:5114687 | 1.02E-58 | transposed | |
Bma14g01847 | Bma-Chr14:39510068 | Bma03g00620 | Bma-Chr3:5114687 | 3.27E-43 | transposed | |
Bma12g00909 | Bma-Chr12:40538335 | Bma03g00620 | Bma-Chr3:5114687 | 0 | wgd | |
Bma03g00620 | Bma-Chr3:5114687 | Bma08g00742 | Bma-Chr8:43584343 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
66397 | PF07714 | PK_Tyr_Ser-Thr | 1.10E-74 | CL0016 | Bma | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma03g00620 | - | - | jre:108993440 | 849.351 |