Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma03g00647 ATGCGGAAATTCAAAATACTTTCAGCCATTGACGATAAATCGAGGGCTGCTACTTTGATCATAGAGCAGACCATGGGAAAGCCGGAGACTATTCTCAACGGCTTCGAGAATGTAGAAGTGGTTCCATCCTTATTTGTTTTCATGGGAAATTTTTGTTCTCAACCATGTAACCTTTCCTTTAATGCCTTTGGAAACCTCAGGATGCAATTTGGAAAGCTAGGGAAAATGATTGCAGCTCATTCACGCCTTTTAGAACATAGTCGATTTGTATTTATACCAGGGCCAGATGATGCAGGTCCATCAACAGTTTTACCTAGATGTGCTTTGCTTAAGTATCTAACGGAGGAGCTCCAAATGCCATCTTTACAAGTAATCCTTGCAGGTTTTTCGAAAAGTTTTTTATTCTTCCGAGCGATTTTATTCTATACCGACGTTTGCGTGTATTCTGCAATAGTTGATCCTTTCATTCACGCCTACTGTGATTTTATACTCAAGATCCATTTCTGCCCTCTGCCTCTGACAGTACAACCAATTATCTGGAACTATGATCACGCTCTTCATCTCTATCCAACTCCTCACGCGATAGTTATAGGGGACAGAAGTAAGCAGCAAGCATTCAAGTACACAGGAATAACTTGTTTTAATCCAGGTTCATTTTCAAACGACGGTACTTCTGTGGCGTATCGTCCATGTACTCAAGAAGTTGAATTATCGGCCTTGTAA 723 40.66 MRKFKILSAIDDKSRAATLIIEQTMGKPETILNGFENVEVVPSLFVFMGNFCSQPCNLSFNAFGNLRMQFGKLGKMIAAHSRLLEHSRFVFIPGPDDAGPSTVLPRCALLKYLTEELQMPSLQVILAGFSKSFLFFRAILFYTDVCVYSAIVDPFIHAYCDFILKIHFCPLPLTVQPIIWNYDHALHLYPTPHAIVIGDRSKQQAFKYTGITCFNPGSFSNDGTSVAYRPCTQEVELSAL 240
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5322362 5325659 + Bma016940.1 Bma03g00647 79320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma03g00647 240 Pfam DNA polymerase alpha/epsilon subunit B 29 119 IPR007185 GO:0003677|GO:0006260
Bma03g00647 240 PANTHER DNA POLYMERASE EPSILON SUBUNIT B 22 121 IPR016266 GO:0003677|GO:0006261|GO:0008622
Bma03g00647 240 PANTHER DNA POLYMERASE EPSILON SUBUNIT B 166 239 IPR016266 GO:0003677|GO:0006261|GO:0008622
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g00647 Bma-Chr3:5322362 Bma12g01277 Bma-Chr12:45778919 4.58E-118 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma03g00647 K02325 - csv:101207444 314.309