Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma03g00701 ATGGCTCAGTTACCGCCAAAAGTCCCAAACATGGCGGGGAATTGGTCGGAATTTTCTCACCAGAAGATACCTACAGTGGTGGGCCGAGGCTTTCCACCAAATGCAGCCGCTCACTACCCTTCGTGGGTGGATGAATTCCTAGAATTCTCTTCATCCAGACGTGGGTCTCACCGGCGGTCGGTTAGTGATTCCATCGCATTCCTCGAAATGCCCATGCTGGACGAATGCCGTGGCTCGGCGACGAATCACGACGCTGGATTCGATAGATTTGATGACGACCAATTCATGTCCATGTTCACTGACGAAATCTCATCAGCAGTGGGACCCACCGTGTCTTCCTCGAATCCTTCCACGCCTTCCGATCATAATAGCATTGATGATGAGAAGGAAGCGTTACATAATACCGATCAGAAGCACCAGAAAAATGAATCTGACGAGGTCCAAAGCCATTGCAAGCCGGAAAACCAAGCTCCATACAGTGCAGCTGCCAACGACGCCGGCGATAGGATAACCGACCCCAAAAGGGTCAAAAGAATCTTGGCGAATAGGCAGTCTGCACAAAGATCGAGGGTCAGGAAACTGCAATACATATCGGAGTTGGAACGAAGTGTCACTTCTTTACAAGCTGAAGTTTCTGTATTATCGCCACGGGTGGCGTTTCTCGACCACCAAAGGTTGCTCCTAAACGTAGATAACAGTGCTCTCAAACAAAGGATCGCAGCTCTGGCCCAAGATAAGATTTTTAAAGATGGCAAGTCTCATCAAGAAGCACTGAAGAGAGAAATCGAAAGACTGAGGCAAGTGTATCACCAGCAGAATCTAAAGAAGATTGAAAATATCGAGCATTCACCTCCTTGTTCTGATTCGAAATCTGCAGCTGATAAAAAAGAAAACCTTCTTAACGCTTGA 909 47.63 MAQLPPKVPNMAGNWSEFSHQKIPTVVGRGFPPNAAAHYPSWVDEFLEFSSSRRGSHRRSVSDSIAFLEMPMLDECRGSATNHDAGFDRFDDDQFMSMFTDEISSAVGPTVSSSNPSTPSDHNSIDDEKEALHNTDQKHQKNESDEVQSHCKPENQAPYSAAANDAGDRITDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPRVAFLDHQRLLLNVDNSALKQRIAALAQDKIFKDGKSHQEALKREIERLRQVYHQQNLKKIENIEHSPPCSDSKSAADKKENLLNA 302
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 6223941 6225798 - Bma016992.1 Bma03g00701 79374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma03g00701 302 PANTHER BASIC LEUCINE ZIPPER 61-LIKE 1 294 - -
Bma03g00701 302 MobiDBLite consensus disorder prediction 106 121 - -
Bma03g00701 302 CDD bZIP_plant_RF2 175 225 IPR044759 GO:0003700|GO:0006355
Bma03g00701 302 Coils Coil 255 275 - -
Bma03g00701 302 SMART brlzneu 170 234 IPR004827 GO:0003700|GO:0006355
Bma03g00701 302 Pfam bZIP transcription factor 174 217 IPR004827 GO:0003700|GO:0006355
Bma03g00701 302 MobiDBLite consensus disorder prediction 106 171 - -
Bma03g00701 302 MobiDBLite consensus disorder prediction 122 150 - -
Bma03g00701 302 SUPERFAMILY Leucine zipper domain 174 228 IPR046347 GO:0003700|GO:0006355
Bma03g00701 302 PANTHER BASIC LEUCINE ZIPPER 34 1 294 - -
Bma03g00701 302 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 177 192 IPR004827 GO:0003700|GO:0006355
Bma03g00701 302 MobiDBLite consensus disorder prediction 276 302 - -
Bma03g00701 302 Gene3D - 173 245 - -
Bma03g00701 302 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 172 224 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g00701 Bma-Chr3:6223941 Bma14g00263 Bma-Chr14:3091339 3.92E-107 dispersed
Bma03g00701 Bma-Chr3:6223941 Bma08g00657 Bma-Chr8:40919178 2.21E-179 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
57014 PF00170 bZIP_1 3.10E-09 CL0018 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma03g00701 - - qsu:112040072 414.461