Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma03g00702 ATGCAAAGGAACGTCAACAGCGGTGGCACAATGGCGGCTCAACCAGCATGCGCTGCCTGCAAGCACCAGCGGAAGAAGTGCGACGACGCTTGCACACTGGCCCCATATTTTCCGGCAGACAGAACAAGAGAGTTCCAAGCCGTGCACCGAGTTTTCGGGGTGAGCAACGTGACGAAGCTGGTGAAAAACGTGAGCGAAATGGATCGAAACAAGACGGTGGATTCGTTAATCTGGGAAGCCCTGTGCAGGCAGAAGGATCCCGTTTCAGGTCCTTACGGAGAATACAGAAGAATTTACGACGAACTAAAGCTGTACAGAAGCCTAAACCAGACCCAAATGCTGAAAATAGCTGGGGTGGGGATGGGATGGAACAGTTCATACGGGATAAATAACAAACCCAACAATGGAAATGGAGGGGGAATTATGAACAGTACTAGTAATGGCATAAGCTACAGTAACAGTCATGATAATTGGAGTTCTATCATTGATTCTAGTCCTAATAGTTATCCTTCAACTTATACTCAAAGTCCAGAGATTTTACGGAGCGAAAGAGAGGCTTCGTCTGTTGTTCTTCCACTTCAACACCAATCCCAGCAGTGCCATCTCCCCATCAATGGCCTTACGTTCCAGCAATACTATCTTTCAGGTACTATCTTTACGAGTTGA 666 47.15 MQRNVNSGGTMAAQPACAACKHQRKKCDDACTLAPYFPADRTREFQAVHRVFGVSNVTKLVKNVSEMDRNKTVDSLIWEALCRQKDPVSGPYGEYRRIYDELKLYRSLNQTQMLKIAGVGMGWNSSYGINNKPNNGNGGGIMNSTSNGISYSNSHDNWSSIIDSSPNSYPSTYTQSPEILRSEREASSVVLPLQHQSQQCHLPINGLTFQQYYLSGTIFTS 221
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 6241374 6242039 - Bma016993.1 Bma03g00702 79375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma03g00702 221 PANTHER LOB DOMAIN-CONTAINING PROTEIN 2 11 216 - -
Bma03g00702 221 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 11 216 - -
Bma03g00702 221 Pfam Lateral organ boundaries (LOB) domain 16 106 IPR004883 -
Bma03g00702 221 ProSiteProfiles LOB domain profile. 15 115 IPR004883 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g00702 Bma-Chr3:6241374 Bma14g00879 Bma-Chr14:9901680 9.26E-23 dispersed
Bma03g00702 Bma-Chr3:6241374 Bma01g01587 Bma-Chr1:40187920 4.02E-23 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
57015 PF03195 LOB 3.10E-32 No_clan Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma03g00702 - - mnt:112092179 212.231