Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma03g00713 ATGGGTAGCCTTGAGTTTAATTCTGATCTCTCTTCCTCCCCTCTCGGAGGAGAATTTGAACCTTTAAACCCCGAAGAATTCAGAGCCAAAGCCCATCAAATGGTGGACTTTATCGCCAATTACTATCAAAATATCGAAAAATACCCAGTTCTCTCCCAAGTTCAACCGGGATATCTCCGTAAAACTCTTCCCGAGGCTCCGCCTTACTTACCGGACTCTTTTGAAACCATTCTCGACGATGTGTCGAAGAAAATAGTTCCCGGTATGACCCACTGGTTGAGCCCGAATTTTTTCGCGTTTTTCCCGTCGACTGTAAGTACAGCTGCTTTTCTTGGAGAAATGTTGTGCACTTGTTTCAACTCCGTTGGGTTTAACTGGCTTTCTTCTCCGGCATCCACGGAGCTGGAAATGGTGGTGATGGATTGGCTAGCATCAATGCTGAAACTTCCAAAATCTTTCATGTTTTCCGGCTCCGGAGGCGGTGTTATTCAAAATACGACGAGTGAAGCCATGTTCGTCACTCTCATTGCGGCGCGAGAGAGAACTTTAAACGCCATTGGAATAGAAAATATTCACAAGCTCGTCGTTTACAGCTCGGACCAGACCCATTCGTCCTTCGAGAAGACAGCAAAGTTGGCCGGCATTCATCCGAGAAACATAAGGTCTATCCCCACGAAGGCGGATACTTGTTTTTCTCTATCTCCGGAGAGCCTCCATGAGGCATTGCAGGCTGATGTGGCATCTGGGTTTGTCCCATTTTATCTGTGCGCAACTCTGGGCACAACTTCGTCGGCAGCCATTGATCCACTCCAGCCTCTAGCCGACGTGGCGAGTGATTACGACATGTGGGTCCATGTTGATGCCGCTTATGGTGGAAGTGCCTGCATATGTCCCGAGTTCCGGCACTACCTGAACGGAATCGAAAGATGCGACTCGCTAAGTCTCAGCCCGCACAAGTGGCTGCTCAGCTACTTGGACTGCTGCTGCTTGTGGGTGACCAACCCGAGTCTGTTGGTCAAAGCATTGTCCACTAACCCCGAGTATCTGAGAAACAAACCGAGCGAAAGGGATTCTGTTGTGGATTATAAAGATTGGCAAGTGGGCACGGGTCGACGATTCAAGTCTCTCCGAATGTGGCTCGTCCTCCAAAGCTACGGCGTCGTCAATCTCCAAACCCACATCCGATCCGACGTGCGAATGGCTAAACAATTCGAAGAGTTGGTAAAATCAGACCCGAGATTCGAAATCGTAGTGCCCGTGAGATTCTCCCTAGTGTGCTTCAGGTTGAATCCGGATCCTCGGGCCGGGATCGCCAAAACCGAGTTACTAAACAAGAAGCTGCTGGAGTGGGTCAACTCGACCGGGAGAATGTACATGAGCCACACAGTAGTCCAGTTTTGCTGCAACTTGGATCCGCTCTTGTCATACCTTGCAGTAAATTATCTCGATAGATTCCTGTCCACTCAAGGAATTCCGCAACCGAAACCATGGGTGATTAAGCTTCTTGCAGTTTCCTGCGTTTCTCTAGCTGCCAAGATGAAAATGATAGATTATTCTTTCTCTGATCTTCAGCAGAGTATTGGAGGATTAGTTTTCGACACTCAAACGATACAGAGAATGGAGTTGATCATCTTGGGAGCTTTGAAATGGCGAATGCGCTCTATAACTCCCTTCTCTTTCATCCCTTTCTTCGTTTCTTCTCTCAAACTCGAAGACCCACCATTTCTGCGAGCTCTAAAAGCCAGAGCTGCAGAAATCATAATCAGAGCTCAAACTGAGATTAAGCTTTTGGAGTTCAAGCCTTCGGTTATGGCAGCTTCTTCTCTGCTCTCTGCATCTCATGAACTTTCCCCATTACAATATCCACTCTTCAAAAAAGAAATTTCCAAATGTTTACATGTAAAAATGGAAAGCATTAATCAATGCTTCAAAGTAATTCAAGAGATGGTTATAAATGAGCACGAATCTGCTTTAGAAATGGTTCGTAGCTCAAAAAGCCCCGTCCATGTGCTCGACTACCACTGTTCAAGCTCTGAAAGTGAAACCACCGTTTTCACAACCACAACCTCCACCAGTACAAGATCAGAGAGAGAGGCCAAGAGAAGAAAGATCAGAGATCAGTGA 2124 46.89 MGSLEFNSDLSSSPLGGEFEPLNPEEFRAKAHQMVDFIANYYQNIEKYPVLSQVQPGYLRKTLPEAPPYLPDSFETILDDVSKKIVPGMTHWLSPNFFAFFPSTVSTAAFLGEMLCTCFNSVGFNWLSSPASTELEMVVMDWLASMLKLPKSFMFSGSGGGVIQNTTSEAMFVTLIAARERTLNAIGIENIHKLVVYSSDQTHSSFEKTAKLAGIHPRNIRSIPTKADTCFSLSPESLHEALQADVASGFVPFYLCATLGTTSSAAIDPLQPLADVASDYDMWVHVDAAYGGSACICPEFRHYLNGIERCDSLSLSPHKWLLSYLDCCCLWVTNPSLLVKALSTNPEYLRNKPSERDSVVDYKDWQVGTGRRFKSLRMWLVLQSYGVVNLQTHIRSDVRMAKQFEELVKSDPRFEIVVPVRFSLVCFRLNPDPRAGIAKTELLNKKLLEWVNSTGRMYMSHTVVQFCCNLDPLLSYLAVNYLDRFLSTQGIPQPKPWVIKLLAVSCVSLAAKMKMIDYSFSDLQQSIGGLVFDTQTIQRMELIILGALKWRMRSITPFSFIPFFVSSLKLEDPPFLRALKARAAEIIIRAQTEIKLLEFKPSVMAASSLLSASHELSPLQYPLFKKEISKCLHVKMESINQCFKVIQEMVINEHESALEMVRSSKSPVHVLDYHCSSSESETTVFTTTTSTSTRSEREAKRRKIRDQ 707
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 6361865 6368324 - Bma017007.1 Bma03g00713 79386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma03g00713 707 PRINTS Aromatic-L-amino-acid decarboxylase signature 411 430 IPR010977 GO:0006520|GO:0016831
Bma03g00713 707 PRINTS Aromatic-L-amino-acid decarboxylase signature 115 133 IPR010977 GO:0006520|GO:0016831
Bma03g00713 707 PRINTS Aromatic-L-amino-acid decarboxylase signature 68 87 IPR010977 GO:0006520|GO:0016831
Bma03g00713 707 PRINTS Aromatic-L-amino-acid decarboxylase signature 134 153 IPR010977 GO:0006520|GO:0016831
Bma03g00713 707 PRINTS Aromatic-L-amino-acid decarboxylase signature 94 113 IPR010977 GO:0006520|GO:0016831
Bma03g00713 707 PRINTS Aromatic-L-amino-acid decarboxylase signature 27 46 IPR010977 GO:0006520|GO:0016831
Bma03g00713 707 PRINTS Aromatic-L-amino-acid decarboxylase signature 50 67 IPR010977 GO:0006520|GO:0016831
Bma03g00713 707 PRINTS Aromatic-L-amino-acid decarboxylase signature 159 179 IPR010977 GO:0006520|GO:0016831
Bma03g00713 707 PRINTS Aromatic-L-amino-acid decarboxylase signature 368 383 IPR010977 GO:0006520|GO:0016831
Bma03g00713 707 CDD CYCLIN 464 545 IPR013763 -
Bma03g00713 707 Gene3D Aspartate Aminotransferase, domain 1 396 470 IPR015422 GO:0003824
Bma03g00713 707 SUPERFAMILY Cyclin-like 536 651 IPR036915 -
Bma03g00713 707 SUPERFAMILY Cyclin-like 464 552 IPR036915 -
Bma03g00713 707 Pfam Cyclin, C-terminal domain 555 664 IPR004367 -
Bma03g00713 707 PANTHER AROMATIC-L-AMINO-ACID DECARBOXYLASE-LIKE 1 465 - -
Bma03g00713 707 Pfam Cyclin, N-terminal domain 468 552 IPR006671 -
Bma03g00713 707 Gene3D - 104 395 IPR015421 GO:0003824
Bma03g00713 707 PANTHER GROUP II PYRIDOXAL-5-PHOSPHATE DECARBOXYLASE 1 465 - -
Bma03g00713 707 CDD DOPA_deC_like 97 464 - -
Bma03g00713 707 SUPERFAMILY PLP-dependent transferases 23 464 IPR015424 -
Bma03g00713 707 SMART Cyclin_C_2 555 682 IPR004367 -
Bma03g00713 707 SMART cyclin_7 559 648 IPR013763 -
Bma03g00713 707 SMART cyclin_7 457 546 IPR013763 -
Bma03g00713 707 Pfam Pyridoxal-dependent decarboxylase conserved domain 56 429 IPR002129 GO:0016830|GO:0019752|GO:0030170
Bma03g00713 707 MobiDBLite consensus disorder prediction 684 707 - -
Bma03g00713 707 Gene3D - 533 662 - -
Bma03g00713 707 Gene3D - 17 102 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma03g00713 Bma12g00767 CCT
Bma02g01346 Bma03g00713 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g00713 Bma-Chr3:6361865 Bma15g00719 Bma-Chr15:13306186 0 dispersed
Bma08g00604 Bma-Chr8:38088489 Bma03g00713 Bma-Chr3:6361865 0 transposed
Bma02g01346 Bma-Chr2:55928442 Bma03g00713 Bma-Chr3:6361865 2.00E-85 wgd
Bma03g00713 Bma-Chr3:6361865 Bma08g00601 Bma-Chr8:37983916 4.72E-76 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma03g00713 K01593 - zju:107416944 721.465