Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma03g00744 GTTTCTCTAATGGCGGTAGTCGTTTTTCAGGTGAAGGCGGGTTTTGGTTCATCTACCATGGAAACGGGGAAAGGCAGAGGCAAGTTGTCAAAGAATGTTACCCATGGTTATGATTTGGTGAAGGGTAAATCCAACCATGCTATGGAAGATTATTTAGTTTCAGATTTCAGGCAATTTGAGGATTATGAATTAGGTTTATTCGCCATTTTCGACGGCCATTTGGGTCATAACGTTGCAAATTACTTGCAGCACAACCTGTTTGATAATATTCTGAAAGAGCCTGATTTCCGGACGAACACCGAATCCGCAATAAAGAAAGCTTACCGGAGAACAGATGAGGAGATATTGAATCAGGACTTTCAATTAGGAAAAGGAGGTTCAACTGCTGTGACTGCAATTCTGATCAACGGCAAGAAACTGGTAGTAGCAAATGTGGGAGATTCTAGGGCGGTTTTGTCCAAGAATGGCGTAGCCAATCAGCTATCGGTAGACCACGAGCCAAGAACGGAGAGGAAGTCAATCGAAACCCGTGGTGGGTTTGTGTCAAATATTCCAGGGGATGTTCCCCGCGTCGACGGGCAGCTTGCAGTGGCGAGGGCGTTTGGTGATAAAAGCCTGAAGATTCACCTGAGTTCAGAGCCTGACATAGCGGTAGAAATGGTGGATGAAAGTACAGAGTTCCTCATCTTGGCAAGTGATGGGATTTGGAAGGTGATGTCAAACCAGGAAGCAGTGGACGCCATTAAAGACATCCAGGATGCTCAGACGGCGGCCAGGCGCTTGACTGAGCTGGCCGTTTCAAAGAGAAGCAAGGATGACATATCTGCCGTAGTTGTACGGTTTCGATAA 849 46.41 VSLMAVVVFQVKAGFGSSTMETGKGRGKLSKNVTHGYDLVKGKSNHAMEDYLVSDFRQFEDYELGLFAIFDGHLGHNVANYLQHNLFDNILKEPDFRTNTESAIKKAYRRTDEEILNQDFQLGKGGSTAVTAILINGKKLVVANVGDSRAVLSKNGVANQLSVDHEPRTERKSIETRGGFVSNIPGDVPRVDGQLAVARAFGDKSLKIHLSSEPDIAVEMVDESTEFLILASDGIWKVMSNQEAVDAIKDIQDAQTAARRLTELAVSKRSKDDISAVVVRFR 282
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 6756175 6757348 + Bma017043.1 Bma03g00744 79417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma03g00744 282 SUPERFAMILY PP2C-like 31 281 IPR036457 -
Bma03g00744 282 PANTHER PROTEIN PHOSPHATASE 2C 10 281 IPR015655 GO:0004722|GO:0006470
Bma03g00744 282 SMART PP2C_4 24 279 IPR001932 -
Bma03g00744 282 Pfam Protein phosphatase 2C 61 274 IPR001932 -
Bma03g00744 282 ProSiteProfiles PPM-type phosphatase domain profile. 34 281 IPR001932 -
Bma03g00744 282 SMART PP2C_SIG_2 43 281 IPR001932 -
Bma03g00744 282 CDD PP2Cc 35 281 IPR001932 -
Bma03g00744 282 Gene3D - 31 282 IPR036457 -
Bma03g00744 282 PANTHER PROTEIN PHOSPHATASE 2C 39-RELATED 10 281 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g00744 Bma-Chr3:6756175 Bma14g00257 Bma-Chr14:3049750 4.22E-135 dispersed
Bma05g00955 Bma-Chr5:47744658 Bma03g00744 Bma-Chr3:6756175 2.56E-37 dispersed
Bma11g00460 Bma-Chr11:5422978 Bma03g00744 Bma-Chr3:6756175 1.94E-14 dispersed
Bma03g00744 Bma-Chr3:6756175 Bma07g00627 Bma-Chr7:9974271 5.68E-110 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma03g00744 K17506 - cit:102608973 422.935