Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma03g00765 ATGCCCCAGGATTTTCCGACTGAGCAAGAACCTGAAGATTCTGATTCGGAGTTTGTTGAAATCGATCCTACTGCGCGATATGGACGATATAAGGAGGTTCTAGGAAAAGGAGCTTTCAAGAAAGTATATCGAGCTTTTGATGAATGGGAAGGGATTGAAGTAGCTTGGAATCAGGTAAAGGTGGCAGATCTATTGAGGAATTCTGATGATTTGGAGCGTTTGTATTCGGAAGTTCATCTGCTCAAGACTTTGAAGCATAAGAATATAATTAAATTTTTCAATTCATGGGTTGATACTAAACATGAAAACATCAACTTCATCACAGAGATCTTCACTTCAGGAACACTTAGACAATATAGAAAGAAACATAAGCACGTTGATTTGAGGGCTTTAAAGAAATGGTCTAGGCAGATTCTCGAGGGTCTTTTATATCTCCACAGTCATGATCCTCCCGTTATCCATCGAGATTTGAAGTGTGACAACATTTTTGTCAATGGAAACCAAGGCGAGGTGAAAATTGGTGACTTAGGACTTGCTGCCATTCTTCAGCAAGCTCGTTTAGCTCACAGTGTCATTGGTACCCCAGAGTTCATGGCACCAGAACTTTATGAAGAGGAATATGACGAGCTTGTAGACATTTATGCCTTTGGAATGTGTTTGTTAGAGTTAGTAACTTTTGAATATCCTTATGTAGAATGTGCAAATGCTGCTCAAATATACAAGAAAGTGACATCAGGGATAAAGCCAGCATCATTGGCCAAAGTAACTGATCCTGGTGTCAGGGAATTTATAGAAAAATGTATTGCAAATGTATCTGAGAGGTTGTCAGCCAAGGAACTGCTAAGGGATCCCTTTCTCCAGTCAGATGATAATGGAAGTGTATCTCGATCTTTACCTTCCAAAGTTCAGTCTGCAGGTGATAGCTCGAAAAATAATATTGCGGCTGTTGAGACAAGTAGAGACTTTACGGTGCAAGGTCAGAGGAAAGACATTCACACAATTTTTCTCAAACTGCGTATAGTGGACTCTTCAGGTAGTTTCCGCAACATCCATTTCCCGTTTGATATTGAAGCAGATACAGCCATAGCTGTTGCTAGCGAAATGGTGGATGAATTAGACCTTACAGATCAAGATGTTTCGACTATTGCTCAAATGATTCAATCTGAAGTTCAGTCCCACATTCCAGATTGGACACCCGGACTATCTCTTGATAATTCAGGAGTAGAAGCTGCAATTTCAGATAGTCATGCCTCTGAAATAAAAGACGATGCTTCTCCTTCAGTTCACGAGCCCTTTCATTCCGGAAATCTTGCTTTGGAAAGAACTCCTTCTGGTCGGAAGTATTGGTCCGACTCTCCTAAAGGAATTGGTGAAAACTCTCCCAAGCCGGGCCCTTCATCCCTGTTTCTTCATTTGGATTTAGTCGAAGAAGATAATCAAAACGATGCTATGTCAAATGCTGGTTCTACACCTGAGATTCTGAATGAAGAGGATGTTCAAGAGAACTATGAATTGTCTGTGGACAATGAATCGGAGGAAGAAAAGATAATCACTGAGACGCTTGAAAATCTGTTAGTGCAGCAGCAACAGGAGTTGGACGATTTAAAAAGGAAGCACGAAGAGTCCATATCAGAGATTTTGAAAGAACTAAACCTGGAAACCCGCAAAAGAATCATAAACAAGTTAAAGCTGGAAACCCCCGAAAATCACTGCTTGCCAGTAGATACAAGACGGGTAGCCAAAATTTTGCAAGATAAAGTTTTTTCTGATCGAAGAACCCGAAAATATGACGTGGGTGTCGAGTCTTGA 1809 40.69 MPQDFPTEQEPEDSDSEFVEIDPTARYGRYKEVLGKGAFKKVYRAFDEWEGIEVAWNQVKVADLLRNSDDLERLYSEVHLLKTLKHKNIIKFFNSWVDTKHENINFITEIFTSGTLRQYRKKHKHVDLRALKKWSRQILEGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILQQARLAHSVIGTPEFMAPELYEEEYDELVDIYAFGMCLLELVTFEYPYVECANAAQIYKKVTSGIKPASLAKVTDPGVREFIEKCIANVSERLSAKELLRDPFLQSDDNGSVSRSLPSKVQSAGDSSKNNIAAVETSRDFTVQGQRKDIHTIFLKLRIVDSSGSFRNIHFPFDIEADTAIAVASEMVDELDLTDQDVSTIAQMIQSEVQSHIPDWTPGLSLDNSGVEAAISDSHASEIKDDASPSVHEPFHSGNLALERTPSGRKYWSDSPKGIGENSPKPGPSSLFLHLDLVEEDNQNDAMSNAGSTPEILNEEDVQENYELSVDNESEEEKIITETLENLLVQQQQELDDLKRKHEESISEILKELNLETRKRIINKLKLETPENHCLPVDTRRVAKILQDKVFSDRRTRKYDVGVES 602
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 7005179 7008703 + Bma017067.1 Bma03g00765 79438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma03g00765 602 MobiDBLite consensus disorder prediction 289 310 - -
Bma03g00765 602 Gene3D Transferase(Phosphotransferase) domain 1 111 294 - -
Bma03g00765 602 MobiDBLite consensus disorder prediction 419 466 - -
Bma03g00765 602 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 8 569 - -
Bma03g00765 602 Coils Coil 518 545 - -
Bma03g00765 602 ProSitePatterns Serine/Threonine protein kinases active-site signature. 152 164 IPR008271 GO:0004672|GO:0006468
Bma03g00765 602 SMART serkin_6 28 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma03g00765 602 SUPERFAMILY Protein kinase-like (PK-like) 31 287 IPR011009 -
Bma03g00765 602 Gene3D - 332 417 - -
Bma03g00765 602 ProSiteProfiles Protein kinase domain profile. 28 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma03g00765 602 Gene3D Phosphorylase Kinase; domain 1 12 109 - -
Bma03g00765 602 Pfam Protein kinase domain 31 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma03g00765 602 CDD STKc_WNK 26 286 - -
Bma03g00765 602 PANTHER SERINE/THREONINE-PROTEIN KINASE-RELATED 8 569 - -
Bma03g00765 602 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 336 390 IPR024678 GO:0004674|GO:0005524
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g01255 Bma-Chr1:16356192 Bma03g00765 Bma-Chr3:7005179 3.16E-155 dispersed
Bma01g01257 Bma-Chr1:16565278 Bma03g00765 Bma-Chr3:7005179 3.15E-173 dispersed
Bma03g00765 Bma-Chr3:7005179 Bma06g00570 Bma-Chr6:30651802 7.76E-160 dispersed
Bma03g00765 Bma-Chr3:7005179 Bma09g00404 Bma-Chr9:34113175 1.74E-167 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66401 PF00069 Pkinase 3.80E-51 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma03g00765 K08867 - csv:101206177 748.814