Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma03g00802 ATGTCTTGCTTCTTCTCCTTCTTCTTCTCTCCTGCAAATGTTGCATCTATAAATCAATCACCCACCATTTTCAGACTTCGAGCTCTCTCTTTTCTCTGTACTGTTTTTGTTTGCCGGAGAAATATGGTGAAGGAAGACTCCCCGCAGTGTTCGGGCCAGCTTCATGTTTTGGCTGTTGACGATAGCCATGTTGATCGGAAGGTTATTGAGAGGCTGCTTAGGATCTCTTCTTGTAAAGTTACGGCAGTAGAAAGTGGTACAAGAGCTCTGCAGTTTCTGGGGTTGGACGGAGCAAAAACATCTGGGATTGATGGTTTGAAAGTGAATCTGATAATGACAGATTACTCAATGCCTGGAATGACAGGATTTGAATTGCTGAAAAGGATCAAGGAATCATCAGATTTTAGAGATGTCCCAGTCGTCGTGATGTCATCGGAGAACATCTTAGCTCATATCCACAGGTGTTTGGAGGAAGGGGCCAAGGAATTTATTGTCAAGCCGGTGAAACTATCGGACGTGAAGCGATTGAAAGATTTCCTGATAACGAAGGGAAAAGGCGAAGAAACTAGAGAGCAGAGTTCGCCAGAGAGGGAGTTTCGAGCCGACGAAATTGGGCTCTCGAATGATCCAATGCCGGCAATGCGGAATTGGGAGATGTTGTGTACTAAACTGCAGAAGAAGCCTAGATTGTGCAAGATGAATTGA 705 44.68 MSCFFSFFFSPANVASINQSPTIFRLRALSFLCTVFVCRRNMVKEDSPQCSGQLHVLAVDDSHVDRKVIERLLRISSCKVTAVESGTRALQFLGLDGAKTSGIDGLKVNLIMTDYSMPGMTGFELLKRIKESSDFRDVPVVVMSSENILAHIHRCLEEGAKEFIVKPVKLSDVKRLKDFLITKGKGEETREQSSPEREFRADEIGLSNDPMPAMRNWEMLCTKLQKKPRLCKMN 234
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 7424151 7425314 + Bma017112.1 Bma03g00802 79475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma03g00802 234 SMART REC_2 54 177 IPR001789 GO:0000160
Bma03g00802 234 Gene3D - 54 229 - -
Bma03g00802 234 PANTHER TWO-COMPONENT RESPONSE REGULATOR 50 206 IPR045279 GO:0009736
Bma03g00802 234 SUPERFAMILY CheY-like 53 181 IPR011006 -
Bma03g00802 234 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR6 50 206 - -
Bma03g00802 234 CDD REC_typeA_ARR 56 176 - -
Bma03g00802 234 ProSiteProfiles Response regulatory domain profile. 55 181 IPR001789 GO:0000160
Bma03g00802 234 Pfam Response regulator receiver domain 56 173 IPR001789 GO:0000160
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma03g00802 Bma06g00194 CCT
Bma03g00802 Bma06g00194 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g00802 Bma-Chr3:7424151 Bma14g01751 Bma-Chr14:37731854 1.11E-61 dispersed
Bma03g00802 Bma-Chr3:7424151 Bma06g00194 Bma-Chr6:2365746 1.02E-101 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
57026 PF00072 Response_reg 1.20E-21 CL0304 Bma TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma03g00802 K14492 - zju:107419317 231.106