Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma03g00810 CTGATACAGACTGAAAGCGGGAAAGAGAGAGTCGGAAAGAAAGAGGAGATGGATGAAAAGCCTGAAGTATTAGATGCTGTGTTGAAGGAAACTGTGGATTTGGAAAATATACCTATCCAGGAAGTTTTTGAGAATCTCAGATGTAGCAAAGAGGGTCTCACTACTCAGGCTGCGGAGGAAAGGCTCACCATTTTCGGACACAACAAGCTCGAGGAGAAGAAGGAGAGCAAATTCTTGAAGTTTTTGGGGTTTATGTGGAATCCTCTCTCCTGGGTTATGGAAGCTGCAGCTATTATGGCTATTGCCTTGGCTAATGGAGGAGGAAAGCCCCCTGATTGGCAAGACTTTGTGGGTATTATCACTCTGCTTCTGATCAACTCCACCATAAGTTTTATTGAGGAAAACAATGCCGGTAATGCAGCAGCAGCCCTCATGGCTCGCCTCGCCCCCAAAGCAAAGGTTCTTCGAGATGGAAGGTGGAATGAGCAGGATGCTTTTGTTTTAGTTCCTGGAGATATAGTCAGTATAAAACTTGGTGATATTATTCCTGCAGATGCTCGTCTTCTTGATGGAGATCCCTTGAAAATTGACCAGTCGGCTCTAACCGGTGAGTCCCTTCCAGTGACAAAAGGTCCTGGTGATGGGGTTTACTCGGGTTCTACTTGTAAACAAGGAGAGATTGAAGCAGTGGTCATAGCTACCGGGGTCCACACGTTCTTTGGAAAGGCTGCCCACCTTGTTGATACAACCAACCAAGTCTTGACATCAATTGGGAATTTCTGCATTTGTTCAATTGCTGTGGGGATGATTATCGAGATTATTGTAATGTACCCAATTCAGGACCGTCAGTATCGTCCTGGAATTGACAATCTCCTTGTTCTTCTCATCGGTGGAATTCCAATAGCTATGCCTACTGTCCTGTCAGTGACAATGGCCATTGGCTCCCATAGGCTATCTCAGCAGGGTGCCATCACGAAGAGGATGACTGCCATTGAAGAGATGGCTGGCATGGATGTGCTTTGCAGTGACAAGACTGGAACTTTGACGTTAAACAAACTTACCGTTGACAAAAATCTCGTCGAGGTTTTCGCCAAAGGAGTAGATGTCGACACAGTCGTGCTTATGGCAGCTAGAGCATCTCGAACCGAGAACCAAGATGCAATAGATACTGCCATTGTTGGAATGCTCGCCGATCCGAAGGAGGCACGGGCCAATATTCAGGAAATACACTTCCTTCCATTCAATCCTACTGACAAGCGAACAGCATTGACATATATTGATCGTGATGGTAAGATGCATAGAGTTAGCAAAGGTGCTCCTGAACAGATTCTGAATCTTGCACACAATAAGTCGGACATTGATCGTAGAGTTCATGCCGTGATTGACAAGTTTGCAGAACGAGGTTTACGATCGCTGGCAGTAGCATACCAGGAAGTTCCCGAGGGAAGGAAAGATAGTGCTGGAGGTCCATGGCAGTTCATTGGTCTCTTACCTCTATTCGACCCTCCACGCCATGACAGTGCAGAGACTATAAGGAGGGCCTTAAACCTTGGAGTTAATGTGAAAATGATCACTGGAGATCAACTTGCAATAGGAAAGGAAACCGGTCGCCGTTTAGGGATGGGAACAAATATGTATCCCTCGTCCGCTTTGTTAGGACAGGACAAGGATGAGTCTATTGCTGCCTTACCAATTGATGAACTGATCGAAAAAGCTGATGGGTTTGCTGGCGTTTTCCCTGAGCACAAGTACGAGATTGTGAAACGCTTACAAGCTAGAAAACACATATGCGGGATGACCGGAGATGGTGTGAACGATGCTCCTGCCCTTAAAAAGGCAGACATTGGAATAGCAGTTGCCGATGCTACCGATGCAGCCCGTAGTGCTTCCGACATTGTTCTTACCGAGCCTGGACTCAGTGTTATTATAAGTGCTGTTTTAACGAGTCGAGCAATTTTTCAGAGGATGAAGAATTATACGATTTATGCAGTGTCTATTACGATCCGTATTGTGGTAACTCTCCTTGTCTTTAGAATTTCAGTTCAACACTTAACTTTATCGCACATCTTGATTGTTTTCGTTCTTTCACAGCTTGGTTTCATGTTGCTTGCTCTTATTTGGAAATTCGACTTTCCTCCTTTTATGGTGCTTATCATTGCCATCCTTAATGATGGTACAATCATGACAATATCAAAGGATAGAGTCAAGCCATCACCCCTGCCGGATAGTTGGAAACTGGCTGAAATTTTTACGACTGGGGTTATACTCGGTAGCTACATGGCCGTGATGACTGTCATATTTTTCTGGGCAGCATATAAAACAGACTTTTTCCCAAGAACGTTTGGTGTATCAACACTTGAGAAAACAGCCCATGATGACTTCCGAAAGCTTGCCTCAGCAGTATATTTGCAAGTGAGCACGATAAGTCAAGCTCTCATATTTGTCACTCGGTCTAGAAGTTGGTCCTACGTTGAGCGTCCTGGGATTTTACTTGTTGTGGCTTTCATCATTGCCCAGCTGTGGGCACAGATTGCCACCTTAATCGCGGTCTATGCTAACTGGAGCTTTGCTGCCATTGAAGGAATTGGGTGGGGTTGGGCTGGTGTTATCTGGCTATACAACATCATTTTCTACATCCCACTTGATTTCATCAAGTTCTTTATTCGATATGCTCTGAGCGGTAAAGCTTGGGACCTCGTTATCGAGCAAAGGATTGCATTCACAAGACAGAAAGACTTCGGAAAGGAACAACGTGAGCTTCAATGGGCGCATGCACAAAGAACATTGCACGGACTGCAGCCTCCCGACACCAAGATGTTCACCGAGCGAACCCATTTCACAGAGCTTAATAACATGGCTGAGGAAGCTAAAAGAAGAGCTGAAATTGCCAGGTTACGAGAACTGCACACGCTGAAAGGTCATGTCGAATCAGTGGTGAGATTGAAGGGTCTCGACATCGAAACGATTCAGCAAGCTTACACGGTTTGA 2988 45.35 LIQTESGKERVGKKEEMDEKPEVLDAVLKETVDLENIPIQEVFENLRCSKEGLTTQAAEERLTIFGHNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLLINSTISFIEENNAGNAAAALMARLAPKAKVLRDGRWNEQDAFVLVPGDIVSIKLGDIIPADARLLDGDPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVLTSIGNFCICSIAVGMIIEIIVMYPIQDRQYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFAKGVDVDTVVLMAARASRTENQDAIDTAIVGMLADPKEARANIQEIHFLPFNPTDKRTALTYIDRDGKMHRVSKGAPEQILNLAHNKSDIDRRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSAGGPWQFIGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVVTLLVFRISVQHLTLSHILIVFVLSQLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVILGSYMAVMTVIFFWAAYKTDFFPRTFGVSTLEKTAHDDFRKLASAVYLQVSTISQALIFVTRSRSWSYVERPGILLVVAFIIAQLWAQIATLIAVYANWSFAAIEGIGWGWAGVIWLYNIIFYIPLDFIKFFIRYALSGKAWDLVIEQRIAFTRQKDFGKEQRELQWAHAQRTLHGLQPPDTKMFTERTHFTELNNMAEEAKRRAEIARLRELHTLKGHVESVVRLKGLDIETIQQAYTV 995
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 7534030 7539318 + Bma017124.1 Bma03g00810 79483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma03g00810 995 Coils Coil 946 966 - -
Bma03g00810 995 Gene3D - 338 637 IPR023214 -
Bma03g00810 995 PRINTS H+-transporting ATPase (proton pump) signature 457 475 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma03g00810 995 PRINTS H+-transporting ATPase (proton pump) signature 600 616 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma03g00810 995 PRINTS H+-transporting ATPase (proton pump) signature 802 823 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma03g00810 995 PRINTS H+-transporting ATPase (proton pump) signature 631 656 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma03g00810 995 PRINTS H+-transporting ATPase (proton pump) signature 572 588 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma03g00810 995 Gene3D - 353 500 IPR023299 GO:0000166
Bma03g00810 995 SUPERFAMILY Calcium ATPase, transduction domain A 150 247 IPR008250 -
Bma03g00810 995 Pfam E1-E2 ATPase 148 320 - -
Bma03g00810 995 Gene3D - 150 234 - -
Bma03g00810 995 SFLD p-type atpase 323 651 IPR044492 -
Bma03g00810 995 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 52 850 IPR006534 GO:0008553|GO:0016021|GO:0120029
Bma03g00810 995 Gene3D - 944 995 - -
Bma03g00810 995 ProSitePatterns E1-E2 ATPases phosphorylation site. 343 349 IPR018303 -
Bma03g00810 995 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 119 360 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma03g00810 995 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 575 679 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma03g00810 995 SUPERFAMILY Calcium ATPase, transmembrane domain M 33 892 IPR023298 -
Bma03g00810 995 CDD P-type_ATPase_H 52 886 IPR006534 GO:0008553|GO:0016021|GO:0120029
Bma03g00810 995 Gene3D - 112 860 - -
Bma03g00810 995 PANTHER CALCIUM-TRANSPORTING ATPASE 697 975 - -
Bma03g00810 995 PANTHER CALCIUM-TRANSPORTING ATPASE 19 679 - -
Bma03g00810 995 SMART Cation_ATPase_N_a_2 33 105 IPR004014 -
Bma03g00810 995 Pfam haloacid dehalogenase-like hydrolase 337 614 - -
Bma03g00810 995 Pfam Cation transporter/ATPase, N-terminus 36 99 IPR004014 -
Bma03g00810 995 SUPERFAMILY HAD-like 337 647 IPR036412 -
Bma03g00810 995 PANTHER PLASMA MEMBRANE ATPASE 1 697 975 - -
Bma03g00810 995 PANTHER PLASMA MEMBRANE ATPASE 1 19 679 - -
Bma03g00810 995 SFLD Haloacid Dehalogenase 323 651 - -
Bma03g00810 995 PRINTS P-type cation-transporting ATPase superfamily signature 495 506 - -
Bma03g00810 995 PRINTS P-type cation-transporting ATPase superfamily signature 197 211 - -
Bma03g00810 995 PRINTS P-type cation-transporting ATPase superfamily signature 341 355 - -
Bma03g00810 995 PRINTS P-type cation-transporting ATPase superfamily signature 600 619 - -
Bma03g00810 995 PRINTS P-type cation-transporting ATPase superfamily signature 517 527 - -
Bma03g00810 995 PRINTS P-type cation-transporting ATPase superfamily signature 623 635 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma03g00810 Bma06g00187 CCT
Bma03g00810 Bma06g00187 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g00810 Bma-Chr3:7534030 Bma06g01014 Bma-Chr6:46708766 0 dispersed
Bma03g00810 Bma-Chr3:7534030 Bma06g00187 Bma-Chr6:2314396 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma03g00810 K01535 - cpap:110819640 1723.37