Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma03g00818 GATCAACTTCAATTTACCAGAGCTGCAATGGATGAGATCAGAGATGAGAATCAAAGGCTAAAGATGCGCGTAGATAGAATCAAGAGGGAGTACGAGATTCTTCAAATGAAAACCTTCAGCATCATGCAAAATGAGAGGGAATGGAATGAAAAAAATAACAAGAATCGAGAAATCGAAGAATCGGAGCTTGTCGAGCTTGGTCTCAAAATGTCTCCGACGATGAATGAGATCGGAAAAAGTCCAAATAAAGCTAAATTAGAGAATGAAGACGGAATCAACGAAGAGTTGAGTCTTGGACTGAAAAACGTATTCGAAGAAGCTTCTTTAAGACCGAGCGAAAGCCGTGGAAAGATCGATGAAGAGCTTAACGAAGTCGAAGCTGCAGAGACATGGCCGCCAAGTAAACTTTTGAAGACGAAGAGACCAAACGAGGAAAGTCAAATTTCCCAAAGAAATCCTTCAAAAAAAGCAAGGGTTTCAGTGAGAGCTAGATGTGAAACACCAACGATGAACGATGGGTGTCAATGGCGGAAATATGGGCAGAAAACTGCAAAAGGGAATCCATGCCCTAGAGCTTATTACAGATGCAGTGGATCATCAACTTGTCCAGTTAGAAAACAGGTGCAAAGATGTGCAGAAGACATGAGAATTTTAACCACAACCTATGAAGGAAATCACAACCATCATCTTCCTCCTTCAGCCACTGCCATGGCTTCCACCACTTCTGCAGCTGCTTCAATGCTCTTATCTGGTTCGTCCATTTCTCAATCTGGATCGGGCATGTCTTCCTCTTCCAATCTTCATGGATTAAACTTTCACCTCCCAAATACTTCAAACCCTACACAATCCTACTTCCCTAACATCCCCTCTTTCTCATCTCCTTCTTCTTCCTCTTATCACCCAACAATCACCATAGACCTCACTTCTTCCGACCCTTTAGGTTTTTCTAAGACATACTCTTCCGATAGCTTCAACTCTGGATCTTGGAGTAATGGAGTTTGCAGCAACAATTACCAAACAGGAACCCTAGATTGTCGGGCCATTTTACAAAAGAACTACTCCGCCACTGAGGCAACTCCTTCTCGACAAGCTTCACCGGACGCAATAGCTGCAGCGACGCAGGCAATTACTGCAGACCCTAGTTTCCAGTCTGCATTAAAAGCTGCAATCTCGTTCATTATCAACTCTGATAACAGTCATGGCGTTGCACAGAAATCGAAGTGGCAAGAGGAGCCATTTTTTCCAGTGTCTAAGCCAGAAGAAAGTGGATTCTCCTCAAATCTTTTGAGCAAAGCACCATTGCTATTTGGTCCTGGTGAAAAATCCCGACCTTCTGCAATGGGGAAGTCACCAGCAAAATGGATCAAAACGATTCTGTTCGGAAAGAAGTCTTCCAAATCTCATGCTTCCAAAGGCAGAGAGAAATATACAAATGAGAAACAAGTGCTGGTTTCTGCCAAGGACTCGGAAGTTGATCTAGTTGGGGATGCTCCTGCGCTTTCACATTTAGCCATTGCTAAAAGTGAAAGGAAGGTTGGAATAAAGAACAACGAAGCTGCGAGTTTATCACATGAGAAATCCACTCGAAATCAAGATACAGAAATTCAAGGGTCAACATGTCAAGATGCACTTAATGATCATGACAGAATCAGCCGCGAGAAAGCAGCAACAAAAGCGCAGGCTGCTTTTAGGGGTTATCTGGCTCGTAGGGCATTCCGCGCTCTCAAAGGTATTATAAGGTTGCAGGCGCTTATTCGAGGACACTTGGTTAGAAGACAAGCTGTTGCTACGCTGAATTGCTTGCTGAGAATTGTGAAATTTCAAGCAGTTATTCGGGGGAGGATTGTGAGACATTCTGACGAATTGCAAGGAAAATGCATAGTTGTTAAGCCTATGAACGAACAACCATTAGTTGATCCTGCAGAAGTTACCCTTTCAGCTCGCATGGCAAAGTTTTCAGCAAATATTTTTATTTTCAAGCTGGTTGCTTCATCTCCTACTGCAAAGCCTCTTCAGCTTCATTATGATTCTGAGGATCAGAACTCTGTCTCTAGTTGGTTAGAACGCTGGTCTAAGACCCAATTCTGGAAACCACTTCCTCGGCCAAAAAAGATCACAGAACCCAAATCCCAGAAAAAGCAGATCAATGGTCAAATTTCAGAAGCACAATCTGTCAGATCGAAGCGCACAAGGAGACTTCCTGGGGCTAACAATGACAGTGCCTCTGTGCAAACGTCCTCTGAAATTGAGAAGCCCAAACGTAATCTAAGGAAAGTTTCATCCCATGCAGTAGATCAGGTGCAAGATAATCCCCAAAGTGAGCTTGAAAAAGTTAAGCGTAGCTTAAGGAAGGTTCATAATACTGTAACAGATAACTCTGTACAAATAGAAGCTGAAACTGAAAAGCAAAAGGAGACTTTGGAAAAGAATTCCATTGCTTCAGGTCGTGAGCTTTTCGAATGCAGTGTAAATAGTTCTAATGAAAGGATGAAAAAAGAGACACCGGTGATATCCAATGAGTCTAATGAAGAAATAGAGTCTGTGGCATTGGTGATGAAAGAGATTCCTGACAGAACATGTACTGATCAAGTTGTAGCAGATTTAAATCCTTCGACGGAGATCGATGTTAAAGATCAAATCACTCTTGAGGATGCTGTGAATTCAAAGGTTTTAACGGCAAACTGTATTAACGATGGGAATATTGCAGTCGTGAATGGGGAGTCTAACCACAAGGAAGAAGATTTGATGAATAGCGAGAATCAGAAATCCAGCAAGAAAGTCTCAACTCCGGCAAAGCTAGCAGAAAATGGGTTGCAAAATAGTCCTACTACACCAAGTTATATGGCGGCAACTGAATCTGCAAAGGCAAAGCTGAGAGCACAAGGATCACCCAGGTTTGGACACGAGACAGAAAAGAATAATATCGTTCGACGTCACTCCCTTCCATCTTCAACAAATGGAAAAATCAGCTCTCAATCTCCAAGAACGCAGAGGCTGGTTCAAGCCAGTGGCAAAAGTGGACATAAAAGTGACAAGTCTCTTCTGGCTTCAAGAGACGGAAATGGTATGAAATTTTGGGTCTTTTATCCCCTGATTACAGTAACGATAGATCTTTATATAAATATACATTAA 3132 42.37 DQLQFTRAAMDEIRDENQRLKMRVDRIKREYEILQMKTFSIMQNEREWNEKNNKNREIEESELVELGLKMSPTMNEIGKSPNKAKLENEDGINEELSLGLKNVFEEASLRPSESRGKIDEELNEVEAAETWPPSKLLKTKRPNEESQISQRNPSKKARVSVRARCETPTMNDGCQWRKYGQKTAKGNPCPRAYYRCSGSSTCPVRKQVQRCAEDMRILTTTYEGNHNHHLPPSATAMASTTSAAASMLLSGSSISQSGSGMSSSSNLHGLNFHLPNTSNPTQSYFPNIPSFSSPSSSSYHPTITIDLTSSDPLGFSKTYSSDSFNSGSWSNGVCSNNYQTGTLDCRAILQKNYSATEATPSRQASPDAIAAATQAITADPSFQSALKAAISFIINSDNSHGVAQKSKWQEEPFFPVSKPEESGFSSNLLSKAPLLFGPGEKSRPSAMGKSPAKWIKTILFGKKSSKSHASKGREKYTNEKQVLVSAKDSEVDLVGDAPALSHLAIAKSERKVGIKNNEAASLSHEKSTRNQDTEIQGSTCQDALNDHDRISREKAATKAQAAFRGYLARRAFRALKGIIRLQALIRGHLVRRQAVATLNCLLRIVKFQAVIRGRIVRHSDELQGKCIVVKPMNEQPLVDPAEVTLSARMAKFSANIFIFKLVASSPTAKPLQLHYDSEDQNSVSSWLERWSKTQFWKPLPRPKKITEPKSQKKQINGQISEAQSVRSKRTRRLPGANNDSASVQTSSEIEKPKRNLRKVSSHAVDQVQDNPQSELEKVKRSLRKVHNTVTDNSVQIEAETEKQKETLEKNSIASGRELFECSVNSSNERMKKETPVISNESNEEIESVALVMKEIPDRTCTDQVVADLNPSTEIDVKDQITLEDAVNSKVLTANCINDGNIAVVNGESNHKEEDLMNSENQKSSKKVSTPAKLAENGLQNSPTTPSYMAATESAKAKLRAQGSPRFGHETEKNNIVRRHSLPSSTNGKISSQSPRTQRLVQASGKSGHKSDKSLLASRDGNGMKFWVFYPLITVTIDLYINIH 1043
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 7586366 7593688 + Bma017132.1 Bma03g00818 79491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma03g00818 1043 MobiDBLite consensus disorder prediction 960 1015 - -
Bma03g00818 1043 PANTHER PROTEIN IQ-DOMAIN 31 447 1018 - -
Bma03g00818 1043 MobiDBLite consensus disorder prediction 711 749 - -
Bma03g00818 1043 Coils Coil 3 37 - -
Bma03g00818 1043 MobiDBLite consensus disorder prediction 977 1010 - -
Bma03g00818 1043 ProSiteProfiles IQ motif profile. 576 603 IPR000048 GO:0005515
Bma03g00818 1043 MobiDBLite consensus disorder prediction 962 976 - -
Bma03g00818 1043 ProSiteProfiles WRKY domain profile. 165 231 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bma03g00818 1043 SMART iq_5 574 595 IPR000048 GO:0005515
Bma03g00818 1043 SMART iq_5 551 573 IPR000048 GO:0005515
Bma03g00818 1043 MobiDBLite consensus disorder prediction 907 945 - -
Bma03g00818 1043 Pfam Protein of unknown function (DUF4005) 926 1010 IPR025064 -
Bma03g00818 1043 ProSiteProfiles IQ motif profile. 552 580 IPR000048 GO:0005515
Bma03g00818 1043 SMART WRKY_cls 170 230 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bma03g00818 1043 MobiDBLite consensus disorder prediction 699 781 - -
Bma03g00818 1043 MobiDBLite consensus disorder prediction 517 536 - -
Bma03g00818 1043 Gene3D - 551 600 - -
Bma03g00818 1043 Pfam WRKY DNA -binding domain 171 228 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bma03g00818 1043 Pfam IQ calmodulin-binding motif 576 593 IPR000048 GO:0005515
Bma03g00818 1043 Pfam IQ calmodulin-binding motif 553 573 IPR000048 GO:0005515
Bma03g00818 1043 SUPERFAMILY WRKY DNA-binding domain 163 231 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bma03g00818 1043 Gene3D WRKY domain 154 232 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bma03g00818 1043 PANTHER IQ-DOMAIN 5-RELATED 447 1018 - -
Bma03g00818 1043 MobiDBLite consensus disorder prediction 921 945 - -
Bma03g00818 1043 MobiDBLite consensus disorder prediction 129 160 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma03g00818 Bma08g00644 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g00818 Bma-Chr3:7586366 Bma10g00563 Bma-Chr10:7043915 5.15E-47 dispersed
Bma04g00236 Bma-Chr4:2044203 Bma03g00818 Bma-Chr3:7586366 1.12E-19 dispersed
Bma03g00818 Bma-Chr3:7586366 Bma08g00644 Bma-Chr8:40567513 1.30E-58 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
57028 PF13178 DUF4005 3.80E-19 No_clan Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma03g00818 - - csv:101214198 615.92