Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma03g00839 ATGGGGTGTGTGAGCTCGAAGCAGGCGGTTTTGGTGACGCCTGCGTTAGATCATTCTGGTCTATTTAGGGACAATGCGTCGTCGGGACTTGGCCACTCGGGTCGGAGCCGTTCGGAACTGGAGAAGGAAGGGAAGTCGAGGGTGAAGACGAAGACCAAAGCTACGGCGGGGTTGCGTGAGCTAGGCAGCGAGTTAGGCGAGTCGGGAAGAACTAGTTCGAATGGCGGAGGTGGGGAGTCTTTGAGCTTTCGACTGAGAAATTTGCACAAATACCTGGAGGCTGAGCAAGTAGCAGCGGGCTGGCCATCCTGGCTTAGCGCCGTCGCCGGAGACGCCATTCACGGTTGGGTGCCTCTCCGTGGGGATGCTTTTGAGAAGTTGGAAAAGATTGGACAAGGGACCTATAGTAATGTATTTCGAGCTCGTGAGCTTGAAACAGGGAGGATAGTTGCTCTGAAGAAGGTTCGATTTGATAATTTTGAGCCAGAAAGTGTAAGGTTTATGGCACGGGAAATAATGATCCTCCGCAGGCTTGATCACCCCAACATTGTAAAATTGGACGGCTTGATTACATCAAGATTATCGTGTAGTATATACCTCGTCTTTGAGTACATGGACCATGACATTACTGGCCTTCTTTCTTGTCCCGATGTCAAGTTCAGCGAATCACAAATCAAATGCTACGTGAAACAGTTGTTATCCGGACTCGAGTATTGTCACTCTCGGGGTGTAATGCATAGAGATATCAAGGGATCTAATCTTCTGGTGAACAATGAAGGAGTTTTAAAAGTGGCTGATTTTGGATTGGCAAATTTTCTTGTTTCTGGCCATCGACATCCCTTAACTAGTCGTGTTGTTACTTTGTGGTATCGTCCTCCAGAGCTTCTGCTCGGGTCGACAGATTATGGAGCGGCTGTAGATGTTTGGAGTGTTGGCTGTGTTTTTGCTGAACTGCTTGTTGGAAAGCCAATTCTTCAAGGGAGAACAGAGGTGGAACAACTGCATAAAATATTCAAGCTTTGCGGGTCTCCTCACGAAGAATATTGGAGAAAATCTAAACTTCCGCACTCGACTCTGTTCAAACCTCAACAACCGTATGAAAGTTGTTTAAGGGCGACCTTTAAAGAATTTCCCTCCACAACTGTGAACCTTCTAGAAACTCTCCTTTCCGTCGAACCATATAAACGCGGGACTGCCTCTTTTGCTCTTGCATCAGAGTATTTTGCTACGAAGCCTTACGAGTTGGCAGTATCCGCACAAGAGTCTAATAAAATCAGTGTTATAAATTCGCAAAATCTTAAAGATGAAAAAATCATCAAAGTGGGAGAGGGACCAAAGTCCTCAATTAGTAAAATTCATGCAAAGAATGCTTCTCAAGAAGACATTCCCTTTTCGGGTCCGTTACAAGTTTTGGCTTCAAGTGGCTTTGCGTGGGCCAAAATGCGAAAAGAAAACTCTTCCATGAGATCCCTCGATCGATCTAATTCAAGAGGACACAATATAAACTCCTTGAATTTTTCTTCTTTTTCATTCGGAAGAAATAACAGTGATTCAAACAGGCATGAAGGAGATCTTTGTAAAGATTCTAGATGTCTTGATTCAAGGGAAATCAGCAAAATTGCTATCTGGAACCAGTGGGGTAAGGATGAGCGACCTGATTCTTTTGACAGGTCCGAACAATATCACTCGCAGGAACTATCGCTGGCTCTTTATCTACAAGATGAGATGGAAGCTAAGAGAAGTACTCTGGCTTGTCAGGATGAAGAAGAAAATGTTGAATTTTCTGGACCTTTAATATCTCAGTCACATAGGATGGATGAGCTCTTAGATAGACATGAGCGGCACATCCGGCGGATTGTCCGAAAATCATGGTTTCAAAAAGGTATTATAATGCCGCTGTTCAGAAGGCTTTTCTACAGGAAACCGCCAGATCGGCTCCTAGAGATATCTGAGAGAGTTTATGTGTTTGATTGTTGCTTCTCTACGGATATGTTGGAAGAAGATCAGTACAAAGTATACTTGGGTGGGATTGTACCACAGCTGCAGGACTACTTTCCTGATGCTTCTTTCATGGTGTTTAACTTCAGAGAAGGGGATAGGCGGAGCCAAATTTTTGATATATTGTCTCAGTATGATATGACAGTGATGGATTACCCTCGCCAATTTGAGGGTTGTCCTCTACTGCCATTAGAGATGATCCACCACTTTCTTAGATCTAGTGAAAGCTGGTTGTCTTTAGAGGGGCAGCAAAACGTATTATTGATGCATTGTGAGAGGGGAGGGTGGCCTGTCCTTGCATTCATGCTTGCAGCATTGCTTTTGTACCGTAAACAATACAATGGGGAGCTTAAGACTCTTGACATGGTTTACAAGCAAGCACCCAGGGAACTTATTCATCTTTTATCTCCTCTAAATCCTCAGCCTTCCCAGCTGAGATATCTTCAGTACATATCTAGGAGAAATTTAGGATCTGATTGGCCCCCAACTGATATGCCACTTTTGTTGGATAGTCTGATTCTTAGAATCATCCCTCTGTTTGATGGGGAAAAAGGGTGTAGACCTGTTATTCGCATTTATGGCCAGGACCCACTGACACCAGCCAATAGAAGTACGAAGCTTCTGTATTCAACTTCGAAGACCAAAAAGCATGTCCGCCACTACTTAAAGGCAGAGTGTATGCGGGTGGACATTGGTATTCACTCTTGTGTCCAAGGAGATGTTGTTCTTGAGTGTATTCATTTGGATGAAGATCTTGTGCGTGAGCAGATGATGTTCAGAGTCATGTTTCACACAGCATTTGTTAGGTCAAACAAATTGGTGTTCCACCGTGATGAAATAGACATTTTGTGGGATACCAAGGATCAGTTCCCTAGGGACTTCAGAGTAGAGGTTCTTTTTTTGGAAGCTGATGATCCTGTGCCTAATCTCAGTCGAGTTGTGGCACATGTTGATGCAAATGAATTAGAAAGTGCTTCACCCGAGGAGTTTTTTGAAGTTGAAGAAATTTTTAGTGCGGTAGTAGATGCACCGGTAGTAAAGGGGGACTATGATAACCAAATGTTCCATGAGCATCCAAGAAATAGTTTGGATCAGAAAGAAGTTTGGAAGAACGAATTAGATCCTTCTACTTTTCAAGACTGTACATCTGATGAGGGGAATGGTAAACAAGAGCTAAAGATGGACTATAATAGTGATTCAGTGAAGGACATTGCTTTGGATGACGTCCAGTATAAAATAATTGAGGAAGTGGATTCTGATAATTCAGTGAAGGATATTGCCATTGATGATGGGGATATTAAGCCAAACTTTTCATTACTTGAGGTGGAGGGGCTGAAAGATGTTATCAAGGAATTGGTAGATGATGGTTTCGAAAAACTGGAGGAAACAGAAATAACAGTCGATGAAGAAATTATAACCCTGAGACAAGAATCCAAGGTCTCACAGAAAAAGTTGAGTGCTGATGGCTCCAGAATGAAATCTGAAAAATCACAATCACTTGCATCAAGGAAGCATCCTACATCTGCCAAACCAACCAATGAAACTGCTTTAGCCAAGCAAAAGATTAAACAACAGGAAACTCAGGGATTTCTCGCAAAACAAGCAAAGCCGAATGTATTATCTCGGTGGATACCTCCAAACAAAGGATCTTATGCAAACTCTATGCATGTATACTACCCACCATCTAGATATATTAGTGCGCCAGCTGCTCTCGCTAACTCTGCTGCTGCTTCTTCCACAGACAAAGTGGACCGTGTGAGAGCTTCAAACTCTGCACCCGAGGCACTCACATGTATCTCTGAGTTATCTCAACCAAGTAAAGGAGATTCTTCTTCTCTTCCTAGTTCAAAAGAAATATATTCTGAAACAAAAATAGAAGTGGCCCCTTCCCATCCTCCACCTCCACCCCCTCCGCCAACCTCTTCTTATTCGAGCAGTTCTTTATTACATGACCTTTCTTCCAAGTCTTTTATTCAACCTTCCCCTTATTTCCAGGTAGATATAACAGCACCCTCACCCCCACCCTCACCCTCACCCTCACCCCCACCACTTCCATTTTTAAGTAATGTAGCATCAAATAGTGATACTCTATCGTCACCTCCAATACCTTTCATAGCTCCATCCCCATCTCCACCTCCTCCACCACCTTCTCCATTGCAAGGAAGAGCACCACCTCCTCCTCCACCTTCTCCATTTCGAGGAGCGCCACCTCCTCCAATGCGTGGAGCACCTCATCCACCACCTCCTCCAATGCGTGGAGCACCTCATCCACCACCTCCGTCAATGCAAGGAGCACCACCTCCACCGCCACCTCCAATGCAGGGAGCGACTCACACACTGCCTAGTGGTGGTCCACCTCCCCCGCCTCCACTGGCGGCTCGTTTTCCTAGTCTACCTGCTCCTCCTAGACCTCCGGGTGATGGGCCTCCTCTGCCGCCACCTCTAGGTGCCAAAGGAGCAAATGTTGCTCTTGATGCAAGAGGTCTTGCTGTAGGGAGACGTCCTTCAAGCATGAATGGCACATCACATAGACGATCATCTTTGAAGCCTCTACATTGGAGCAAAGTAACGAGAGCCTTGCAAGGGAGCTTATGGGATGAAATTCAAAGATATGGAGAGCCTCAAATTGCTCCTGAGTTTGATGTATCTGAGTTAGAGACCCTTTTTTCTGCAACTGTCCCAAAAGCTGCTGATTCAGGAGGTAAATCGGGAGGGCGACGAAAGTCAGTTGGATCAAAAACTGACAAAGTGCATTTGGTTAAACCCAAAATTTCAATTCTCTTACAATTGTTTTGCAATTATCATGTTTCCCAGGCTGCAGTATTGGCAATGGATGAGACAGTGTTAGATGTTGACCAGGTGGAAAATCTCATTAAGTTTTGTCCCACAAACGAAGAGATGGAACTTCTCAAGGGATATACAGGGGATAAAGATAGTCTTGGAAAGTGTGAACAGTATTTTATGGAGCTGATGAAAGTACCTCGGGTGGAATCAAAGCTACGAGTATTTTCATTCAAAATTCAGTTTCGCTCTCAGATTTCAGAATTCAGAAAGAGTTTAAACACCATAAACTCTTCTTGTGAAGAGGTTTGTTCGGAACTCTGTCAAACTAAAGGAGATTTGAAGAAAATCCTTTATTTGGGAAACACATTAAACCAAGGAACTGCAAGGGGTTCTGCAATTGGCTTCAAGTTGGATAGTCTTTTGAAGCTCACTGATACCCGCGCCTCTAATAGTAAAATGACGCTTATGCATTATCTCTGCAAGGTCCTCGCTTCTAGGTCACCAGCACTGCTTGATTGTCATCTAGACGTGGGTAGCCTAGAAGCTGCATCTAAGATTCAATTGAAATCTTTAGCAGAAGAAATGCAAGCTATAATTAAGGGATTAGAGAAAGTCAAGCAGGAGTTAGTTGCCTCTGAAAGCGATGGTATAGTCTCTGACGTTTTTCGTAAGACATTGAAAGAATTTGTCGACATTGCGGAGACTGAGGTGGCATCTGTGACAAATCTATACTCTGTGGTGGGTAGAAATGCTGATGCACTTGCGCTATATTTTGGTGAGGATCCTGCCCGTTGCCCATTTGAGCAAGTTATAGCAACTCTCTTAAACTTTTTAAGAATGTTTCGCAAAGCACAAGAAGAGAATTCCAAACAGGCCGAATTAGAAAAGAAGAAAACCGAGAAGGAATCAGAAATGGAGAAGGCTAATGGCATTAACCTAAAAAAAAGAGTGGGAAATAGGTGA 5745 43.86 MGCVSSKQAVLVTPALDHSGLFRDNASSGLGHSGRSRSELEKEGKSRVKTKTKATAGLRELGSELGESGRTSSNGGGGESLSFRLRNLHKYLEAEQVAAGWPSWLSAVAGDAIHGWVPLRGDAFEKLEKIGQGTYSNVFRARELETGRIVALKKVRFDNFEPESVRFMAREIMILRRLDHPNIVKLDGLITSRLSCSIYLVFEYMDHDITGLLSCPDVKFSESQIKCYVKQLLSGLEYCHSRGVMHRDIKGSNLLVNNEGVLKVADFGLANFLVSGHRHPLTSRVVTLWYRPPELLLGSTDYGAAVDVWSVGCVFAELLVGKPILQGRTEVEQLHKIFKLCGSPHEEYWRKSKLPHSTLFKPQQPYESCLRATFKEFPSTTVNLLETLLSVEPYKRGTASFALASEYFATKPYELAVSAQESNKISVINSQNLKDEKIIKVGEGPKSSISKIHAKNASQEDIPFSGPLQVLASSGFAWAKMRKENSSMRSLDRSNSRGHNINSLNFSSFSFGRNNSDSNRHEGDLCKDSRCLDSREISKIAIWNQWGKDERPDSFDRSEQYHSQELSLALYLQDEMEAKRSTLACQDEEENVEFSGPLISQSHRMDELLDRHERHIRRIVRKSWFQKGIIMPLFRRLFYRKPPDRLLEISERVYVFDCCFSTDMLEEDQYKVYLGGIVPQLQDYFPDASFMVFNFREGDRRSQIFDILSQYDMTVMDYPRQFEGCPLLPLEMIHHFLRSSESWLSLEGQQNVLLMHCERGGWPVLAFMLAALLLYRKQYNGELKTLDMVYKQAPRELIHLLSPLNPQPSQLRYLQYISRRNLGSDWPPTDMPLLLDSLILRIIPLFDGEKGCRPVIRIYGQDPLTPANRSTKLLYSTSKTKKHVRHYLKAECMRVDIGIHSCVQGDVVLECIHLDEDLVREQMMFRVMFHTAFVRSNKLVFHRDEIDILWDTKDQFPRDFRVEVLFLEADDPVPNLSRVVAHVDANELESASPEEFFEVEEIFSAVVDAPVVKGDYDNQMFHEHPRNSLDQKEVWKNELDPSTFQDCTSDEGNGKQELKMDYNSDSVKDIALDDVQYKIIEEVDSDNSVKDIAIDDGDIKPNFSLLEVEGLKDVIKELVDDGFEKLEETEITVDEEIITLRQESKVSQKKLSADGSRMKSEKSQSLASRKHPTSAKPTNETALAKQKIKQQETQGFLAKQAKPNVLSRWIPPNKGSYANSMHVYYPPSRYISAPAALANSAAASSTDKVDRVRASNSAPEALTCISELSQPSKGDSSSLPSSKEIYSETKIEVAPSHPPPPPPPPTSSYSSSSLLHDLSSKSFIQPSPYFQVDITAPSPPPSPSPSPPPLPFLSNVASNSDTLSSPPIPFIAPSPSPPPPPPSPLQGRAPPPPPPSPFRGAPPPPMRGAPHPPPPPMRGAPHPPPPSMQGAPPPPPPPMQGATHTLPSGGPPPPPPLAARFPSLPAPPRPPGDGPPLPPPLGAKGANVALDARGLAVGRRPSSMNGTSHRRSSLKPLHWSKVTRALQGSLWDEIQRYGEPQIAPEFDVSELETLFSATVPKAADSGGKSGGRRKSVGSKTDKVHLVKPKISILLQLFCNYHVSQAAVLAMDETVLDVDQVENLIKFCPTNEEMELLKGYTGDKDSLGKCEQYFMELMKVPRVESKLRVFSFKIQFRSQISEFRKSLNTINSSCEEVCSELCQTKGDLKKILYLGNTLNQGTARGSAIGFKLDSLLKLTDTRASNSKMTLMHYLCKVLASRSPALLDCHLDVGSLEAASKIQLKSLAEEMQAIIKGLEKVKQELVASESDGIVSDVFRKTLKEFVDIAETEVASVTNLYSVVGRNADALALYFGEDPARCPFEQVIATLLNFLRMFRKAQEENSKQAELEKKKTEKESEMEKANGINLKKRVGNR 1914
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 8003230 8032424 - Bma017154.1 Bma03g00839 79512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma03g00839 1914 Pfam Formin Homology 2 Domain 1511 1875 IPR015425 -
Bma03g00839 1914 MobiDBLite consensus disorder prediction 1881 1907 - -
Bma03g00839 1914 MobiDBLite consensus disorder prediction 1333 1352 - -
Bma03g00839 1914 Pfam C2 domain of PTEN tumour-suppressor protein 830 966 IPR014020 -
Bma03g00839 1914 Gene3D Protein tyrosine phosphatase superfamily 644 835 IPR029021 -
Bma03g00839 1914 ProSitePatterns Protein kinases ATP-binding region signature. 130 153 IPR017441 GO:0005524
Bma03g00839 1914 MobiDBLite consensus disorder prediction 1309 1332 - -
Bma03g00839 1914 PANTHER FORMIN-J 631 1367 - -
Bma03g00839 1914 PANTHER FORMIN-J 1368 1906 - -
Bma03g00839 1914 CDD STKc_CDK9_like 124 408 - -
Bma03g00839 1914 MobiDBLite consensus disorder prediction 1353 1367 - -
Bma03g00839 1914 Coils Coil 1782 1806 - -
Bma03g00839 1914 SMART serkin_6 124 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma03g00839 1914 MobiDBLite consensus disorder prediction 1158 1182 - -
Bma03g00839 1914 MobiDBLite consensus disorder prediction 1263 1285 - -
Bma03g00839 1914 SMART it6_source 1501 1910 IPR015425 -
Bma03g00839 1914 Gene3D Phosphorylase Kinase; domain 1 112 206 - -
Bma03g00839 1914 MobiDBLite consensus disorder prediction 1881 1914 - -
Bma03g00839 1914 MobiDBLite consensus disorder prediction 1368 1482 - -
Bma03g00839 1914 MobiDBLite consensus disorder prediction 1263 1485 - -
Bma03g00839 1914 MobiDBLite consensus disorder prediction 23 79 - -
Bma03g00839 1914 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1592 1902 - -
Bma03g00839 1914 SUPERFAMILY Protein kinase-like (PK-like) 118 412 IPR011009 -
Bma03g00839 1914 Gene3D Formin, FH2 domain 1503 1887 IPR042201 -
Bma03g00839 1914 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 643 818 IPR029021 -
Bma03g00839 1914 ProSitePatterns Serine/Threonine protein kinases active-site signature. 244 256 IPR008271 GO:0004672|GO:0006468
Bma03g00839 1914 Gene3D - 836 966 - -
Bma03g00839 1914 MobiDBLite consensus disorder prediction 1144 1182 - -
Bma03g00839 1914 Gene3D Transferase(Phosphotransferase) domain 1 207 440 - -
Bma03g00839 1914 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 831 968 IPR035892 -
Bma03g00839 1914 SMART PTEN_C2_2 828 968 IPR014020 -
Bma03g00839 1914 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1504 1901 IPR015425 -
Bma03g00839 1914 Pfam Protein kinase domain 124 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma03g00839 1914 Coils Coil 1876 1905 - -
Bma03g00839 1914 ProSiteProfiles Protein kinase domain profile. 124 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma03g00839 1914 MobiDBLite consensus disorder prediction 35 54 - -
Bma03g00839 1914 MobiDBLite consensus disorder prediction 1294 1308 - -
Bma03g00839 1914 ProSiteProfiles C2 tensin-type domain profile. 830 969 IPR014020 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g00839 Bma-Chr3:8003230 Bma14g01446 Bma-Chr14:27858824 0 dispersed
Bma04g00272 Bma-Chr4:2221666 Bma03g00839 Bma-Chr3:8003230 0 transposed
Bma06g00166 Bma-Chr6:2113391 Bma03g00839 Bma-Chr3:8003230 0 transposed
Bma03g00839 Bma-Chr3:8003230 Bma06g00165 Bma-Chr6:2106363 2.25E-82 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66403 PF02181 FH2 8.50E-92 No_clan Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma03g00839 - - csv:101220347 862.062