Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma03g00842 ATGGCTTCCGAGAAAATTCATCGGAAAACCGTTTGTGTGATCGGAGCCGGACCGTCTGGGCTAGTGGCAGCAAGAGAGCTGAGAAAAGAAGGTCACGAGGTAGTTGTTTTAGAACAAAACCATGAAGTGGGAGGACAATGGCTGTACAACCCAAATGTGGAGAGCGAGGATCCCTTAGGAAGAGACGCTTTTCTAAAGGTTCATAGCAGTGTTTACTCATCTTTAAGGCTCATTTCTCCGAGAGAAATCATGGGTTTTACAGATTTTCCATTCTTGGTGAAGAAAGATAGGGATATGAGAAGGTTTCCTAACCACAAGGAACTTCTTTTGTACCTTGTAGATTTCTGTGACTGGTTTGGATTGAGAGAGATGATAAGGTTTAATTGTAGAGTAGAATATGTTGGGATTTTGGATTTCGCTGCTGTTGGAAAGGATTTGAAATGGGTTGTGAGAAGTATAGTAAAAGGGAATGACAACACGGTAGTGGAAGAAGTTTTTGATGCTGTTGTTGTGGCTACTGGCCATTATTCTCATCCTAGATTACCTCCCATTGACGGAATTAATACATGGAGAAGGAAGCAAATGCATAGTCATATTTACAGAGTTCCTGAGCCATTTCACAATGAGGTTGAGGTGGTGGTTGGAAACTCTCTTAGTGGGCAAGACATATCCTTGGAGCTTGTGAGTGTGGCTAAGGAAGTTCACATCAGTGCTAAATCTCTTGATATTTCTCCAGGCTTGTCTAAACTCATTGCCAAACATCACAATTTACAGCTCCATCCCCAGCTGTTAGGGTTTCCTTTTTTTGAGGCACAAGCAAAATGGATAGCTGAGTTGCTGTCTGAGAAAAGAGCACTACCATCATGGGAGGAGATGATGTCCTCCATTCATGACTTTTACCTCTCTAGGGATCTTGCTTCCATCCCCAAACATAATACCCATGATATTGCTAATTTTGAGTATTGTGATAAATATGGAGATAATGTTGGATTCCCACACTTGGAAGAATGGAGGAAAGAGCTGTGCCTATCAGCCTTGATTAATGCTCATTCAAATCTGGACACATACAGAGATTCTTGGAATGATGATGAATTGCTTCAACAGGCCTATCAGAGTCCCCATTTCACTCAATATCACCCTTCAATTTAA 1149 41.6 MASEKIHRKTVCVIGAGPSGLVAARELRKEGHEVVVLEQNHEVGGQWLYNPNVESEDPLGRDAFLKVHSSVYSSLRLISPREIMGFTDFPFLVKKDRDMRRFPNHKELLLYLVDFCDWFGLREMIRFNCRVEYVGILDFAAVGKDLKWVVRSIVKGNDNTVVEEVFDAVVVATGHYSHPRLPPIDGINTWRRKQMHSHIYRVPEPFHNEVEVVVGNSLSGQDISLELVSVAKEVHISAKSLDISPGLSKLIAKHHNLQLHPQLLGFPFFEAQAKWIAELLSEKRALPSWEEMMSSIHDFYLSRDLASIPKHNTHDIANFEYCDKYGDNVGFPHLEEWRKELCLSALINAHSNLDTYRDSWNDDELLQQAYQSPHFTQYHPSI 382
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 8052058 8055278 - Bma017157.1 Bma03g00842 79515

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bma03g00842 382 Pfam Flavin-binding monooxygenase-like 9 240 IPR020946 GO:0004499|GO:0050660|GO:0050661
Bma03g00842 382 Gene3D - 8 207 IPR036188 -
Bma03g00842 382 Gene3D - 251 380 IPR036188 -
Bma03g00842 382 SUPERFAMILY FAD/NAD(P)-binding domain 8 357 IPR036188 -
Bma03g00842 382 PANTHER DIMETHYLANILINE MONOOXYGENASE 6 263 - -
Bma03g00842 382 PANTHER DIMETHYLANILINE MONOOXYGENASE 262 379 - -
Bma03g00842 382 PRINTS Adrenodoxin reductase family signature 33 46 - -
Bma03g00842 382 PRINTS Adrenodoxin reductase family signature 10 32 - -
Bma03g00842 382 PANTHER FLAVIN-CONTAINING MONOOXYGENASE FMO GS-OX-LIKE 8 6 263 - -
Bma03g00842 382 PANTHER FLAVIN-CONTAINING MONOOXYGENASE FMO GS-OX-LIKE 8 262 379 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma03g00842 - - - nnu:104598016 485.723
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g00842 Bma-Chr3:8052058 Bma12g00154 Bma-Chr12:2186705 1.07E-19 dispersed
Bma03g00842 Bma-Chr3:8052058 Bma07g00487 Bma-Chr7:5913815 6.51E-14 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g609 Blo04g00784 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Lsi02g00096 . Chy12g01520 Cme12g01966 . . . Bda14g00865 . . Bma03g00842 . Sed08g2095 . . . . . . . . Bhi08g01127 Tan05g2408 Cmetu06g2174 . Hepe07g1737 . . Cla04g01176 Cam04g1233 Cec01g1744 Cco01g1790 Clacu04g1261 Cmu04g1240 Cre01g1534 . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0009615 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3 1 1 1 1 1 1 1 1 1 1 1 1 33
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bma03g00842 Bma_Chr03 FPKM 20.641474 22.866726 27.129099 28.578768 44.159107 37.605278 40.945518 0.0 0.0 0.0