Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma03g00857 AAGATGATTTCTAATCCAAAAGAAAAGGGCAAGGTTCAAGCAAAGCAAGACGGTGAGATAAGCAACTATGGGAAGCTCTCAATGGCATCTTCAACTGCAAGGCAATGGCCGGGCTTGAGGAACCCGAGAATTGTTCGAGTTTCTCGATCGTTCGGAGGAAAAGATCGACATAGTAAAGTATGCACAATTAGAGGATTGAGAGACAGAAGGATTAGGCTTTCAGTCCCCACTGCAATTCAGCTTTATGATCTTCAAGAACGGCTCGGCCTCGGCCAGCCCAGCAAGGTGATCGATTGGCTGCTAGAAGTCACCAAACTTGATATCGATAAGCTCCCTCCTCTCCAAATTCCTCAAGAATTTGGCCAGTTCCCTCAACAGATGCTTGTTTCTCATGATTTTGTCAACAGTCAATCTTCATCAATTCCTCCATTTTTTGACCCTCCAAATACTTCTTCAGAATTTTTGAAGGGTGGTTTGGAAGATAATTTTCCAGTGAGAGCAAAAAGTAAAGGGAAGTGGACAAGTGATCACACAAGTCAAGATAGAATTGCTGATTTTCGTACACAAATTGAAGCACATAATTTTCTTCTCAACAATTCTCTTTCTGAAAATACTTCCAGTTCATCACTGGGAGGAGGGCACCCATTCTTTTCGCCGCAAATCGAAGATCATCACCCCAGCGAAGCCCCTTTCTTCGCCCCGTCGGGATCTCAGCTTTTCTTCTATCCGCCATCGACGATGCCTACACTCTTTACTCCTTATCCTTCCTATATCACTACCCAAGTTGAGAATGATCAAAGGCAACTCAACCATTTTCAACTCCTCGGATCGAGTTTATCCGTCGTACCCACTCTTCATTCATTTCCAAAGCTTCTCATTTCTCAAAACAATGGAAGCCAACAGAAAGACAATGCCACCGGCTCATGA 927 43.8 KMISNPKEKGKVQAKQDGEISNYGKLSMASSTARQWPGLRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQERLGLGQPSKVIDWLLEVTKLDIDKLPPLQIPQEFGQFPQQMLVSHDFVNSQSSSIPPFFDPPNTSSEFLKGGLEDNFPVRAKSKGKWTSDHTSQDRIADFRTQIEAHNFLLNNSLSENTSSSSLGGGHPFFSPQIEDHHPSEAPFFAPSGSQLFFYPPSTMPTLFTPYPSYITTQVENDQRQLNHFQLLGSSLSVVPTLHSFPKLLISQNNGSQQKDNATGS 308
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 8234956 8235882 + Bma017173.1 Bma03g00857 79530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma03g00857 308 MobiDBLite consensus disorder prediction 206 227 - -
Bma03g00857 308 Pfam TCP family transcription factor 53 166 IPR017887 -
Bma03g00857 308 ProSiteProfiles TCP domain profile. 53 111 IPR017887 -
Bma03g00857 308 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 2 291 IPR005333 GO:0003700
Bma03g00857 308 PANTHER TRANSCRIPTION FACTOR TCP17 2 291 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma03g00857 Bma06g00019 CCT
Bma03g00857 Bma08g00244 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g00857 Bma-Chr3:8234956 Bma08g00244 Bma-Chr8:3055317 1.82E-58 dispersed
Bma03g00857 Bma-Chr3:8234956 Bma06g00019 Bma-Chr6:446399 5.19E-152 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
57033 PF03634 TCP 1.10E-24 No_clan Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma03g00857 - - tcc:18604854 270.781