Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bma03g00881 ATGGGATTATCCAAAGCTCTCTTACTTTCTCTTCTTCTTTCTTTAAATTGCTTCAGCGGAAGCAGCACGGAATTTGAAGTGGGTGATGAAGATGGGTGGGTCGTTCCTCAAGCAAAGAGTGACAGCCAAAAGTACAACCAGTGGGCCTCCAGAAACAGGTTCAAGGTTGACGACACAGTTCACTTCAAGTACGAGAAAGACTCAGTTTTGGTGGTGACAGAGGACGAATATGACCAGTGTCATTCTTCCCGCCCACTCTTCTTCTCCAACAACGGCGATTCAGTGTTCAAACTGGACAGACCAGGGCTCTTCTTCTTCATCAGCGGAGTTTCCGGCCACTGCGAGAGGGGCCAGAAGATGATCATCAAAGTGCTGGATGTAGCCGCAGCTTCTCCCGTACCAGCCAATCAAACTGTCGCCGCTGCTCCTCACATTTCTGCCCCCATCATTCTCCTGCTGGCTTTCCCATTTGCTGGGATGCTATTCGCCTGA 492 50.0 MGLSKALLLSLLLSLNCFSGSSTEFEVGDEDGWVVPQAKSDSQKYNQWASRNRFKVDDTVHFKYEKDSVLVVTEDEYDQCHSSRPLFFSNNGDSVFKLDRPGLFFFISGVSGHCERGQKMIIKVLDVAAASPVPANQTVAAAPHISAPIILLLAFPFAGMLFA 163
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
3 8622619 8623189 - Bma017200.1 Bma03g00881 79554
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bma03g00881 163 Pfam Plastocyanin-like domain 38 118 IPR003245 GO:0009055
Bma03g00881 163 PANTHER EARLY NODULIN-LIKE PROTEIN 5 5 136 - -
Bma03g00881 163 Gene3D - 22 129 IPR008972 -
Bma03g00881 163 SUPERFAMILY Cupredoxins 22 125 IPR008972 -
Bma03g00881 163 CDD OsENODL1_like 23 125 IPR041846 -
Bma03g00881 163 ProSiteProfiles Phytocyanin domain profile. 23 126 IPR003245 GO:0009055
Bma03g00881 163 PANTHER BLUE COPPER PROTEIN 5 136 IPR039391 GO:0009055
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g00881 Bma-Chr3:8622619 Bma12g00729 Bma-Chr12:33309745 1.53E-32 dispersed
Bma03g00881 Bma-Chr3:8622619 Bma02g00378 Bma-Chr2:5927463 1.95E-43 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma03g00881 - - jre:109003316 193.356