Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bma03g00881 | ATGGGATTATCCAAAGCTCTCTTACTTTCTCTTCTTCTTTCTTTAAATTGCTTCAGCGGAAGCAGCACGGAATTTGAAGTGGGTGATGAAGATGGGTGGGTCGTTCCTCAAGCAAAGAGTGACAGCCAAAAGTACAACCAGTGGGCCTCCAGAAACAGGTTCAAGGTTGACGACACAGTTCACTTCAAGTACGAGAAAGACTCAGTTTTGGTGGTGACAGAGGACGAATATGACCAGTGTCATTCTTCCCGCCCACTCTTCTTCTCCAACAACGGCGATTCAGTGTTCAAACTGGACAGACCAGGGCTCTTCTTCTTCATCAGCGGAGTTTCCGGCCACTGCGAGAGGGGCCAGAAGATGATCATCAAAGTGCTGGATGTAGCCGCAGCTTCTCCCGTACCAGCCAATCAAACTGTCGCCGCTGCTCCTCACATTTCTGCCCCCATCATTCTCCTGCTGGCTTTCCCATTTGCTGGGATGCTATTCGCCTGA | 492 | 50.0 | MGLSKALLLSLLLSLNCFSGSSTEFEVGDEDGWVVPQAKSDSQKYNQWASRNRFKVDDTVHFKYEKDSVLVVTEDEYDQCHSSRPLFFSNNGDSVFKLDRPGLFFFISGVSGHCERGQKMIIKVLDVAAASPVPANQTVAAAPHISAPIILLLAFPFAGMLFA | 163 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 8622619 | 8623189 | - | Bma017200.1 | Bma03g00881 | 79554 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bma03g00881 | 163 | Pfam | Plastocyanin-like domain | 38 | 118 | IPR003245 | GO:0009055 | |
| Bma03g00881 | 163 | PANTHER | EARLY NODULIN-LIKE PROTEIN 5 | 5 | 136 | - | - | |
| Bma03g00881 | 163 | Gene3D | - | 22 | 129 | IPR008972 | - | |
| Bma03g00881 | 163 | SUPERFAMILY | Cupredoxins | 22 | 125 | IPR008972 | - | |
| Bma03g00881 | 163 | CDD | OsENODL1_like | 23 | 125 | IPR041846 | - | |
| Bma03g00881 | 163 | ProSiteProfiles | Phytocyanin domain profile. | 23 | 126 | IPR003245 | GO:0009055 | |
| Bma03g00881 | 163 | PANTHER | BLUE COPPER PROTEIN | 5 | 136 | IPR039391 | GO:0009055 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bma03g00881 | Bma-Chr3:8622619 | Bma12g00729 | Bma-Chr12:33309745 | 1.53E-32 | dispersed | |
| Bma03g00881 | Bma-Chr3:8622619 | Bma02g00378 | Bma-Chr2:5927463 | 1.95E-43 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bma03g00881 | - | - | jre:109003316 | 193.356 |