Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma03g00899 ATGGCCTCGACCTGCGACGCTTGCCGAAAATCGGGTGGGTTGTGCCGGTCGAACGATTCATTTCCATTTCTCTGCTGGTGCCGCGGTCAAGCCCCTCAGCCGTTTAATAAATGTCCAGCTCCAGACATAAAGAATGTGAGAAAGAAGATCATAATAGGTGTTTGCTCAGGTCTCGGAGGTGTACTTCTGATGTGCTTTGTCTTTCTCATCTTGGCATACCGCAAGAATAATAAATATTTTTTCTCATCTGTTGTACCTCGAAGCTTTTCCTCGTACTTCTCCTCACAAAGTACCGTTGAAAAGGAATGTATCTACGCTGGTGTTCATCTATTTTCATACAGTGAACTCGAAGAAGCTACCAACAAATTTGATTCCGTTAACGAACTTGGAGATGGAGGATTTGGTACTGTATATTATGGGAAACTTCGGGATGGCCGAACTGTAGCAGTAAAACGCTTGCATGAAAATAATTTCAAGAGAGTTGAGCAGTTCAGGAATGAAGTAGAAATTCTTTCTCCTCTACGCCACGAGAATCTTGTTTCTCTATATGGTTGTACATCTAGACAGTGTAATGAACTCTTGCTTGTTTATGAATACATCCCCAATGGCACAGTAGCTGACCATCTTCACGGCAACAGAGCGAAACCAGGTGAACTTCGATGGTCGACTCGGATGAAAGTAGCGATAGAGACGGCAAGTGCATTGGTCTATCTCCATGCTTCAGGTATCATCCACCGTGACATCAAAACGAGCAATATTCTCCTCGACCACAATTTTCATGTTAAAGTTGCAGATTTTGGACTCTCTCGGCCTTTCCCAACCAATGTATCCCACATCTCGACTGCTCCTCAAGGAACTCCTGGCTATCTTGATCCAGAATATAATGAATGTTACCAATTAACTGATAAAAGCGACGTCTACAGCTTTGGAGTGGTCTTAATGGAGCTTATATCATCCAAGCCTGCCGTTGATATCACAAGGCATAAACATGAGATTAATTTATCAACCATGGCTATTAATAAGATCCTGAATTGCGCACTGAACGAGCTTGTCGACCCTCATCTTGATTTTGAATCAGACATCAGAATAAGAGAAATGATCAGCTCTTTGTCAGAGTTGGCGTTTCAATGTTTGCAGAGCGTGAAGGATGCAAGGCCATCCATGGCTGATGTTCTACAAGCTTTGCATCACATAGAGAATGGAGATTGCAGTAAAGAAAAGTCATTGGACATTGATAATAATGTAGGTGAAGAATTGCTCAAGAATGAACGTTTGAATCTTGCACAGGATACCGGTGATGTGCGTTGGTTTAGCACTTCTGCAACACCAAGTAACAGCCGATAA 1344 42.63 MASTCDACRKSGGLCRSNDSFPFLCWCRGQAPQPFNKCPAPDIKNVRKKIIIGVCSGLGGVLLMCFVFLILAYRKNNKYFFSSVVPRSFSSYFSSQSTVEKECIYAGVHLFSYSELEEATNKFDSVNELGDGGFGTVYYGKLRDGRTVAVKRLHENNFKRVEQFRNEVEILSPLRHENLVSLYGCTSRQCNELLLVYEYIPNGTVADHLHGNRAKPGELRWSTRMKVAIETASALVYLHASGIIHRDIKTSNILLDHNFHVKVADFGLSRPFPTNVSHISTAPQGTPGYLDPEYNECYQLTDKSDVYSFGVVLMELISSKPAVDITRHKHEINLSTMAINKILNCALNELVDPHLDFESDIRIREMISSLSELAFQCLQSVKDARPSMADVLQALHHIENGDCSKEKSLDIDNNVGEELLKNERLNLAQDTGDVRWFSTSATPSNSR 447
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 8936250 8940300 - Bma017224.1 Bma03g00899 79572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma03g00899 447 Gene3D Phosphorylase Kinase; domain 1 92 199 - -
Bma03g00899 447 ProSiteProfiles Protein kinase domain profile. 123 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma03g00899 447 SUPERFAMILY Protein kinase-like (PK-like) 100 396 IPR011009 -
Bma03g00899 447 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 4 427 IPR044652 -
Bma03g00899 447 CDD STKc_IRAK 129 395 - -
Bma03g00899 447 Pfam Protein kinase domain 125 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma03g00899 447 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 4 427 - -
Bma03g00899 447 SMART serkin_6 123 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma03g00899 447 ProSitePatterns Protein kinases ATP-binding region signature. 129 151 IPR017441 GO:0005524
Bma03g00899 447 Gene3D Transferase(Phosphotransferase) domain 1 200 410 - -
Bma03g00899 447 ProSitePatterns Serine/Threonine protein kinases active-site signature. 243 255 IPR008271 GO:0004672|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma03g00899 Bma06g00049 CCT
Bma03g00899 Bma06g00049 ECH
Bma03g00899 Bma08g00058 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g00899 Bma-Chr3:8936250 Bma14g01106 Bma-Chr14:13884990 1.20E-152 dispersed
Bma01g00774 Bma-Chr1:7119566 Bma03g00899 Bma-Chr3:8936250 4.89E-88 transposed
Bma08g00058 Bma-Chr8:741666 Bma03g00899 Bma-Chr3:8936250 0 transposed
Bma09g00327 Bma-Chr9:28302473 Bma03g00899 Bma-Chr3:8936250 3.58E-86 transposed
Bma03g00899 Bma-Chr3:8936250 Bma06g00049 Bma-Chr6:825598 1.96E-175 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66407 PF00069 Pkinase 1.00E-49 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma03g00899 - - zju:107418610 539.265