Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma03g00910 ATGGTGGATTCTCCGGTAAGTCCACAAACCGGTGGCCGGTCATCCTTGATGGACAGCCTCTTGGGGTTGCTTAGGATCCGAGTCAAACGCGGCATAAATCTGGCCGTTCGTGACGTCCGAAGCAGCGATCCATACGCCGTCGCATACAAATTAATGCAGAAATTGAAGACCCGTGTGATCAAGAAAGATGTTAACCCAGAATGGAACGAAGATCTAACTCTCTCTGTCACTGACCCTAGTCTTCCGGTCAAGCTGACAGTGTACGACCACGACACGTTTAGCATGGACGACAAAATGGGGGAGGTCGAGTTCGACATCCGACCATATATAGAAGCATTGAAGATGAACTTGGGAGGGCTTCCGAGCGGGACAATAATCTCGAGAGTTCAACCGAGCAGACAAAATTGCCTATCGGAAGAAAGCTCAATTTTATGGAAAGATGGGAAAGTAGTTCAAGACCTTTGTCTTAGGCTCCGAAACGTCGAATGTGGCGAAGTAGAACTTCAATTGCAATGGATTGACCTTCCTGGCTCCAAAGGCTTA 543 48.25 MVDSPVSPQTGGRSSLMDSLLGLLRIRVKRGINLAVRDVRSSDPYAVAYKLMQKLKTRVIKKDVNPEWNEDLTLSVTDPSLPVKLTVYDHDTFSMDDKMGEVEFDIRPYIEALKMNLGGLPSGTIISRVQPSRQNCLSEESSILWKDGKVVQDLCLRLRNVECGEVELQLQWIDLPGSKGL 181
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 9076041 9076785 - Bma031000 Bma03g00910 79583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma03g00910 181 CDD C2_ArfGAP 21 164 - -
Bma03g00910 181 ProSiteProfiles C2 domain profile. 4 119 IPR000008 -
Bma03g00910 181 SMART C2_3c 23 118 IPR000008 -
Bma03g00910 181 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 11 180 IPR044562 -
Bma03g00910 181 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 19 107 IPR035892 -
Bma03g00910 181 Gene3D C2 domain 18 179 IPR035892 -
Bma03g00910 181 Pfam C2 domain 22 108 IPR000008 -
Bma03g00910 181 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4-LIKE 11 180 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g01143 Bma-Chr1:12393069 Bma03g00910 Bma-Chr3:9076041 4.53E-80 dispersed
Bma02g00511 Bma-Chr2:10166749 Bma03g00910 Bma-Chr3:9076041 4.46E-82 dispersed
Bma03g00910 Bma-Chr3:9076041 Bma08g00055 Bma-Chr8:725775 1.97E-81 dispersed
Bma11g00445 Bma-Chr11:5022554 Bma03g00910 Bma-Chr3:9076041 8.31E-38 dispersed
Bma11g00465 Bma-Chr11:5575051 Bma03g00910 Bma-Chr3:9076041 1.96E-38 dispersed
Bma12g01244 Bma-Chr12:45450317 Bma03g00910 Bma-Chr3:9076041 1.16E-84 wgd
Bma03g00910 Bma-Chr3:9076041 Bma06g00063 Bma-Chr6:1011197 8.90E-108 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma03g00910 - - mnt:21400368 311.612