Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma03g00926 ATGGGGAAGAAGAAAAATTTGTCTGGAGGTGCCATTGCAGGAATTATAATTGGATCCGTATTGGGATTCATTCTGATTCTCTTACTATTAATGCTTCTATGCAGAAGGAGGAGGAGCAAAAAAACGCGCTCTATAGATATGACGGCAGTGAAGAATCCGGACCCGGAAACTCCGGGCGACAAAACAGCCAAAGAAGTCGAAAATGACGGATCCAACAAAGGGTTCTCTGCATCGACTGTACCTGCTGCATCAATGGTGGGAAATTCAAAAACCGAATCGAACGAAGTAGGAAAGGGGAAAAAACTGGTTTTCTTTGGAAACGCAGCTCAGTTGTTTGCTTTGGAGGATTTACTGAGAGCTTCGGCGGAGGTGTTGGGAAAAGGAACCTTCGGAACAGCTTACAAGGCTGCAATGGACGTCGGAGCTGTGGTGGCGGTGAAGAGATTGACAGATGTGACGATTTCAGAGAGAGAATTCAAGGAGAAGATTGAAATTGTTGGAAGAATGAATCATCAAAATCTAGTCCCTCTCAGAGCTTATTATTTCAGCAAAGAAGAAAAGCTTCTTGTCTGTGATTACATGTCCATGGGAAGCTTATCTGCTCTTTTGCATGGAAACACAGGAGCAAGTAGAACTCCATTAAACTGGGAAATGAGGTCAAACATTGCTCTTGGAGCTGCTCGCGGAATAGAATACCTCCATAGCCAAGGCTCCGATGTCTCCCATGGAAACATAAAATCCTCCAACGTCCTCTTGACGAACTCCTACGAGGGTCGAGTCTCCGATTTTGGTTTAGCACCCCTCGTCGGAACGCCCTCCGCGCCAAACAGAGTCGCCGGGTATAGAGCGCCTGAGGTTACAGACCCTCGGAAAGTGTCCCAAAAAGCAGACGTTTACAGCTTTGGCGTATTGCTTTTAGAGCTTCTGACCGGAAAGCCTCCGACCCAATCTCTGTTAAACGAGGAAGGGGTCGATCTACCCCGATGGGTTCAGTCGGTGGTGCGAGAGGAATGGACGTCTGAGGTTTTCGATCTTGAACTTCTCCGTTACCAAACTGCAGAAGGCGACATGGTTCAGATGCTGCAACTGGCCGTGGATTGCGCCGCTCAATATCCCGACAAGCGTCCATCAATGGCGGAAGTGACAAAAAGAATCCAAGAGCTCAGCCCATCCGCTCTGCACCCAGATTCGAACAGGGACCCGCCGTCAGTCGACGAAACTTAA 1224 48.2 MGKKKNLSGGAIAGIIIGSVLGFILILLLLMLLCRRRRSKKTRSIDMTAVKNPDPETPGDKTAKEVENDGSNKGFSASTVPAASMVGNSKTESNEVGKGKKLVFFGNAAQLFALEDLLRASAEVLGKGTFGTAYKAAMDVGAVVAVKRLTDVTISEREFKEKIEIVGRMNHQNLVPLRAYYFSKEEKLLVCDYMSMGSLSALLHGNTGASRTPLNWEMRSNIALGAARGIEYLHSQGSDVSHGNIKSSNVLLTNSYEGRVSDFGLAPLVGTPSAPNRVAGYRAPEVTDPRKVSQKADVYSFGVLLLELLTGKPPTQSLLNEEGVDLPRWVQSVVREEWTSEVFDLELLRYQTAEGDMVQMLQLAVDCAAQYPDKRPSMAEVTKRIQELSPSALHPDSNRDPPSVDET 407
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 9604459 9605767 - Bma017251.1 Bma03g00926 79599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma03g00926 407 ProSitePatterns Protein kinases ATP-binding region signature. 125 147 IPR017441 GO:0005524
Bma03g00926 407 ProSiteProfiles Protein kinase domain profile. 119 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma03g00926 407 PANTHER INACTIVE RECEPTOR KINASE-RELATED 3 394 - -
Bma03g00926 407 Gene3D Phosphorylase Kinase; domain 1 84 193 - -
Bma03g00926 407 MobiDBLite consensus disorder prediction 43 75 - -
Bma03g00926 407 Pfam Protein kinase domain 122 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma03g00926 407 Gene3D Transferase(Phosphotransferase) domain 1 194 399 - -
Bma03g00926 407 PANTHER OS05G0588300 PROTEIN 3 394 - -
Bma03g00926 407 MobiDBLite consensus disorder prediction 376 407 - -
Bma03g00926 407 SUPERFAMILY Protein kinase-like (PK-like) 123 395 IPR011009 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma03g00926 Bma08g00107 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g00926 Bma-Chr3:9604459 Bma08g00107 Bma-Chr8:1273070 0 dispersed
Bma03g00926 Bma-Chr3:9604459 Bma12g01282 Bma-Chr12:45808296 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66408 PF00069 Pkinase 7.80E-39 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma03g00926 - - qsu:112023272 553.132