Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma03g00947 ATGCTATCAAGGTTGATGAACTTTTTGAGGGCCTGTTGGAGGCCATCCTCCGACCCTTTTCTCCAAACTGGCTCAGATGCAACCGGCCGGCAAGATGGGTTACTTTGGTACAAGGATATTGGGCAGCACACCTGCGGTGAATTTTCAATGGCGGTGGTTCAGGCCAATAATTTGTTGGAGGATCAGAGCCAAATTGAGTCAGGCGCTTTAAGCTCACTCGACTCCGGCCCTTACGGCACCTTCGTTGGTGTCTACGATGGTCACGGAGGACCCGAGACATCTCGTTTCGTTTGCGATCATTTATTCCACCATCTCAAAAGATTTGCATCAGAGCAACTATCGATGTCAGTCGAGGTGATCAGGAAAGCATATCAAGCAACCGAGGAGGGGTTTTCATCCGTTGTTGCCAAACAATGGCCGATGAAGCCCCAAATAGCTGCAGTAGGATCTTGCTGCTTGGTTGGTGTGATTTGTGGAGGCACACTTTACATTGCGAACCTTGGAGATTCTCGGGCTGTTCTCGGGAGGCTTATGAGGTCTACAGGGGAGGTTCTTGCCATTCCCCTCTCTGCAGAACATAATGTCGGAATCGAATCCGTTAGGCAGGAGATGCACTCTTTGCACCCTGATGACTCCCATATTGTTGTTCTAAAGCACAATGTATGGCGAGTAAAAGGCTTGATACAGATATCCAGATCTATTGGTGATGTATATTTGAAAAGGCCTGAATACAATAGGGAGCCTCTTTATGCTAAGTTTCGCCTCCGAGAACCCTTCAGGAGGCCAATTTTGAGTTCCGAACCGTCAATTTCTGTACACGAGCTTCAGGCACACGATCAATTTCTGATTTTTGCTTCTGATGGGCTATGGGAGCATCTTACCAATCAGGAAGCCGTCGATATTGTCCAAAATCATCCTCGCACTGGAATTGCTCGGAGGCTCATAAAAACCGTGTTGCAGGAAGCAGCTAAGAAAAGAGAGATGCGATATTCCGATCTAAAGAAAATCGACCGTGGTGTCCGCCGCCATTTTCATGACGATATTACAGTGATCGTCGTATTTCTTGACTCAAATCTTGTGAGCAGAGCCAGCTCAGTTAGAGGTCCCGTCGCGTCGTTAAGAGGTGGAGGAATTAATGTGACTGCAAAATCTCTTGCTACTTGTGCCACTCCAAACCAGCTCAGATCAACTTGA 1194 47.57 MLSRLMNFLRACWRPSSDPFLQTGSDATGRQDGLLWYKDIGQHTCGEFSMAVVQANNLLEDQSQIESGALSSLDSGPYGTFVGVYDGHGGPETSRFVCDHLFHHLKRFASEQLSMSVEVIRKAYQATEEGFSSVVAKQWPMKPQIAAVGSCCLVGVICGGTLYIANLGDSRAVLGRLMRSTGEVLAIPLSAEHNVGIESVRQEMHSLHPDDSHIVVLKHNVWRVKGLIQISRSIGDVYLKRPEYNREPLYAKFRLREPFRRPILSSEPSISVHELQAHDQFLIFASDGLWEHLTNQEAVDIVQNHPRTGIARRLIKTVLQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSNLVSRASSVRGPVASLRGGGINVTAKSLATCATPNQLRST 397
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 10028382 10030116 - Bma017284.1 Bma03g00947 79620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma03g00947 397 ProSiteProfiles PPM-type phosphatase domain profile. 44 355 IPR001932 -
Bma03g00947 397 PANTHER ALPHABET, ISOFORM E-RELATED 5 386 - -
Bma03g00947 397 SUPERFAMILY PP2C-like 56 356 IPR036457 -
Bma03g00947 397 ProSitePatterns PPM-type phosphatase domain signature. 81 89 IPR000222 GO:0043169
Bma03g00947 397 Pfam Protein phosphatase 2C 78 324 IPR001932 -
Bma03g00947 397 Gene3D - 36 365 IPR036457 -
Bma03g00947 397 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN 5 386 - -
Bma03g00947 397 CDD PP2Cc 48 355 IPR001932 -
Bma03g00947 397 SMART PP2C_4 41 353 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g00947 Bma-Chr3:10028382 Bma12g00917 Bma-Chr12:40612620 0 dispersed
Bma03g00947 Bma-Chr3:10028382 Bma03g00616 Bma-Chr3:5088697 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma03g00947 K01102 - nnu:104603663 691.804