Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma03g00980 ATGGCCAAGTTAGTGGAGCCTCCAGACAGATTTAAGGCAAAGGGGAAGCACTATTACACAATGTGGAATACATTGTTCGAGCTTGATTTGAAATATGTTCCGATCAAACCGCTAGGCAGAGGGTCATACGGAGTGGTGTGCTCTTCCATTAACAGGGACACCAGTGAGAGAGTTGCGATCAAGAAGATCAGCAACACATTCGACCATCCAACCTGTGCATTGAGAACTCTGAGGGAGCTGACGTTGCTGCGGAAGATTCTACATCGCAATGTGATCGCTTTGAAGGATGTGATGATGCCCAGCCATAGATCCAGCTTCAAGGATGTGTATTTGGTTTACGAGCTGATGGATACGGATCTCGATCGAATTATTAACTCCTCAATACCCCTTTCAACTGATCATTGCCAGTATTTCCTCTTTCAGTTGCTTGAGGGGCTGAAACACATACATTCCAGCAATGTTCTTCACCGCGATTTGAAGCCCACGAACCTCCTTGTCAACGCCAACTTCGAGTTGAAGATTTGTGATTTTGGACTGGCGAGGACGAAGCAAGAAAATGACGAGTGTATGACTAAGTATGTCGTCACATGTTGGTATCGTGCCCCAGAGATACTATTGGGTTGTGACAACTATGGAACTTCAATTGACATGTGGTCTGTTGGTTGCATATTAGCTGAAATTCTTGGGAGGACGCCTATCTTTCCAGGCACTGATAGTCTAAACCAGCTGAATTTAATCATCGACCTTCTTGGCAGTCAGCAAGAAGAAGATTTGGAGTTTATCAAGAGTCCAAATGTGAAAGAGTACATAAAATCGCTTCCTTTTACAAGGGGAGTGGACTTTTCGCGTTGTTATCCTAGTGCTGATCCATTGGCCGTAGATTTGTTGCAAAAGATGCTCGTTTTTAATCCAACTAAAAGAATTTCAGCAACAGAAGCACTTGAGCATCCTTTCATGAAAGAATTTTGCGACCCTAAAGATTTTCCACCAGGTCCCCCAGCCATCGATCTCGACGTAGATGAGAAGGTCGGAGTAGACACGATCAGAGAGATGATTTTTAAGGAGATACTTTATTATCATCCCGAAGCTTCTTTTTTATAG 1101 43.69 MAKLVEPPDRFKAKGKHYYTMWNTLFELDLKYVPIKPLGRGSYGVVCSSINRDTSERVAIKKISNTFDHPTCALRTLRELTLLRKILHRNVIALKDVMMPSHRSSFKDVYLVYELMDTDLDRIINSSIPLSTDHCQYFLFQLLEGLKHIHSSNVLHRDLKPTNLLVNANFELKICDFGLARTKQENDECMTKYVVTCWYRAPEILLGCDNYGTSIDMWSVGCILAEILGRTPIFPGTDSLNQLNLIIDLLGSQQEEDLEFIKSPNVKEYIKSLPFTRGVDFSRCYPSADPLAVDLLQKMLVFNPTKRISATEALEHPFMKEFCDPKDFPPGPPAIDLDVDEKVGVDTIREMIFKEILYYHPEASFL 366
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 10453722 10454949 - Bma017321.1 Bma03g00980 79653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma03g00980 366 ProSitePatterns Protein kinases ATP-binding region signature. 38 62 IPR017441 GO:0005524
Bma03g00980 366 Gene3D Transferase(Phosphotransferase) domain 1 116 345 - -
Bma03g00980 366 Gene3D Phosphorylase Kinase; domain 1 19 355 - -
Bma03g00980 366 ProSiteProfiles Protein kinase domain profile. 32 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma03g00980 366 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 11 364 - -
Bma03g00980 366 Pfam Protein kinase domain 33 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma03g00980 366 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 11 364 - -
Bma03g00980 366 SMART serkin_6 32 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma03g00980 366 SUPERFAMILY Protein kinase-like (PK-like) 31 327 IPR011009 -
Bma03g00980 366 ProSitePatterns Serine/Threonine protein kinases active-site signature. 154 166 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g00980 Bma-Chr3:10453722 Bma14g00601 Bma-Chr14:6518582 1.28E-125 dispersed
Bma03g00980 Bma-Chr3:10453722 Bma03g00981 Bma-Chr3:10482002 9.09E-62 tandem
Bma01g00681 Bma-Chr1:6251390 Bma03g00980 Bma-Chr3:10453722 0 transposed
Bma03g01015 Bma-Chr3:11281522 Bma03g00980 Bma-Chr3:10453722 0 transposed
Bma01g00750 Bma-Chr1:6890977 Bma03g00980 Bma-Chr3:10453722 1.98E-180 wgd
Bma03g00980 Bma-Chr3:10453722 Bma06g00112 Bma-Chr6:1573649 5.41E-86 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66411 PF00069 Pkinase 9.90E-68 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma03g00980 - - jre:108993546 526.554