Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma03g00998 ATGGACTATAAAGATACTCATGTAACCACTGCCGTTCATGGGACGATCGGCCATATAGCCCCTGAGTATCTTTCCACTGGAAAATCATCGGAGAAGACCGATGTTTTTGGGTATGGAATTATGCTTCTGGAATTAATAACTGGGCAGAGAGCTTTCGATCTTGCTCGGCTTGCAAACGACGAAGATGTCATGCTGCTAGATTGGGTGAAAGGACTTCTAAAAGAGAAGAAATTGGAGATGCTTGTGGATCCTGATCTGCAGAAACAATATGATGAAATTGAAGTGGAGCAACTAATCCAAGTGGCCCTTCTCTGCACTCAAGGCTCACCTATGGAGCGGCCGAAGATGTCGGAGGTGGTCAGAATGCTCGAAGGTGATGGATTGAACGAGAGATGGGATGAGTGGCAGAAAGTCGAGGTCGTCTACCACGACATCGAGATGGCATCCTCCGAAAATTCCGAATGGATTGTCGACTCCTACGACAACCTCCACACTTTCGAACTGTCCGGACCCAGATAA 519 47.21 MDYKDTHVTTAVHGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDEDVMLLDWVKGLLKEKKLEMLVDPDLQKQYDEIEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGDGLNERWDEWQKVEVVYHDIEMASSENSEWIVDSYDNLHTFELSGPR 172
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 10880338 10880942 + Bma017342.1 Bma03g00998 79671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma03g00998 172 Pfam Protein tyrosine and serine/threonine kinase 7 123 IPR001245 GO:0004672|GO:0006468
Bma03g00998 172 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 1 172 - -
Bma03g00998 172 ProSiteProfiles Protein kinase domain profile. 1 136 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma03g00998 172 Gene3D Transferase(Phosphotransferase) domain 1 1 143 - -
Bma03g00998 172 PANTHER LRR RECEPTOR KINASE BAK1 1 172 - -
Bma03g00998 172 SUPERFAMILY Protein kinase-like (PK-like) 4 150 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g00998 Bma-Chr3:10880338 Bma01g02531 Bma-Chr1:83013773 5.22E-103 dispersed
Bma03g00998 Bma-Chr3:10880338 Bma12g00395 Bma-Chr12:8275186 3.06E-88 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66413 PF07714 PK_Tyr_Ser-Thr 4.00E-09 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma03g00998 K13418 - csv:101208905 296.975