Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma03g01015 ATGGCCAAGTCAGTGGAGCCGCCTGACGGATTTAAGGCAAAGGGGAAGCACTATTACACAATGTGGAATACATTGTTCGAGCTTGATTTGAAATATGTTCTGATCAAACCGCTAGGCAGAGGGTCATACGGAGTGGTGTGCTCTTCCATTAACAGGGAAACCAGTGAGAGAGTTGCGATCAAGAAGATCAGCAACACATTCGACCATCCAATCAATGCATTGAGAACTCTGAGGGAGCTGACGTTGCTGCGGAAGATTCAACATCCCAATGTGATCGCTTTGAAGGATGTGATGATGCCCACCCATAGATCGAGCTTCAAGGATGTGTATTTGGTTTACGAGCTGATGGATACGGATCTCGATCGAATTATTAACTCCTCAGAACCCCTTTCAACTGATCATTGCCAGTATTTCCTCTTTCAGGTATTTGAATCTGACTCTTGCTTTGACAATTTTAATTTTTCTGCATCATTCTCTCCAACCTCCTTGGAATTTCTCTTTACAAATTTCTTATATGTTTTATTCCTGCATTTGCAGTTGCTTGAGGGGCTGAAATACATACATTCCGGCAATGTTCTTCACCGTGATTTGAAGCCCGGGAACCTCCTTGTCAACGCCAACTGCGATTTGAAGATTTGTGATTTTGGACTAGCGAGGACAAAGCAAGAAAATAACGAGTGTATGACTACGTATGTCGTCACACGTTGGTATCGTGCCCCAGAGATACTACTGGGTTGTGACAACTATGGAACTTCGATTGACATGTGGTCTGTTGGTTGCATATTTGCTGAAATTCTTGAGAGGAAGCCTATCTTTCCAGGCACTGATAATCTAAACCAGCTGAATTTAATCATCGACCTTCTTGGCAGTCAGCAAGAAGAAGATTTAGAGTTTATCAAGAGTCCAAATATGAAAGAGTACATAAAATCGTTTCCTTTTTCAAGGGGAGTGGACTTTTCGCGTTGTTATCCTAGTGCTGATCCATTGGCCGTAGATTTGTTGCAAAAGATGCTCGTTTTTAATCCAACTAAAAGAATTTCAGCGATGGAAGCACTTGAGCATCCCTTCATGAAAGAACTTTGCGACCCCAAAGATTTTCCACTAGCTCCCCTAGCCAACGATCTCGACGTAGATGAGAAGGTCGGAGTAGACACGATCAGAGAGATGATTTTGAAAGAGATGCTTTATTATCATCCCGAATCTTCTTTTTTATAG 1215 42.3 MAKSVEPPDGFKAKGKHYYTMWNTLFELDLKYVLIKPLGRGSYGVVCSSINRETSERVAIKKISNTFDHPINALRTLRELTLLRKIQHPNVIALKDVMMPTHRSSFKDVYLVYELMDTDLDRIINSSEPLSTDHCQYFLFQVFESDSCFDNFNFSASFSPTSLEFLFTNFLYVLFLHLQLLEGLKYIHSGNVLHRDLKPGNLLVNANCDLKICDFGLARTKQENNECMTTYVVTRWYRAPEILLGCDNYGTSIDMWSVGCIFAEILERKPIFPGTDNLNQLNLIIDLLGSQQEEDLEFIKSPNMKEYIKSFPFSRGVDFSRCYPSADPLAVDLLQKMLVFNPTKRISAMEALEHPFMKELCDPKDFPLAPLANDLDVDEKVGVDTIREMILKEMLYYHPESSFL 404
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 11281522 11282736 + Bma017365.1 Bma03g01015 79688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma03g01015 404 ProSitePatterns Protein kinases ATP-binding region signature. 38 62 IPR017441 GO:0005524
Bma03g01015 404 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 175 401 - -
Bma03g01015 404 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 11 143 - -
Bma03g01015 404 ProSitePatterns Serine/Threonine protein kinases active-site signature. 192 204 IPR008271 GO:0004672|GO:0006468
Bma03g01015 404 ProSiteProfiles Protein kinase domain profile. 32 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma03g01015 404 Pfam Protein kinase domain 175 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma03g01015 404 Pfam Protein kinase domain 32 144 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma03g01015 404 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 175 401 - -
Bma03g01015 404 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 11 143 - -
Bma03g01015 404 Gene3D Transferase(Phosphotransferase) domain 1 175 357 - -
Bma03g01015 404 Gene3D Phosphorylase Kinase; domain 1 12 151 - -
Bma03g01015 404 SUPERFAMILY Protein kinase-like (PK-like) 31 361 IPR011009 -
Bma03g01015 404 SMART serkin_6 32 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00681 Bma-Chr1:6251390 Bma03g01015 Bma-Chr3:11281522 0 dispersed
Bma01g00750 Bma-Chr1:6890977 Bma03g01015 Bma-Chr3:11281522 3.20E-180 dispersed
Bma03g01015 Bma-Chr3:11281522 Bma14g00601 Bma-Chr14:6518582 1.81E-122 dispersed
Bma03g01015 Bma-Chr3:11281522 Bma03g00980 Bma-Chr3:10453722 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66414 PF00069 Pkinase 2.60E-47 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma03g01015 - - jre:108993546 520.39