Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma03g01021 ATGTGGTTTCTCGGTACTAAAATGCCTGCTTTGTGGGGCAGAAAGCTGAGCAAGTGCGATCCACAACCTCCGCAGCAAAGCTTGAATGATGGCGAATGCAATCTCTCTAAATCATCGATCAAATTCAGCAAAAGGGGACCCAAGAACAAGCGTAACAGCTTTTATGAATGTTCGGCAATGGCGCGCAGGTCTAGAAAGGATCGTGATTCTTCTTTATTGGATGCCACTGCTTTTTCAGGCTTCTATTCAGACTTTGGGCGGGGAAGGGATCAATCTCTTCCTCTGCCATCGGTGCCTTCCTCTCCCAACTCTGGGATTAGACTTAAAGTAGAGATTAGTTCGACTTCTGTTTCTAGCTCGAGCGTTTCGGAATGCAAGAATGATAATCCAATTGCTCACAATCATGGCCAATCTTGTGGTTGCAGAGGACATGAAAATGGCATAAAAGAAATCGATTCTAGAACTCCAACTCCATCGAGAGGGTCCTCCAGTCCTAGACCGCTTCTTGTGGGTCATGCCACGATGGAAGCTGCAGCTCAAAGGTTAGAAGATGGGATGAGAGAATGTCACAAGCTTCCCCTACCCCCAGGGTCTCCTACCAATCCGTCTACGTTGCCCAAGACAAGAGATATGGCAGTCAATGAACTCAGAACTAGCAAACCAATGAGATGGAAGAAAGGTCGACTTCTTGGAAGAGGGACTTTTGGAAATGTTTATCTTGGATTTAATAGTACTAACGGGCATTTGTGCGCTATAAAAGAAGTTAGAAAAGTAAGTGATGATCATGCATCAAGAGAATGTCTAAAGCAACTTAACCAGGAGATAAATTTTCTCAGTCAGCTTTCACATAAAAACATTGTTAGATACTATGGTAGCGAAATGGGCGATGAAGCACTCTCAGTCTACTTGGAATATCTCTCTGGTGGCTCAATTCATAAATTACTTCAAGAATATGGCCCTTTTGAGGAGCCTGTCATACAAAATTACACCAGGCAGATTCTTTTGGGGCTTGCCTACTTGCGCGGAAGAAATACAATACATAGGGATATTAAAGGAGCTAACATCTTGGTCGATCCGAAAGGTGTGATCAAGTTGGCAGACTTTGGCATGGCTAAACATATTACAAATTTAAGTTCGATTCTTTCATTCAAAGGAAGTCCTTATTGGATGGCACCTGAGGTTGTTATGAATGCAAATGGGTATAGTACTGCAGTAGATATATGGAGCTTGGGTTGCACAATTCTAGAAATGGCAACGTCTAAACCTCCTTGGTGTGAATACGAAGGAGTGGCTGCCATTTTCAAAATTGGTAACAGCACAGATTTGCCTGAAATTCCTCACCATCTTTCCAACTGTGCAAAAAGCTTTATAAACCTGTGCTTGCAACGGGACCCGTCTGCCCGTCCTACACCAGAGGTATTATTAGACCACCCATTTGTTCAAGGTCAAATAAGGATCGATGATTTCAAAGCCACAGTGGATCTTCTTCCCTCGGCTTTTGACAGAAATTCTGCCTGCAACAAGGGAAGATTGATCACATCTTTGCCGGTATCTCCATGCTCAAGTCCACTGCGACAAAACCGACCCTCTCACAGCAGCCACTATCTCTCCCCGCCTCGTCCATACTATCCCAAGCTTAGAGAAAGTGGTTTCAATTTGAACGACTTCAAGCCTCACGAGATGAGCTCAAACAAGCTTTACACTCTTGATTTATTGGGTGAATCGCCTCTTCTTCGAGTTCAAATGCCAGGTGGGTCCCCAAAGACGAGATCTATTACAGGTAATGCATATTCTTGCCATGAAGGTGTAGTATGA 1815 43.91 MWFLGTKMPALWGRKLSKCDPQPPQQSLNDGECNLSKSSIKFSKRGPKNKRNSFYECSAMARRSRKDRDSSLLDATAFSGFYSDFGRGRDQSLPLPSVPSSPNSGIRLKVEISSTSVSSSSVSECKNDNPIAHNHGQSCGCRGHENGIKEIDSRTPTPSRGSSSPRPLLVGHATMEAAAQRLEDGMRECHKLPLPPGSPTNPSTLPKTRDMAVNELRTSKPMRWKKGRLLGRGTFGNVYLGFNSTNGHLCAIKEVRKVSDDHASRECLKQLNQEINFLSQLSHKNIVRYYGSEMGDEALSVYLEYLSGGSIHKLLQEYGPFEEPVIQNYTRQILLGLAYLRGRNTIHRDIKGANILVDPKGVIKLADFGMAKHITNLSSILSFKGSPYWMAPEVVMNANGYSTAVDIWSLGCTILEMATSKPPWCEYEGVAAIFKIGNSTDLPEIPHHLSNCAKSFINLCLQRDPSARPTPEVLLDHPFVQGQIRIDDFKATVDLLPSAFDRNSACNKGRLITSLPVSPCSSPLRQNRPSHSSHYLSPPRPYYPKLRESGFNLNDFKPHEMSSNKLYTLDLLGESPLLRVQMPGGSPKTRSITGNAYSCHEGVV 604
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 11339613 11347429 - Bma017369.3 Bma03g01021 79694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma03g01021 604 MobiDBLite consensus disorder prediction 188 208 - -
Bma03g01021 604 ProSiteProfiles Protein kinase domain profile. 224 480 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma03g01021 604 SMART serkin_6 224 480 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma03g01021 604 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 502 570 - -
Bma03g01021 604 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 3 502 570 - -
Bma03g01021 604 Pfam Protein kinase domain 225 480 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma03g01021 604 ProSitePatterns Protein kinases ATP-binding region signature. 230 253 IPR017441 GO:0005524
Bma03g01021 604 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 8 503 - -
Bma03g01021 604 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 3 8 503 - -
Bma03g01021 604 Gene3D Transferase(Phosphotransferase) domain 1 222 503 - -
Bma03g01021 604 MobiDBLite consensus disorder prediction 145 170 - -
Bma03g01021 604 SUPERFAMILY Protein kinase-like (PK-like) 223 542 IPR011009 -
Bma03g01021 604 CDD STKc_MEKK1_plant 223 480 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma03g01021 Bma15g00785 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g01021 Bma-Chr3:11339613 Bma15g00785 Bma-Chr15:16763102 0 dispersed
Bma03g01021 Bma-Chr3:11339613 Bma01g02638 Bma-Chr1:83891178 1.11E-78 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66415 PF00069 Pkinase 1.40E-68 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma03g01021 K04421 - vvi:100243772 613.609