Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma03g01074 ATGTTTTCAATTGGTGTACTTTTTGCATACGGTTATTACTACATGCACAAACTTAGCCAGGAGATGTTTGTTGATGTCGCAGGTGAAGATGATAGTAAAATTTCCTTTGGTCAAGTGAGGAGATTTTCCTGGCGTGAACTCCAACTTGCTACTGATAACTACAGGGAAGCCAACGTTATCGGGCAAGGAGGTTTTGGTAAGGTGTACAAAGGTGTCCTCTCAAACAACACCAAGGTTGCCGTCAAACGCATGATCAACTTGAACAGTCCTGGCGGGGAGGCTGCTTTTCTGAGAGAAGTTCAACTTATAAGCGTTGCCGTTCATAAAAATCTCCTCCGTTTGATCGGCTTTTGTACAACCTCAACTGAGAGAATCCTTGTTTATCCTTTCATGAAGAATCTCAGTGTTGCATACTGCTTGAGAGATTTGAAACCTGGGGAAAAAGGCTTGGACTGGCCTACTAGGAAGCGAATAGCATTTGGTGCAGCCCACGGTTTGGTGTATATGCACGAGGATTGCAATCCTAAAATCATCCATCGCGATCTAAAAGCTGCAAATATCCTGTTAGATGATGACTTTGAAGCTGTACTTGGAGATTTTGGGCTAGCAAAGCTAGTCGATACAAATTTGACGCATATTACAACTCAAGTGCGAGGTACAATGGGACACATTGCTCCCGAGTACTTGTCCACTGGTAAATCATCAGAAAAGACTGATGTATTTGGATATGGTGTAACACTTCTCGAACTTGTGACTGGTCAACGCGCAATTGATCTTTCACGTCTTGAAGAAGAGGAGGATGTTCTTTTGCTTGATCATATCAAGAAGTTGCTAAGAGAAAAGCGGCTCGATGACATTGTCGATAAAAGCTTGGAGAGCTACGATGCCGAAGAAGTGGAAACGATGATTCAAGTTGCCTTGCTCTGCACGCATAGTTTGCCCGAGCACCGGCCTGTGATGAGAGAAGTGGTGAGTCTTTTGGAAAGAGTTAACCTGGCAAAAAGATGGGGAGAGTGGATGGTTCTTGAAGAGACGAGGGATCAGCAGGTTTTGACAATGTCTCATCAGTTTGCTTGGGCGGAAGAGTCGACAACCCATGATCAAGAAGCTATACAACTGTCCATAGCAAGATAA 1134 43.92 MFSIGVLFAYGYYYMHKLSQEMFVDVAGEDDSKISFGQVRRFSWRELQLATDNYREANVIGQGGFGKVYKGVLSNNTKVAVKRMINLNSPGGEAAFLREVQLISVAVHKNLLRLIGFCTTSTERILVYPFMKNLSVAYCLRDLKPGEKGLDWPTRKRIAFGAAHGLVYMHEDCNPKIIHRDLKAANILLDDDFEAVLGDFGLAKLVDTNLTHITTQVRGTMGHIAPEYLSTGKSSEKTDVFGYGVTLLELVTGQRAIDLSRLEEEEDVLLLDHIKKLLREKRLDDIVDKSLESYDAEEVETMIQVALLCTHSLPEHRPVMREVVSLLERVNLAKRWGEWMVLEETRDQQVLTMSHQFAWAEESTTHDQEAIQLSIAR 377
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 13121150 13123328 + Bma017446.2 Bma03g01074 79747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma03g01074 377 Pfam Protein kinase domain 54 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma03g01074 377 Gene3D Phosphorylase Kinase; domain 1 23 130 - -
Bma03g01074 377 PANTHER LRR RECEPTOR-LIKE KINASE 2 377 - -
Bma03g01074 377 ProSitePatterns Protein kinases ATP-binding region signature. 60 82 IPR017441 GO:0005524
Bma03g01074 377 ProSitePatterns Serine/Threonine protein kinases active-site signature. 177 189 IPR008271 GO:0004672|GO:0006468
Bma03g01074 377 SMART serkin_6 54 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma03g01074 377 ProSiteProfiles Protein kinase domain profile. 54 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma03g01074 377 SUPERFAMILY Protein kinase-like (PK-like) 33 328 IPR011009 -
Bma03g01074 377 Gene3D Transferase(Phosphotransferase) domain 1 131 346 - -
Bma03g01074 377 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 2 377 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g01074 Bma-Chr3:13121150 Bma06g01441 Bma-Chr6:51107230 0 dispersed
Bma03g01074 Bma-Chr3:13121150 Bma02g00968 Bma-Chr2:49871952 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66418 PF00069 Pkinase 6.10E-43 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma03g01074 - - pper:18779407 595.119