Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma03g01116 ATGAGAATGGTCGCCGGAAAGAGGTACTACGGCGAGGATGTCTCCGACGAGGAAGAGGCCAACCAGTTTAGAGATATTATGAAAAAGCTCAACTCCAACGGCGGCGGGTCAAATCTTGCAGATTTCTTCCCATTTTTAAAATGGGTTTACCCCAATCATGAAAAAAATCTAATTGAGCTAGGATCGAGAATAGATGCGTTCTTGCAGAGATTGATCGACGAGCATCGGAAAGAGAGCGGGAAGAACAACATGATCGACCACCTACTTTCTTTGCAAGCATCACAACCAGATGATTACAGCGACGAGATTATCAAAGGCCTCATACTGGTCATCCTCCTAGCAGGGACAGATACTTCAGCGTTGACATTAGAATGGGCAATGGCCAATTTGCTCAACAATCCAGAGGTGCTGAAGAAGGCCATAGCCGAACTGGACTCAGAAATCGGACAAGAACGGCTGGTTGAAGAATCAGACACGCCTAAACTGAATTACCTGCAAGAAATCATATCGGAGACCCTCCGTCTGAACCCTGCAGCTCCACTTCTTTTGCCGCACTGCGCCTCCGACGACTGCACTATTGCGGGGTACGACGTGCCGAAGGATGCACTCGTTTTAGTCAATGCGTGGGCCATACACAGGGATCCCACCTTGTGGGAGGAGGCAATGAAATTCAAGCCGGAGAGGCATCACAGAGAGGAGGGTGAAGTGCAGAAGCTAATGCCATTTGGGTTGGGGAGAAGAGCTTGTCCTGGCATGGGAATGGCCCAGCGGGTGTTGGGATTGACTTTGGCTTCGCTGATTCAGTGCTTTGAGTGGGAGAGAGTTGGGGACGAAGAAGTTGACATGACTGAGGGTTCAGGCACTACCGCGCCGAAATTAGTGCCATTAGAGGCCATGTGCAAGCCTCGTCCAATCGTGGGTAAGGTTCTGCCACGACCCTAA 942 50.21 MRMVAGKRYYGEDVSDEEEANQFRDIMKKLNSNGGGSNLADFFPFLKWVYPNHEKNLIELGSRIDAFLQRLIDEHRKESGKNNMIDHLLSLQASQPDDYSDEIIKGLILVILLAGTDTSALTLEWAMANLLNNPEVLKKAIAELDSEIGQERLVEESDTPKLNYLQEIISETLRLNPAAPLLLPHCASDDCTIAGYDVPKDALVLVNAWAIHRDPTLWEEAMKFKPERHHREEGEVQKLMPFGLGRRACPGMGMAQRVLGLTLASLIQCFEWERVGDEEVDMTEGSGTTAPKLVPLEAMCKPRPIVGKVLPRP 313
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 14441014 14442039 + Bma017502.1 Bma03g01116 79789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma03g01116 313 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 242 251 IPR017972 GO:0005506|GO:0016705
Bma03g01116 313 Gene3D Cytochrome P450 1 302 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma03g01116 313 PRINTS P450 superfamily signature 114 131 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma03g01116 313 PRINTS P450 superfamily signature 249 260 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma03g01116 313 PRINTS P450 superfamily signature 240 249 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma03g01116 313 PRINTS P450 superfamily signature 167 178 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma03g01116 313 SUPERFAMILY Cytochrome P450 3 303 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma03g01116 313 PANTHER CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 2-RELATED 1 306 - -
Bma03g01116 313 Pfam Cytochrome P450 14 285 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma03g01116 313 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 1 306 - -
Bma03g01116 313 PRINTS E-class P450 group I signature 239 249 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma03g01116 313 PRINTS E-class P450 group I signature 123 149 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma03g01116 313 PRINTS E-class P450 group I signature 166 184 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma03g01116 313 PRINTS E-class P450 group I signature 249 272 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma03g01116 313 PRINTS E-class P450 group I signature 207 231 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma03g01116 313 PRINTS E-class P450 group I signature 103 120 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g01116 Bma-Chr3:14441014 Bma06g00369 Bma-Chr6:9214069 0 dispersed
Bma03g01116 Bma-Chr3:14441014 Bma03g01118 Bma-Chr3:14500165 8.42E-172 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma03g01116 K13260 - fve:101304511 429.869