Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma03g01128 ATGCCACCCCTAGATTACGAACAGCCGCTGATTCTCGGCGAAGGAGAAGAAGAAACAGCTTATGACTCCGGGCAGAAGGTTCTGGTGATCGGAATCGGCGAAGAAGACGGCGATGATTTTGCTGGAACGCCGCCGTTTTCGTGGAAAAAGCTATGGCTTTTTGCCGGACCTGGGTTTTTGATGAGCATAGCGTTTCTCGATCCGGGGAATTTGGAGGGAGATCTCCAGGCGGGGGCGATTGCTGGGTATTCGCTTTTGTGGCTGCTCATGTGGGCTACGGCTATGGGGCTCTTGGTGCAGCTTCTGGCTGCGAGACTCGGCGTGGCCACTGGGCGGCACTTGGCCGAGCTGTGTCGAGACGAGTACCCTAGATGGGCGAGTATGGTGCTGTGGGTTATGGCGGAGTTGGCTCTGATAGGGGCTGATATACAGGAGGTTATTGGGAGTGCCATTGCTCTTAAGATTTTGAGTAATGGGATTTTGCCTCTTTGGTCTGGTGTCATCATCACTGCTTTTGATTGCTTCATTTTTTTGTTTCTCGAAAACTATGGTGTAAGGAAATTGGAGGCAGTTTTTGCCATCCTTATCGCTACAATGGCGGTGTCATTTGCATGGATGTTTGGCAAAACAAAGCCTAGTGGAACCGAGCTTCTTCTTGGTATTTTGATTCCAAAACTAAACTCAAGAACGATTCGCCAGGCAGTTGGAGTAGTGGGTTGTATAATCATGCCCCACAATGTATTTTTACACTCGGCCCTCGTTCAATCGAGAGAGGTCGACCCTCGAAAGAGAGGCCGAGTTCAAGAAGCTCTCAGATACTACTCCATAGAGTCTACTGTCGCTCTCGTCCTCTCCTTCGTCATTAACCTATTTGTCACGACAGTTTTTGCAAAAGGATTTTATAACACAGAAATAGCGGATAGTATTGGCCTTATCAATGCAGGACAGTATCTTCAATCCAAGTATGGCGGTGGAATTTTCCCTATTTTATATATTTGGGGTATTGGTTTACTTGCAGCTGGTCAAAGTAGCACCATTACAGGTACTTATGCTGGACAGTTCATAATGGGCGGGTTTTTGAATTTGAGGCTGAAAAAATGGCTTAGAGCTTTGATCACTCGAAGCTGTGCGATTGTGCCGACGATGGCGGTTGCACTCGTGTTCGACTCGTCTGAGGATGCTTTGGATGTTCTGAATGAATGGCTGAATGTTCTTCAGTCTATTCAGATCCCTTTTGCTCTTATTCCTCTTCTCTATTTGGTCTCCAAGGAGCAGATTATGGGCACTTTTCGAATTGGCCGTCTTCTAAAGACGGTCTCTTGGCTAGTGGCTGCTTTAGTGATGGCCATTAATGGGTATCTTCTGATGGACTTCTTCTCCTCTGAAGTAAATGGAGTTTTTTTGGGCTCGGTGGTTTGCGCTTTCACGGCTGCATATGCTGCCTTCATCGTGTATCTCATCTCGGGAAGTATAACAGTTTCGTGGTGGAGGAACTTCACGCTGTCCAAGACCTCCACTGTTTTGGGACACTAG 1533 47.49 MPPLDYEQPLILGEGEEETAYDSGQKVLVIGIGEEDGDDFAGTPPFSWKKLWLFAGPGFLMSIAFLDPGNLEGDLQAGAIAGYSLLWLLMWATAMGLLVQLLAARLGVATGRHLAELCRDEYPRWASMVLWVMAELALIGADIQEVIGSAIALKILSNGILPLWSGVIITAFDCFIFLFLENYGVRKLEAVFAILIATMAVSFAWMFGKTKPSGTELLLGILIPKLNSRTIRQAVGVVGCIIMPHNVFLHSALVQSREVDPRKRGRVQEALRYYSIESTVALVLSFVINLFVTTVFAKGFYNTEIADSIGLINAGQYLQSKYGGGIFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWLRALITRSCAIVPTMAVALVFDSSEDALDVLNEWLNVLQSIQIPFALIPLLYLVSKEQIMGTFRIGRLLKTVSWLVAALVMAINGYLLMDFFSSEVNGVFLGSVVCAFTAAYAAFIVYLISGSITVSWWRNFTLSKTSTVLGH 510
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 14874165 14876199 + Bma017520.1 Bma03g01128 79801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma03g01128 510 PRINTS Natural resistance-associated macrophage protein signature 234 257 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bma03g01128 510 PRINTS Natural resistance-associated macrophage protein signature 130 156 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bma03g01128 510 PRINTS Natural resistance-associated macrophage protein signature 185 206 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bma03g01128 510 PRINTS Natural resistance-associated macrophage protein signature 341 360 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bma03g01128 510 PRINTS Natural resistance-associated macrophage protein signature 160 179 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bma03g01128 510 PRINTS Natural resistance-associated macrophage protein signature 369 386 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bma03g01128 510 PRINTS Natural resistance-associated macrophage protein signature 403 422 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bma03g01128 510 PANTHER METAL TRANSPORTER NRAMP3 PROTEIN 10 506 - -
Bma03g01128 510 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 49 427 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bma03g01128 510 Pfam Natural resistance-associated macrophage protein 72 433 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bma03g01128 510 Hamap Divalent metal cation transporter MntH [mntH]. 37 459 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bma03g01128 510 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 10 506 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma03g01128 Bma06g00366 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g02255 Bma-Chr1:79740480 Bma03g01128 Bma-Chr3:14874165 0 dispersed
Bma03g01128 Bma-Chr3:14874165 Bma10g00031 Bma-Chr10:380525 2.16E-27 dispersed
Bma06g00313 Bma-Chr6:5123020 Bma03g01128 Bma-Chr3:14874165 9.13E-100 transposed
Bma06g00653 Bma-Chr6:35092702 Bma03g01128 Bma-Chr3:14874165 5.94E-100 transposed
Bma15g00424 Bma-Chr15:4599585 Bma03g01128 Bma-Chr3:14874165 3.70E-99 transposed
Bma03g01128 Bma-Chr3:14874165 Bma06g00366 Bma-Chr6:9116207 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma03g01128 K21398 - pvy:116136387 838.565