Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma03g01144 ACCATGAGAGCTCATTATTCGAGCTTCTTTTTCTTTCTATCATTTCCTATATTTCTTCTTACGGTCGCCATTAATGGTTCCCCCAAAGCGCAAACTACAACTCACAGACGGGTTCTCCACCAGCCGCTTTTTCCGGATACCTCACCGCCACCGGATGTCTCCTTAACCCCACCACCACCCCCGCCGGTAGATCCTTCTTATTCCAATCCAGAGGACCAGCCCTTTTTTCACGAATCCCCTACAATACCGAACTCTGATCAGAATCAACCCCCTCCTTCGTCTTCAAACGTCAATTCTTCGATTCCGGAAGCTACTCAGCCGTCCAAACCGACGAAGACTGTTGCGATTGCAATCTCAGTCGGAATTGTCACTCTGGGAATGCTCTCTGCTCTTGCATTCTTCCTATATCGTCACCGGGGTAAACATGCCGGCGATTCTCAGAAGCTAGTCGGGGGCAACAATGGCGATAGATATCCAGAAGACTCAAGAGTACCGCCGTCCAGCTTTCTTTACATCGGCACCGTCGAACCGAGTCAAACCTCCGTCGTCGAACCTAAAACAGTAAACGGCGGCAGTAGCTCTCCTTATCGCAAGCTTAATTCCATTAAAATGTCGGATCGGTACCGTCCTAGTCCAGAATTGCAGCCGCTTCCACCTCTACCGAAACCACTGGTGGCGAAATCTGTGTCTCCATCGTCATCTTCTGACGACGAAAACCACGAGACGGCATTTCACACACCGCAAGGCTCGTCGGTGGTCAGTAACGAGGAAGGGTATGGTCAATCTGTAAACCATGTTTCGTCTGCTACTGTAAAATCCGATAAGAATTCAAATTTTTCTGTTCCTCATTCAAAAAGAACTTCTCCTAAATCCCGGCTTTCCGTATCGTCATCAAAGGTCGGTCAGTCTCCAGTGCCACCGTCGCCTCCTCCTCCTCCTCCAACTTCGCCTTTTCAGCAGCCTCAGCCTCAGATTTCTTCAAAGAGGCCGAAATTCTCAAAGCATCCACCTCCACCCAATTTGGCTCTCCTTCAATCACTAAGCAATTCGTCTCCAAATCCACAAATGGTCAGAAAACCTGGTCCTCCACATCCACCTCCACCTCCTCCTCCTCCTGCATTTCCACCATTGATTTCAAAGCCTAGGAAAGTTAAACCTTCAGAAAGGAGTGTACCCTCGACACCAACTCCATTGTCCTCGAAAGGAGTGTCTTGGAGCGCAACCAAGTCCAAATCTAACTCTCCTCCTAGTTCTGGATTATCAAATTATGTTGAACCAGTCCATAGAAGCGTAAGCTCGTCAGAGAAGCTTGAAGCAGACGATTCAGAAGGTGTTAAGCCGAAATTGAAGCCCCTGCATTGGGACAAAGTACGGGCCACTTCCGAGAGAGCCACAGTTTGGGACCAACTGAAATCAAGCTCATTCCAAGTAAACGAGGACATGATGGAAACTCTTTTTGGCTTTAACTCTGCAAATCCAGCCTCAAAAGAGCCTGCCAGAAAGACAATCTTCCCTTCGTCTATGGTGACGGAAAATAGGGTGTTGGACCCGAAGAAATCACAGAATATTGCAATCCTACTCAGAGCTCTAAACGTTACACACGATGAAGTGGCCGAAGCTCTTTCTGATGGTAATCCAGAATGCTTAGGCCCAGAGCTTTTGGAAACTCTTGTGAAAATGGCTCCAACCAAAGAAGAAGAGATAAAACTCAGAGACTATCGAGGCGACGTATCAAAACTTGGGTCTGCAGAGAGATTTCTCAAGGCGGTCCTCGATATCCCATTTGCCTTTAAAAGAGTTGAAGCCATGCTATACAGAGCCAATTTCGATACAGAAGTGAATTACCTGAGAAAAGCATTTCAAACACTGGAGGCAGCAAGTGATGAACTAAAGAATAGCCGGCTATTCCTTAAACTCCTCGAAGCTGTTCTCAAGACAGGAAATCGAATGAACGTGGGTACAAATCGCGGTGATGCAAAAGCTTTCAAGCTCGAGACTCTCTTAAAACTAGTCGATGTTAAAGGGACGGATGGCAAGACGACATTGCTTCACTTTGTCGTCCAAGAAATGATTCGATCCGAAGGTGAAGGTGAAGGTGGCGATACTATAAATGAGGACCAATTCAAGAAGCAAGGGTTGAAGATTGTGGCTGGGCTGAGCAGAGACCTCATCAATGTGAAAAAAGCAGCTGGTATGGACTCAGATGTGTTGAGTAGCTATGTATCCAAGCTGGAAATGGGTCTAGAGAAAGTAAGATTGGTTTTGCAAATTGGGAAGCCCGATATGCAGGCTACATTTTTCGACTCGATGAACATTTTTCTCAAGGAGGCCGAAGAGGAAATAGTTCGGATCAAAGCCGATGAAAAGAAAGCATTATGGCTTGTGAAAGGAGTGACTGAATACTTTCATGGGGATGCAGCAAAAGAAGAAGCTCATCCTCTGCGAATATTTATGATTGTTAAGGATTTCTTGAGCATATTGGATCAAGTGTGCAAAGAAGTGGGGAGGATGCAAGAAGTAGTGGTGGGTTCTGCTCGATCTTTTCGACTACAGTCATCCGTATCATTACCAGTCCTCAGCCGGTACAACGTGAGACAAGATCAAAGCTCCGACGAAGAAAGCTTATCGTCCTGA 2634 46.55 TMRAHYSSFFFFLSFPIFLLTVAINGSPKAQTTTHRRVLHQPLFPDTSPPPDVSLTPPPPPPVDPSYSNPEDQPFFHESPTIPNSDQNQPPPSSSNVNSSIPEATQPSKPTKTVAIAISVGIVTLGMLSALAFFLYRHRGKHAGDSQKLVGGNNGDRYPEDSRVPPSSFLYIGTVEPSQTSVVEPKTVNGGSSSPYRKLNSIKMSDRYRPSPELQPLPPLPKPLVAKSVSPSSSSDDENHETAFHTPQGSSVVSNEEGYGQSVNHVSSATVKSDKNSNFSVPHSKRTSPKSRLSVSSSKVGQSPVPPSPPPPPPTSPFQQPQPQISSKRPKFSKHPPPPNLALLQSLSNSSPNPQMVRKPGPPHPPPPPPPPAFPPLISKPRKVKPSERSVPSTPTPLSSKGVSWSATKSKSNSPPSSGLSNYVEPVHRSVSSSEKLEADDSEGVKPKLKPLHWDKVRATSERATVWDQLKSSSFQVNEDMMETLFGFNSANPASKEPARKTIFPSSMVTENRVLDPKKSQNIAILLRALNVTHDEVAEALSDGNPECLGPELLETLVKMAPTKEEEIKLRDYRGDVSKLGSAERFLKAVLDIPFAFKRVEAMLYRANFDTEVNYLRKAFQTLEAASDELKNSRLFLKLLEAVLKTGNRMNVGTNRGDAKAFKLETLLKLVDVKGTDGKTTLLHFVVQEMIRSEGEGEGGDTINEDQFKKQGLKIVAGLSRDLINVKKAAGMDSDVLSSYVSKLEMGLEKVRLVLQIGKPDMQATFFDSMNIFLKEAEEEIVRIKADEKKALWLVKGVTEYFHGDAAKEEAHPLRIFMIVKDFLSILDQVCKEVGRMQEVVVGSARSFRLQSSVSLPVLSRYNVRQDQSSDEESLSS 877
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 15432441 15435914 + Bma017542.1 Bma03g01144 79817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma03g01144 877 MobiDBLite consensus disorder prediction 389 429 - -
Bma03g01144 877 MobiDBLite consensus disorder prediction 303 320 - -
Bma03g01144 877 ProSiteProfiles Formin homology-2 (FH2) domain profile. 439 853 IPR015425 -
Bma03g01144 877 MobiDBLite consensus disorder prediction 144 165 - -
Bma03g01144 877 MobiDBLite consensus disorder prediction 181 448 - -
Bma03g01144 877 Pfam Formin Homology 2 Domain 445 827 IPR015425 -
Bma03g01144 877 Gene3D Formin, FH2 domain 446 847 IPR042201 -
Bma03g01144 877 MobiDBLite consensus disorder prediction 356 379 - -
Bma03g01144 877 MobiDBLite consensus disorder prediction 44 68 - -
Bma03g01144 877 MobiDBLite consensus disorder prediction 72 111 - -
Bma03g01144 877 MobiDBLite consensus disorder prediction 431 448 - -
Bma03g01144 877 SUPERFAMILY Formin homology 2 domain (FH2 domain) 362 839 - -
Bma03g01144 877 PANTHER FORMIN-RELATED 18 877 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Bma03g01144 877 MobiDBLite consensus disorder prediction 244 302 - -
Bma03g01144 877 SMART it6_source 439 842 IPR015425 -
Bma03g01144 877 MobiDBLite consensus disorder prediction 41 111 - -
Bma03g01144 877 MobiDBLite consensus disorder prediction 181 200 - -
Bma03g01144 877 PANTHER FORMIN-LIKE PROTEIN 6 18 877 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g01144 Bma-Chr3:15432441 Bma06g00347 Bma-Chr6:7727513 0 dispersed
Bma05g00280 Bma-Chr5:7821108 Bma03g01144 Bma-Chr3:15432441 7.00E-133 dispersed
Bma03g01142 Bma-Chr3:15288285 Bma03g01144 Bma-Chr3:15432441 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma03g01144 - - cmo:103497354 944.495